FFCP PHASE1:Hg19::chr6:76203218..76203267,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27145 | |EntrezGene=27145 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21015 | |HGNC=21015 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z7B0 | |UniProt=Q7Z7B0 | ||
|association_with_transcript=186bp_to_ENST00000237172_5end | |association_with_transcript=186bp_to_ENST00000237172_5end | ||
|cluster_id=chr6:76203218..76203267,- | |||
|coexpression_cluster_id=C1515 | |coexpression_cluster_id=C1515 | ||
|description=CAGE_peak_2_at_FILIP1_5end | |description=CAGE_peak_2_at_FILIP1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000115!2.10e-10!35;CL:0002139!2.17e-10!24;CL:0005020!4.00e-08!6;CL:0002138!4.00e-08!6;CL:0005022!4.00e-08!6;CL:0002078!4.39e-07!44 | |ontology_enrichment_celltype=CL:0000115!2.10e-10!35;CL:0002139!2.17e-10!24;CL:0005020!4.00e-08!6;CL:0002138!4.00e-08!6;CL:0005022!4.00e-08!6;CL:0002078!4.39e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0000115;4.61e-09;36!CL:0002618;1.80e-08;3!CL:0002139;4.20e-08;24!CL:0002188;5.63e-08;5!CL:0002138;6.51e-07;6 | |ontology_enrichment_celltype_v019=CL:0000115;4.61e-09;36!CL:0002618;1.80e-08;3!CL:0002139;4.20e-08;24!CL:0002188;5.63e-08;5!CL:0002138;6.51e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.41e-11,36;CL:0002618,1.78e-08,3;CL:0002078,2.56e-08,45;CL:0002139,4.73e-08,24;CL:0002188,5.16e-08,5;CL:0005020,7.04e-07,6;CL:0002138,7.04e-07,6;CL:0005022,7.04e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006603;1.00e-09;65!CL:0005022;6.51e-07;6 | |ontology_enrichment_development_v019=UBERON:0006603;1.00e-09;65!CL:0005022;6.51e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.03e-48!115;UBERON:0004111!7.88e-16!241;UBERON:0000477!8.17e-14!286;UBERON:0000025!5.97e-12!194;UBERON:0003103!2.40e-10!69;UBERON:0000468!2.47e-08!659;UBERON:0001049!3.17e-08!57;UBERON:0005068!3.17e-08!57;UBERON:0006241!3.17e-08!57;UBERON:0007135!3.17e-08!57;UBERON:0007100!4.03e-08!27;UBERON:0000467!4.33e-08!625;UBERON:0000480!5.12e-08!626;UBERON:0003075!5.63e-08!86;UBERON:0007284!5.63e-08!86;UBERON:0000481!8.70e-08!347;UBERON:0002298!1.13e-07!8;UBERON:0000483!1.27e-07!309;UBERON:0002465!1.37e-07!10;UBERON:0001017!2.14e-07!82;UBERON:0000119!2.34e-07!312;UBERON:0005743!2.50e-07!86;UBERON:0002346!3.13e-07!90;UBERON:0002616!5.89e-07!59 | |ontology_enrichment_uberon=UBERON:0007023!1.03e-48!115;UBERON:0004111!7.88e-16!241;UBERON:0000477!8.17e-14!286;UBERON:0000025!5.97e-12!194;UBERON:0003103!2.40e-10!69;UBERON:0000468!2.47e-08!659;UBERON:0001049!3.17e-08!57;UBERON:0005068!3.17e-08!57;UBERON:0006241!3.17e-08!57;UBERON:0007135!3.17e-08!57;UBERON:0007100!4.03e-08!27;UBERON:0000467!4.33e-08!625;UBERON:0000480!5.12e-08!626;UBERON:0003075!5.63e-08!86;UBERON:0007284!5.63e-08!86;UBERON:0000481!8.70e-08!347;UBERON:0002298!1.13e-07!8;UBERON:0000483!1.27e-07!309;UBERON:0002465!1.37e-07!10;UBERON:0001017!2.14e-07!82;UBERON:0000119!2.34e-07!312;UBERON:0005743!2.50e-07!86;UBERON:0002346!3.13e-07!90;UBERON:0002616!5.89e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.26e-08;3!UBERON:0000946;1.26e-08;3!UBERON:0004151;6.33e-08;3!UBERON:0007023;6.98e-08;114!UBERON:0006947;7.68e-07;3!UBERON:0004054;7.68e-07;3!UBERON:0000160;7.68e-07;17 | |ontology_enrichment_uberon_v019=UBERON:0003978;1.26e-08;3!UBERON:0000946;1.26e-08;3!UBERON:0004151;6.33e-08;3!UBERON:0007023;6.98e-08;114!UBERON:0006947;7.68e-07;3!UBERON:0004054;7.68e-07;3!UBERON:0000160;7.68e-07;17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.81e-31,114;UBERON:0003103,1.35e-09,68;UBERON:0004876,1.51e-09,11;UBERON:0000080,8.44e-09,9;UBERON:0002120,8.44e-09,9;UBERON:0004875,8.44e-09,9;UBERON:0005721,8.44e-09,9;UBERON:0005754,8.44e-09,9;UBERON:0007297,8.44e-09,9;UBERON:0003978,1.18e-08,3;UBERON:0009751,1.18e-08,3;UBERON:0000946,1.18e-08,3;UBERON:0002523,1.18e-08,3;UBERON:0005983,1.18e-08,3;UBERON:0002165,1.18e-08,3;UBERON:0002062,1.18e-08,3;UBERON:0007280,1.18e-08,3;UBERON:0004151,5.58e-08,3;UBERON:0005103,2.88e-07,8;UBERON:0000083,2.88e-07,8;UBERON:0009201,2.88e-07,8;UBERON:0006553,2.88e-07,8;UBERON:0003074,2.88e-07,8;UBERON:0003060,2.88e-07,8;UBERON:0006947,5.07e-07,3;UBERON:0004054,5.07e-07,3;UBERON:0000160,7.31e-07,17 