FFCP PHASE1:Hg19::chr19:51538150..51538203,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=43849 | |EntrezGene=43849 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6360 | |HGNC=6360 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UKR0,Q9UKR2 | |UniProt=Q9UKR0,Q9UKR2 | ||
|association_with_transcript=-2bp_to_ENST00000250351,ENST00000319590,NM_019598,NM_145894,NM_145895,uc002pvh.1,uc002pvi.1,uc002pvj.1_5end | |association_with_transcript=-2bp_to_ENST00000250351,ENST00000319590,NM_019598,NM_145894,NM_145895,uc002pvh.1,uc002pvi.1,uc002pvj.1_5end | ||
|cluster_id=chr19:51538150..51538203,- | |||
|coexpression_cluster_id=C60 | |coexpression_cluster_id=C60 | ||
|description=CAGE_peak_1_at_KLK12_5end | |description=CAGE_peak_1_at_KLK12_5end | ||
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|ontology_enrichment_celltype=CL:0000622!7.96e-17!5;CL:0000154!5.81e-14!6;CL:0002076!5.30e-13!43;CL:0000150!1.05e-12!9;CL:0002368!5.31e-11!13;CL:0002623!7.23e-11!3;CL:0000223!1.52e-08!59;CL:0002251!1.80e-08!21;CL:0002159!1.89e-08!13;CL:0000575!5.05e-08!2;CL:0000317!1.16e-07!2;CL:1000448!1.16e-07!2;CL:0002308!1.16e-07!2;CL:0002140!1.16e-07!2 | |ontology_enrichment_celltype=CL:0000622!7.96e-17!5;CL:0000154!5.81e-14!6;CL:0002076!5.30e-13!43;CL:0000150!1.05e-12!9;CL:0002368!5.31e-11!13;CL:0002623!7.23e-11!3;CL:0000223!1.52e-08!59;CL:0002251!1.80e-08!21;CL:0002159!1.89e-08!13;CL:0000575!5.05e-08!2;CL:0000317!1.16e-07!2;CL:1000448!1.16e-07!2;CL:0002308!1.16e-07!2;CL:0002140!1.16e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000622;1.39e-34;5!CL:0000154;8.04e-29;6!CL:0002623;1.23e-21;3!CL:0000150;3.36e-19;9!CL:0000575;1.56e-15;2!CL:0000317;9.40e-15;2!CL:1000448;9.40e-15;2!CL:0002308;9.40e-15;2!CL:0002140;9.40e-15;2!CL:0002252;1.53e-08;1!CL:0002159;2.79e-08;14 | |ontology_enrichment_celltype_v019=CL:0000622;1.39e-34;5!CL:0000154;8.04e-29;6!CL:0002623;1.23e-21;3!CL:0000150;3.36e-19;9!CL:0000575;1.56e-15;2!CL:0000317;9.40e-15;2!CL:1000448;9.40e-15;2!CL:0002308;9.40e-15;2!CL:0002140;9.40e-15;2!CL:0002252;1.53e-08;1!CL:0002159;2.79e-08;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0000622,1.25e-34,5;CL:0000154,7.36e-29,6;CL:0002623,1.10e-21,3;CL:0000150,3.18e-19,9;CL:0000575,1.56e-15,2;CL:0000317,9.41e-15,2;CL:1000448,9.41e-15,2;CL:0002308,9.41e-15,2;CL:0002140,9.41e-15,2;CL:0002252,1.48e-08,1;CL:0002159,2.79e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0009143;5.59e-09;1!UBERON:0006298;3.17e-08;1 | |ontology_enrichment_development_v019=UBERON:0009143;5.59e-09;1!UBERON:0006298;3.17e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;1.98e-08;1!DOID:3149;1.98e-08;1 | |ontology_enrichment_disease_v019=DOID:3151;1.98e-08;1!DOID:3149;1.98e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,1.84e-08,1;DOID:3149,1.84e-08,1 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001044,3.62e-29,6;UBERON:0003293,3.62e-29,6;UBERON:0003294,3.62e-29,6;UBERON:0010047,3.62e-29,6;UBERON:0000167,3.62e-29,6;UBERON:0000166,7.57e-20,22;UBERON:0003408,1.78e-17,10;UBERON:0000165,8.55e-15,29;UBERON:0000930,8.55e-15,29;UBERON:0002419,9.41e-15,2;UBERON:0007771,9.41e-15,2;UBERON:0003297,9.41e-15,2;UBERON:0001821,9.41e-15,2;UBERON:0003487,9.41e-15,2;UBERON:0001820,9.41e-15,2;UBERON:0005089,9.41e-15,2;UBERON:0005088,9.41e-15,2;UBERON:0001041,1.55e-13,87;UBERON:0001444,4.93e-13,49;UBERON:0000153,3.74e-12,62;UBERON:0007811,3.74e-12,62;UBERON:0001004,9.45e-12,74;UBERON:0000161,1.05e-11,36;UBERON:0000033,3.38e-11,56;UBERON:0001723,5.59e-11,3;UBERON:0001033,5.59e-11,3;UBERON:0010056,5.59e-11,3;UBERON:0001043,7.49e-11,3;UBERON:0009143,7.49e-11,3;UBERON:0002365,2.88e-10,31;UBERON:0002330,2.88e-10,31;UBERON:0003102,9.12e-10,99;UBERON:0004921,3.45e-09,118;UBERON:0002372,7.01e-09,1;UBERON:0001961,7.01e-09,1;UBERON:0001744,7.01e-09,1;UBERON:0001735,7.01e-09,1;UBERON:0001736,2.64e-08,1;UBERON:0006298,2.64e-08,1;UBERON:0000964,3.29e-08,4;UBERON:0010409,3.29e-08,4;UBERON:0004348,3.29e-08,4;UBERON:0005427,3.29e-08,4;UBERON:0006834,3.53e-08,1;UBERON:0001042,2.75e-07,10;UBERON:0009145,2.75e-07,10;UBERON:0004119,3.67e-07,160;UBERON:0000925,3.67e-07,160;UBERON:0006595,3.67e-07,160;UBERON:0005178,3.82e-07,34;UBERON:0002224,3.82e-07,34;UBERON:0001007,5.20e-07,145;UBERON:0001555,5.20e-07,145;UBERON:0007026,5.20e-07,145;UBERON:0005181,6.34e-07,35;UBERON:0000072,8.95e-07,47 | |||
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| ||
|short_description=p1@KLK12 | |short_description=p1@KLK12 | ||
}} | }} |
Latest revision as of 14:08, 19 September 2015
Short description: | p1@KLK12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KLK12_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | -2bp_to_ENST00000250351, ENST00000319590, NM_019598, NM_145894, NM_145895, uc002pvh.1, uc002pvi.1, uc002pvj.1_5end |
EntrezGene: | KLK12 |
HGNC: | 6360 |
UniProt: | Q9UKR0Q9UKR2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 1.25e-34 | 5 |
protein secreting cell | 7.36e-29 | 6 |
acinar cell of salivary gland | 1.10e-21 | 3 |
glandular epithelial cell | 3.18e-19 | 9 |
corneal epithelial cell | 1.56e-15 | 2 |
sebum secreting cell | 9.41e-15 | 2 |
epithelial cell of sweat gland | 9.41e-15 | 2 |
epithelial cell of skin gland | 9.41e-15 | 2 |
acinar cell of sebaceous gland | 9.41e-15 | 2 |
epithelial cell of esophagus | 1.48e-08 | 1 |
general ecto-epithelial cell | 2.79e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.84e-08 | 1 |
keratoacanthoma | 1.84e-08 | 1 |