FFCP PHASE1:Hg19::chr7:4722965..4723005,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:4722965..4723005,- | |||
|description=CAGE_peak_at_chr7:4722965..4723005,- | |description=CAGE_peak_at_chr7:4722965..4723005,- | ||
|id=chr7:4722965..4723005,- | |id=chr7:4722965..4723005,- | ||
|ontology_enrichment_celltype=CL:0002274!1.73e-08!5;CL:0000457!1.73e-08!5;CL:0002191!1.73e-08!5;CL:0000097!1.73e-08!5;CL:0000831!1.73e-08!5;CL:0002028!1.73e-08!5 | |ontology_enrichment_celltype=CL:0002274!1.73e-08!5;CL:0000457!1.73e-08!5;CL:0002191!1.73e-08!5;CL:0000097!1.73e-08!5;CL:0000831!1.73e-08!5;CL:0002028!1.73e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.33e-32;5!CL:0000163;1.18e-18;9!CL:0000307;1.71e-14;3!CL:0000306;3.26e-11;4!CL:0002222;3.26e-11;4!CL:0002224;3.26e-11;4 | |ontology_enrichment_celltype_v019=CL:0000097;1.33e-32;5!CL:0000163;1.18e-18;9!CL:0000307;1.71e-14;3!CL:0000306;3.26e-11;4!CL:0002222;3.26e-11;4!CL:0002224;3.26e-11;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.05e-32,5;CL:0002028,1.05e-32,5;CL:0000163,1.03e-18,9;CL:0000068,2.09e-14,3;CL:0000069,2.09e-14,3;CL:0000307,2.09e-14,3;CL:0000377,2.09e-14,3;CL:0000306,3.42e-11,4;CL:0002222,3.42e-11,4;CL:0002224,3.42e-11,4 | |||
|ontology_enrichment_development_v019=CL:0000377;1.71e-14;3 | |ontology_enrichment_development_v019=CL:0000377;1.71e-14;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000997;1.81e-40;1!UBERON:0005056;1.81e-40;1!UBERON:0004176;1.81e-40;1!UBERON:0010077;3.26e-11;4!UBERON:0005389;3.26e-11;4!UBERON:0000484;3.26e-11;4!UBERON:0000965;3.26e-11;4!UBERON:0001803;3.26e-11;4!UBERON:0003126;5.86e-07;7!UBERON:0001005;5.86e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0000997;1.81e-40;1!UBERON:0005056;1.81e-40;1!UBERON:0004176;1.81e-40;1!UBERON:0010077;3.26e-11;4!UBERON:0005389;3.26e-11;4!UBERON:0000484;3.26e-11;4!UBERON:0000965;3.26e-11;4!UBERON:0001803;3.26e-11;4!UBERON:0003126;5.86e-07;7!UBERON:0001005;5.86e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,1.48e-40,1;UBERON:0005056,1.48e-40,1;UBERON:0010077,3.42e-11,4;UBERON:0005389,3.42e-11,4;UBERON:0000484,3.42e-11,4;UBERON:0002546,3.42e-11,4;UBERON:0000965,3.42e-11,4;UBERON:0001803,3.42e-11,4;UBERON:0003073,3.42e-11,4;UBERON:0005426,3.42e-11,4;UBERON:0003126,6.39e-07,7;UBERON:0001005,6.39e-07,7 | |||
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| ||
|short_description=p@chr7:4722965..4723005,- | |short_description=p@chr7:4722965..4723005,- | ||
}} | }} |
Latest revision as of 10:28, 31 July 2015
Short description: | p@chr7:4722965..4723005, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:4722965..4723005, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.05e-32 | 5 |
basophil mast progenitor cell | 1.05e-32 | 5 |
endocrine cell | 1.03e-18 | 9 |
duct epithelial cell | 2.09e-14 | 3 |
branched duct epithelial cell | 2.09e-14 | 3 |
tracheal epithelial cell | 2.09e-14 | 3 |
tracheoblast | 2.09e-14 | 3 |
crystallin accumulating cell | 3.42e-11 | 4 |
vertebrate lens cell | 3.42e-11 | 4 |
lens epithelial cell | 3.42e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 1.48e-40 | 1 |
external female genitalia | 1.48e-40 | 1 |
cuboidal epithelium | 3.42e-11 | 4 |
transparent eye structure | 3.42e-11 | 4 |
simple cuboidal epithelium | 3.42e-11 | 4 |
cranial placode | 3.42e-11 | 4 |
lens of camera-type eye | 3.42e-11 | 4 |
epithelium of lens | 3.42e-11 | 4 |
lens placode | 3.42e-11 | 4 |
lens vesicle | 3.42e-11 | 4 |
trachea | 6.39e-07 | 7 |
respiratory airway | 6.39e-07 | 7 |