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0.417989933073621,15.2465887909904,26.3267034388166,76.3162997103448,2.01414658554573,3.04108842287405,0.732186172644509,0,1.62028389576352,18.1278448416682,6.51135180615892,4.50445921933289,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0.933633106199299,0.538842688278752,0.490385709340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69077727312324,0,0,0,0,0,2.95394953340702,0,0,0,0,0,0,0,0,0,0,0,0,1.29929802984966,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0.637938751653163,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4120015221269,1.70093705276516,14.2504504627412,10.7959076883203,0,0,0,0,0,0,0,0,0,0,2.26690225624989,0,0,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54188262097304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71381899160387,0.728163130497081,0,0,0,0,0,0,0.281338832821026,0,0,0,4.38345574152353,6.63081397274754,0,0,0,0,0,0,0,6.31317796076375,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0,0,0.442317039724898,0,1.75508317723178,0,0,3.84751292518985,0,0,0,0,2.23300811812344,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,1.99052386215701,5.57282656371037,1.22206028986725,0,0,0,0.067401132980677,8.82835412028668,0,0,0,0,1.97292201424695,0,0,4.99173979065055,0.300646838828985,0,0,0,0,0,3.13070500632772,0,0,0,0,2.44617335538842,0,0,0,0,3.9765496760252,0,2.25980740780532,0,0,0.189932387867636,0,0,6.61704283691993,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,12.5677080572514,6.87481272035051,14.3574604915363,0.998395002494955,1.71690419254628,3.34757186162809,5.1059439089912,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,1.33969702408637,0.996637174564964,0,0,0,3.57347663186684,2.64836788146173,0,0,0,0,0,0,0,0,1.75862680413699,1.32506888912221,0.258565912723101,1.19009341568421,0.171086837884329,0,5.12579580324934,14.3055917640696,2.48543433208317,1.48849806543585,0,0,0,1.08803560673895,1.2534494701135,1.22538230705385,1.63936315354902,0,0,0.366078794705889,0.3755727921195,0.573409195690071,0.665574309221114,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323474434190045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,2.03067886542995,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0.253663240775627,0.546974809018219,0.548257766857182,3.96968942711435,0,0,0.535701835878287,1.00885116665647,0.606965604236632,1.36597314810779,1.06442844195167,0,0,0.339848664884159,0,0,0,3.45369608542262,0,0,5.47895232305697,0,0,1.92986669276972,0,0,0,0,0,0,0,0.430227358820278,0,0,1.69354820076372,0,0,0,0,0,0,1.29485767437579,4.20917508110613,2.3196288626764,2.91426595835484,0,0,0,0,0,0,2.70109553377806,1.31135736302374,0,5.63841140033983,0,0.588925401344836,0,1.2679671827502,0,0.0939839179798536,0.257831551894309,0,0,0,0,2.19100916473955,1.37618785021362,0.573358332605805,0,0.0679914901909147,0,4.2322147241232,0.371995018166751,0,0,0,0,0.126698501011437,0,0,0,0,2.5006970412019,0,0,0.310298987585686,2.55880778281177,2.85677317756488,0,1.11734485732544,0,1.97306190662311,2.22328907854041,5.87835219321796,4.44903291410865,0.942928742204225,3.01233262649241,3.32660356546013,0,0,0,0,0,3.91172621385173,0.406896178315738,3.99454064511308,3.62292828463847,0 | |phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0.417989933073621,15.2465887909904,26.3267034388166,76.3162997103448,2.01414658554573,3.04108842287405,0.732186172644509,0,1.62028389576352,18.1278448416682,6.51135180615892,4.50445921933289,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0.933633106199299,0.538842688278752,0.490385709340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69077727312324,0,0,0,0,0,2.95394953340702,0,0,0,0,0,0,0,0,0,0,0,0,1.29929802984966,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0.637938751653163,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4120015221269,1.70093705276516,14.2504504627412,10.7959076883203,0,0,0,0,0,0,0,0,0,0,2.26690225624989,0,0,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54188262097304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71381899160387,0.728163130