FFCP PHASE1:Hg19::chr10:8094059..8094066,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:8094059..8094066,+ | |||
|coexpression_cluster_id=C194 | |coexpression_cluster_id=C194 | ||
|description=CAGE_peak_at_chr10:8094059..8094066,+ | |description=CAGE_peak_at_chr10:8094059..8094066,+ | ||
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|ontology_enrichment_celltype=CL:0002541!4.55e-16!3;CL:0000039!2.36e-07!7;CL:0000586!2.36e-07!7 | |ontology_enrichment_celltype=CL:0002541!4.55e-16!3;CL:0000039!2.36e-07!7;CL:0000586!2.36e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000632;1.26e-08;3!CL:0002327;8.85e-07;4 | |ontology_enrichment_celltype_v019=CL:0000632;1.26e-08;3!CL:0002327;8.85e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000632,1.21e-08,3;CL:0002327,7.70e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0005754;3.67e-23;1!UBERON:0008425;3.67e-23;1!UBERON:0007297;2.74e-12;2 | |ontology_enrichment_development_v019=UBERON:0005754;3.67e-23;1!UBERON:0008425;3.67e-23;1!UBERON:0007297;2.74e-12;2 | ||
|ontology_enrichment_disease=DOID:5093!3.60e-22!4;DOID:1612!3.60e-22!4;DOID:3095!4.04e-08!22;DOID:2994!4.04e-08!22 | |ontology_enrichment_disease=DOID:5093!3.60e-22!4;DOID:1612!3.60e-22!4;DOID:3095!4.04e-08!22;DOID:2994!4.04e-08!22 | ||
|ontology_enrichment_disease_v019=DOID:5093;3.12e-50;4!DOID:1612;3.12e-50;4 | |ontology_enrichment_disease_v019=DOID:5093;3.12e-50;4!DOID:1612;3.12e-50;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,1.88e-50,4;DOID:1612,1.88e-50,4 | |||
|ontology_enrichment_uberon=UBERON:0003124!3.52e-18!7;UBERON:0006947!6.51e-17!3;UBERON:0004054!6.51e-17!3;UBERON:0000476!4.55e-16!3;UBERON:0000920!4.55e-16!3;UBERON:0005904!8.22e-13!4;UBERON:0003135!6.70e-12!11;UBERON:0005631!5.58e-09!14;UBERON:0000158!5.58e-09!14;UBERON:0000310!6.32e-09!10;UBERON:0001443!4.07e-08!11;UBERON:0001000!6.96e-07!1;UBERON:0005352!6.96e-07!1;UBERON:0000998!8.21e-07!1;UBERON:0006868!8.21e-07!1;UBERON:0002084!9.15e-07!1;UBERON:0002082!9.15e-07!1;UBERON:0004706!9.15e-07!1 | |ontology_enrichment_uberon=UBERON:0003124!3.52e-18!7;UBERON:0006947!6.51e-17!3;UBERON:0004054!6.51e-17!3;UBERON:0000476!4.55e-16!3;UBERON:0000920!4.55e-16!3;UBERON:0005904!8.22e-13!4;UBERON:0003135!6.70e-12!11;UBERON:0005631!5.58e-09!14;UBERON:0000158!5.58e-09!14;UBERON:0000310!6.32e-09!10;UBERON:0001443!4.07e-08!11;UBERON:0001000!6.96e-07!1;UBERON:0005352!6.96e-07!1;UBERON:0000998!8.21e-07!1;UBERON:0006868!8.21e-07!1;UBERON:0002084!9.15e-07!1;UBERON:0002082!9.15e-07!1;UBERON:0004706!9.15e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;4.83e-30;3!UBERON:0004054;4.83e-30;3!UBERON:0001000;3.67e-23;1!UBERON:0000998;3.67e-23;1!UBERON:0006868;3.67e-23;1!UBERON:0005352;3.67e-23;1!UBERON:0005904;8.02e-23;4!UBERON:0000310;1.28e-20;10!UBERON:0001443;8.15e-19;11!UBERON:0000058;9.65e-10;10!UBERON:0003135;6.10e-09;11!UBERON:0001911;8.85e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0006947;4.83e-30;3!UBERON:0004054;4.83e-30;3!UBERON:0001000;3.67e-23;1!UBERON:0000998;3.67e-23;1!UBERON:0006868;3.67e-23;1!UBERON:0005352;3.67e-23;1!UBERON:0005904;8.02e-23;4!UBERON:0000310;1.28e-20;10!UBERON:0001443;8.15e-19;11!UBERON:0000058;9.65e-10;10!UBERON:0003135;6.10e-09;11!UBERON:0001911;8.85e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,4.84e-30,3;UBERON:0004054,4.84e-30,3;UBERON:0001000,2.62e-23,1;UBERON:0005352,2.62e-23,1;UBERON:0000998,5.13e-23,1;UBERON:0006868,5.13e-23,1;UBERON:0005904,8.02e-23,4;UBERON:0000310,1.05e-20,10;UBERON:0001443,6.80e-19,11;UBERON:0003135,6.10e-09,11;UBERON:0001911,7.70e-07,4;UBERON:0005333,7.70e-07,4;UBERON:0008425,7.70e-07,4;UBERON:0005311,7.70e-07,4 | |||
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|short_description=p@chr10:8094059..8094066,+ | |short_description=p@chr10:8094059..8094066,+ | ||
}} | }} |
Latest revision as of 15:53, 23 July 2015
Short description: | p@chr10:8094059..8094066, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:8094059..8094066, + |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 1.21e-08 | 3 |
mammary gland epithelial cell | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 4.84e-30 | 3 |
internal male genitalia | 4.84e-30 | 3 |
vas deferens | 2.62e-23 | 1 |
spermatic cord | 2.62e-23 | 1 |
seminal vesicle | 5.13e-23 | 1 |
seminal fluid secreting gland | 5.13e-23 | 1 |
duct of male reproductive system | 8.02e-23 | 4 |
breast | 1.05e-20 | 10 |
chest | 6.80e-19 | 11 |
male reproductive organ | 6.10e-09 | 11 |
mammary gland | 7.70e-07 | 4 |
mammary bud | 7.70e-07 | 4 |
mammary ridge | 7.70e-07 | 4 |
mammary placode | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.88e-50 | 4 |
breast cancer | 1.88e-50 | 4 |