FFCP PHASE1:Hg19::chr6:106546834..106546850,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=639 | |EntrezGene=639 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9346 | |HGNC=9346 | ||
|TSSclassifier=strong | |||
|UniProt=Q86WM7 | |UniProt=Q86WM7 | ||
|association_with_transcript=19bp_to_ENST00000369089,uc003pre.2_5end | |association_with_transcript=19bp_to_ENST00000369089,uc003pre.2_5end | ||
|cluster_id=chr6:106546834..106546850,+ | |||
|coexpression_cluster_id=C103 | |coexpression_cluster_id=C103 | ||
|description=CAGE_peak_4_at_PRDM1_5end | |description=CAGE_peak_4_at_PRDM1_5end | ||
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|ontology_enrichment_celltype=CL:0000791!3.20e-15!18;CL:0000789!3.20e-15!18;CL:0002420!3.20e-15!18;CL:0002419!3.20e-15!18;CL:0000790!3.20e-15!18;CL:0000084!2.84e-14!25;CL:0000827!2.84e-14!25;CL:0000838!9.95e-13!52;CL:0000542!3.38e-12!53;CL:0000051!3.38e-12!53;CL:0000738!1.80e-11!140;CL:0002087!2.69e-10!119;CL:0000625!1.04e-09!11;CL:0002031!1.70e-08!124 | |ontology_enrichment_celltype=CL:0000791!3.20e-15!18;CL:0000789!3.20e-15!18;CL:0002420!3.20e-15!18;CL:0002419!3.20e-15!18;CL:0000790!3.20e-15!18;CL:0000084!2.84e-14!25;CL:0000827!2.84e-14!25;CL:0000838!9.95e-13!52;CL:0000542!3.38e-12!53;CL:0000051!3.38e-12!53;CL:0000738!1.80e-11!140;CL:0002087!2.69e-10!119;CL:0000625!1.04e-09!11;CL:0002031!1.70e-08!124 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.09e-29;18!CL:0000789;3.09e-29;18!CL:0002419;3.09e-29;18!CL:0000084;1.66e-27;25!CL:0000625;7.27e-18;11!CL:0000542;4.98e-12;53!CL:0000624;9.61e-12;6!CL:0002087;2.19e-08;104!CL:0000623;7.64e-07;3 | |ontology_enrichment_celltype_v019=CL:0000791;3.09e-29;18!CL:0000789;3.09e-29;18!CL:0002419;3.09e-29;18!CL:0000084;1.66e-27;25!CL:0000625;7.27e-18;11!CL:0000542;4.98e-12;53!CL:0000624;9.61e-12;6!CL:0002087;2.19e-08;104!CL:0000623;7.64e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.02e-29,18;CL:0000789,2.02e-29,18;CL:0002420,2.02e-29,18;CL:0002419,2.02e-29,18;CL:0000790,2.02e-29,18;CL:0000084,1.18e-27,25;CL:0000827,1.18e-27,25;CL:0000838,7.31e-23,52;CL:0000542,3.03e-22,53;CL:0000051,3.03e-22,53;CL:0000738,4.12e-20,136;CL:0002087,3.70e-19,115;CL:0000625,3.70e-18,11;CL:0002031,1.77e-15,120;CL:0000988,1.75e-14,177;CL:0000037,2.00e-13,168;CL:0002032,4.72e-12,161;CL:0000837,4.72e-12,161;CL:0000624,9.97e-12,6;CL:0000623,7.68e-07,3;CL:0000825,7.68e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.09e-29;18!CL:0000051;4.98e-12;53 | |ontology_enrichment_development_v019=CL:0000790;3.09e-29;18!CL:0000051;4.98e-12;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.22e-14!115;UBERON:0000178!1.80e-11!15;UBERON:0000179!1.80e-11!15;UBERON:0000463!1.80e-11!15 | |ontology_enrichment_uberon=UBERON:0007023!1.22e-14!115;UBERON:0000178!1.80e-11!15;UBERON:0000179!1.80e-11!15;UBERON:0000463!1.80e-11!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.89e-22;15!UBERON:0000179;4.89e-22;15!UBERON:0000463;4.89e-22;15!UBERON:0002390;1.66e-11;32!UBERON:0002193;1.82e-07;42!UBERON:0000365;2.07e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0000178;4.89e-22;15!UBERON:0000179;4.89e-22;15!UBERON:0000463;4.89e-22;15!UBERON:0002390;1.66e-11;32!UBERON:0002193;1.82e-07;42!UBERON:0000365;2.07e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.45e-22,15;UBERON:0000179,9.45e-22,15;UBERON:0000463,9.45e-22,15;UBERON:0002390,8.97e-10,98;UBERON:0003061,8.97e-10,98;UBERON:0002193,1.71e-09,108;UBERON:0000365,1.33e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916960868975415,1.47781061009902,0.787107813136792,6.29382842958246,16.5046641181801,3.56077083626975,0,0.90361775633475,0.369754010166788,0,0,0,3.87796785972314,6.81851121398482,6.94434786290726,0,0.32389366601898,0.257575567634187,0.436194716338694,0,0,0.232429036905685,0,0,2.01384674625505,1.0246428261164,2.36482229888585,1.03423704220986,0,1.35426486594342,0.188242339542605,0.272906150057846,0.224723484445085,1.22433556948361,0,0.639337125799041,1.31940520074686,0,0.426224750532694,0.870627715885752,0,0,1.00499466102697,2.60741459210101,2.82345498116652,0,1.47311054395026,0.632924774881769,0.211255286311942,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0.574752439954483,0,0,3.41527781465669,0,2.29363936875137,0,3.92355994087075,0,25.5722701147983,12.9693551707224,26.5225933709367,8.86088425570594,6.19252306603822,2.8406868344084,7.79306913631645,9.24706792146941,46.2531274735494,38.9899654467173,66.3469466224288,7.55738786381483,6.76308607311367,1.31550323682941,0.829050053357545,6.0858648004361,0.593146252648242,1.07016331235885,0,3.17266159553185,10.3469533272519,13.4014703738226,18.7234572094432,4.45991580053735,1.95325036156926,2.85135613334512,3.91495309602209,7.55121005811069,3.74792179657038,5.44587679701239,4.92676798152628,24.5960226734174,17.383612725928,14.3376159843971,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