497081,0,0,0,0,0,0,0.281338832821026,0,0,0,4.38345574152353,6.63081397274754,0,0,0,0,0,0,0,6.31317796076375,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0,0,0.442317039724898,0,1.75508317723178,0,0,3.84751292518985,0,0,0,0,2.23300811812344,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,1.99052386215701,5.57282656371037,1.22206028986725,0,0,0,0.067401132980677,8.82835412028668,0,0,0,0,1.97292201424695,0,0,4.99173979065055,0.300646838828985,0,0,0,0,0,3.13070500632772,0,0,0,0,2.44617335538842,0,0,0,0,3.9765496760252,0,2.25980740780532,0,0,0.189932387867636,0,0,6.61704283691993,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,12.5677080572514,6.87481272035051,14.3574604915363,0.998395002494955,1.71690419254628,3.34757186162809,5.1059439089912,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,1.33969702408637,0.996637174564964,0,0,0,3.57347663186684,2.64836788146173,0,0,0,0,0,0,0,0,1.75862680413699,1.32506888912221,0.258565912723101,1.19009341568421,0.171086837884329,0,5.12579580324934,14.3055917640696,2.48543433208317,1.48849806543585,0,0,0,1.08803560673895,1.2534494701135,1.22538230705385,1.63936315354902,0,0,0.366078794705889,0.3755727921195,0.573409195690071,0.665574309221114,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323474434190045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,2.03067886542995,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0.253663240775627,0.546974809018219,0.548257766857182,3.96968942711435,0,0,0.535701835878287,1.00885116665647,0.606965604236632,1.36597314810779,1.06442844195167,0,0,0.339848664884159,0,0,0,3.45369608542262,0,0,5.47895232305697,0,0,1.92986669276972,0,0,0,0,0,0,0,0.430227358820278,0,0,1.69354820076372,0,0,0,0,0,0,1.29485767437579,4.20917508110613,2.3196288626764,2.91426595835484,0,0,0,0,0,0,2.70109553377806,1.31135736302374,0,5.63841140033983,0,0.588925401344836,0,1.2679671827502,0,0.0939839179798536,0.257831551894309,0,0,0,0,2.19100916473955,1.37618785021362,0.573358332605805,0,0.0679914901909147,0,4.2322147241232,0.371995018166751,0,0,0,0,0.126698501011437,0,0,0,0,2.5006970412019,0,0,0.310298987585686,2.55880778281177,2.85677317756488,0,1.11734485732544,0,1.97306190662311,2.22328907854041,5.87835219321796,4.44903291410865,0.942928742204225,3.01233262649241,3.32660356546013,0,0,0,0,0,3.91172621385173,0.406896178315738,3.99454064511308,3.62292828463847,0 | ||
|short_description=p2@FILIP1 | |short_description=p2@FILIP1 | ||
}} | }} |
Latest revision as of 20:53, 19 September 2015
Short description: | p2@FILIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FILIP1_5end |
Coexpression cluster: | C1515_Endothelial_schwannoma_Renal_cerebellum_lung_heart_diaphragm |
Association with transcript: | 186bp_to_ENST00000237172_5end |
EntrezGene: | FILIP1 |
HGNC: | 21015 |
UniProt: | Q7Z7B0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.41e-11 | 36 |
endothelial cell of umbilical vein | 1.78e-08 | 3 |
meso-epithelial cell | 2.56e-08 | 45 |
endothelial cell of vascular tree | 4.73e-08 | 24 |
glomerular endothelial cell | 5.16e-08 | 5 |
lymphangioblast | 7.04e-07 | 6 |
endothelial cell of lymphatic vessel | 7.04e-07 | 6 |
vascular lymphangioblast | 7.04e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.81e-31 | 114 |
compound organ | 1.35e-09 | 68 |
urogenital ridge | 1.51e-09 | 11 |
mesonephros | 8.44e-09 | 9 |
pronephros | 8.44e-09 | 9 |
nephrogenic cord | 8.44e-09 | 9 |
pronephric mesoderm | 8.44e-09 | 9 |
rostral part of nephrogenic cord | 8.44e-09 | 9 |
presumptive pronephric mesoderm | 8.44e-09 | 9 |
valve | 1.18e-08 | 3 |
cardiac mesenchyme | 1.18e-08 | 3 |
cardial valve | 1.18e-08 | 3 |
tunica intima | 1.18e-08 | 3 |
heart layer | 1.18e-08 | 3 |
endocardium | 1.18e-08 | 3 |
endocardial cushion | 1.18e-08 | 3 |
presumptive endocardium | 1.18e-08 | 3 |
cardiac chamber | 5.58e-08 | 3 |
mesonephric epithelium | 2.88e-07 | 8 |
mesonephric tubule | 2.88e-07 | 8 |
nephric duct | 2.88e-07 | 8 |
renal duct | 2.88e-07 | 8 |
mesonephric duct | 2.88e-07 | 8 |
pronephric duct | 2.88e-07 | 8 |
male genital duct | 5.07e-07 | 3 |
internal male genitalia | 5.07e-07 | 3 |
intestine | 7.31e-07 | 17 |