.458426764241994,0,0.370784442784429,0,0,0,0,0,0.371457501329565,0,0.860234595106124,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,7.75560528296651,0.436094052142534,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.538168907066586,0,0.423863802319124,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0.168776332241266,0,0.252433774244115,0.184099797284599,0,0.355009592516614,0.10075209822764,0.169560592310488,0.193260853163297,1.09098448236334,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0.464367928031979,0,0.236613600079688,0.674338760312407,0.482022059766964,0.220587945464788,1.08939722046203,0.949082476444386,0.404493924480493,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.703702806881416,2.12953423864618,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0.839910640994298,1.41775097242386,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01753259188349,23.8407219844332,27.3847020071587,21.0482579498787,0,0,0,0,0,0.749007023947182,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0,20.263266560043,7.11856862701436,14.1947651878581,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0.657017248110473,1.03850885836724,0.116210378459959,0,0.40101294060657,0.736647911487171,0.229628896329213,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,1.72279661398852,0.650060246036521,0,0,0,0,0,0,0,0.255679882248303,0,0.330569830721956,0.192190067365106,2.16941611240793,0.30347334256665,0,0,0.6970372701606,0.308033580176089,1.59691809095107,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,1.21856744815642,1.05650146756755,0,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0.422215270595328,0,0,0,1.15466535270614,0,2.17781969722645,0.188287601553558,2.58303223602738,3.36942951335251,1.33029046061003,1.37834040124176,2.02979043692868,2.29391162142713,1.13929437434833,2.38231775457789,2.05681136543097,1.29694662238543,1.08006287447623,2.37937552888281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,1.75809815126273,0,0.445773537109913,0,0.47748896947538,0,0.614321404198464,0,0.281338832821026,0,4.28490072989575,0,0.796991953004279,0.828851746593443,0,0,1.10776324914963,0,0.179736702294654,0,0,1.1837208676432,2.3948309234694,0,0.969332746095218,0.556608588971108,0,0,0,2.17499872630438,0.1137934482855,0,0,0,0,0,0.885741385813839,0.482385754501632,3.05163472634166,0.110579259931225,0,0,0,1.53366118706464,0.461701551022782,0,0,0,0,0.957003479195758,0.641183153813036,0,0,0,0,0,0,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0.619202951523374,0,11.8608451472249,8.5259117873087,7.30953646538188,0.134802265961354,0,0.234264445725339,0.182454789215666,0.586993856796269,0,0,0,0,1.83241080922615,0,0.103688191397247,0,0,0,0,0,0,0,0.195984794828755,0,0.34945333648406,0,0.0967563312890851,0,0,0.678923115418936,0,0.451961481561065,0,0,0.253243183823515,0.195551382734803,0,0.640358984218058,0,0.864542502924636,0,0,0,0.248505071130865,2.12124631155116,0,0,0,0,1.20084057741958,0.273810757783986,0,0.429765441419957,9.72683210833464,0,0,1.43574604915363,0,0.429226048136571,0.669514372325618,0.134366944973453,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0.899895566206002,2.32140586367385,0.242998226632099,0,0.31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| ||
|short_description=p4@PRDM1 | |short_description=p4@PRDM1 | ||
}} | }} |
Latest revision as of 15:03, 19 September 2015
Short description: | p4@PRDM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PRDM1_5end |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | 19bp_to_ENST00000369089, uc003pre.2_5end |
EntrezGene: | PRDM1 |
HGNC: | 9346 |
UniProt: | Q86WM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.02e-29 | 18 |
alpha-beta T cell | 2.02e-29 | 18 |
immature T cell | 2.02e-29 | 18 |
mature T cell | 2.02e-29 | 18 |
immature alpha-beta T cell | 2.02e-29 | 18 |
T cell | 1.18e-27 | 25 |
pro-T cell | 1.18e-27 | 25 |
lymphoid lineage restricted progenitor cell | 7.31e-23 | 52 |
lymphocyte | 3.03e-22 | 53 |
common lymphoid progenitor | 3.03e-22 | 53 |
leukocyte | 4.12e-20 | 136 |
nongranular leukocyte | 3.70e-19 | 115 |
CD8-positive, alpha-beta T cell | 3.70e-18 | 11 |
hematopoietic lineage restricted progenitor cell | 1.77e-15 | 120 |
hematopoietic cell | 1.75e-14 | 177 |
hematopoietic stem cell | 2.00e-13 | 168 |
hematopoietic oligopotent progenitor cell | 4.72e-12 | 161 |
hematopoietic multipotent progenitor cell | 4.72e-12 | 161 |
CD4-positive, alpha-beta T cell | 9.97e-12 | 6 |
natural killer cell | 7.68e-07 | 3 |
pro-NK cell | 7.68e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 9.45e-22 | 15 |
haemolymphatic fluid | 9.45e-22 | 15 |
organism substance | 9.45e-22 | 15 |
hematopoietic system | 8.97e-10 | 98 |
blood island | 8.97e-10 | 98 |
hemolymphoid system | 1.71e-09 | 108 |
urothelium | 1.33e-07 | 5 |