FFCP PHASE1:Hg19::chr5:34586319..34586335,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:34586319..34586335,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr5:34586319..34586335,- | |description=CAGE_peak_at_chr5:34586319..34586335,- | ||
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|ontology_enrichment_celltype=CL:0002057!1.01e-39!42;CL:0000860!2.87e-36!45;CL:0002194!5.11e-28!63;CL:0000576!5.11e-28!63;CL:0000040!5.11e-28!63;CL:0000559!5.11e-28!63;CL:0002009!8.75e-27!65;CL:0000766!1.67e-25!76;CL:0000839!5.15e-24!70;CL:0000557!1.65e-23!71;CL:0000763!2.38e-13!112;CL:0000049!2.38e-13!112;CL:0002087!1.10e-12!119;CL:0000738!3.41e-11!140;CL:0002371!5.24e-11!591;CL:0000144!7.29e-11!625;CL:0002368!2.23e-10!13;CL:0002031!3.87e-10!124;CL:0000012!3.31e-09!682;CL:0000548!8.13e-09!679;CL:0000004!8.13e-09!679;CL:0000255!8.13e-09!679;CL:0002139!3.03e-08!24;CL:0000037!5.33e-07!172;CL:0000566!5.33e-07!172;CL:0000071!5.40e-07!18;CL:0002546!5.40e-07!18;CL:0000003!6.75e-07!722 | |ontology_enrichment_celltype=CL:0002057!1.01e-39!42;CL:0000860!2.87e-36!45;CL:0002194!5.11e-28!63;CL:0000576!5.11e-28!63;CL:0000040!5.11e-28!63;CL:0000559!5.11e-28!63;CL:0002009!8.75e-27!65;CL:0000766!1.67e-25!76;CL:0000839!5.15e-24!70;CL:0000557!1.65e-23!71;CL:0000763!2.38e-13!112;CL:0000049!2.38e-13!112;CL:0002087!1.10e-12!119;CL:0000738!3.41e-11!140;CL:0002371!5.24e-11!591;CL:0000144!7.29e-11!625;CL:0002368!2.23e-10!13;CL:0002031!3.87e-10!124;CL:0000012!3.31e-09!682;CL:0000548!8.13e-09!679;CL:0000004!8.13e-09!679;CL:0000255!8.13e-09!679;CL:0002139!3.03e-08!24;CL:0000037!5.33e-07!172;CL:0000566!5.33e-07!172;CL:0000071!5.40e-07!18;CL:0002546!5.40e-07!18;CL:0000003!6.75e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.65e-89;33!CL:0002057;4.65e-89;33!CL:0000473;4.91e-63;39!CL:0000234;4.91e-63;39!CL:0000576;1.73e-50;48!CL:0000766;4.42e-31;69!CL:0002087;1.56e-14;104!CL:0000763;2.49e-13;100!CL:0002393;6.65e-09;6!CL:0002397;6.65e-09;6!CL:0000738;2.67e-08;136!CL:0000307;5.07e-08;3 | |ontology_enrichment_celltype_v019=CL:0000860;4.65e-89;33!CL:0002057;4.65e-89;33!CL:0000473;4.91e-63;39!CL:0000234;4.91e-63;39!CL:0000576;1.73e-50;48!CL:0000766;4.42e-31;69!CL:0002087;1.56e-14;104!CL:0000763;2.49e-13;100!CL:0002393;6.65e-09;6!CL:0002397;6.65e-09;6!CL:0000738;2.67e-08;136!CL:0000307;5.07e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.88e-97,42;CL:0002057,1.88e-97,42;CL:0000473,1.45e-84,48;CL:0000234,1.45e-84,48;CL:0002194,1.63e-66,59;CL:0000576,1.63e-66,59;CL:0000040,1.63e-66,59;CL:0000559,1.63e-66,59;CL:0002009,3.47e-64,61;CL:0000839,5.72e-59,66;CL:0000557,5.12e-58,67;CL:0000766,1.15e-57,72;CL:0000763,1.12e-36,108;CL:0000049,1.12e-36,108;CL:0002087,3.98e-34,115;CL:0000738,3.68e-30,136;CL:0002031,4.51e-30,120;CL:0000037,2.67e-23,168;CL:0002032,9.88e-23,161;CL:0000837,9.88e-23,161;CL:0000988,8.20e-22,177;CL:0000134,1.15e-08,354;CL:0002320,2.24e-08,361;CL:0000068,5.07e-08,3;CL:0000069,5.07e-08,3;CL:0000307,5.07e-08,3;CL:0000377,5.07e-08,3;CL:0000219,2.35e-07,386;CL:0000048,8.63e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;1.31e-70;42!CL:0000049;6.00e-09;108!CL:0000377;5.07e-08;3 | |ontology_enrichment_development_v019=CL:0002057;1.31e-70;42!CL:0000049;6.00e-09;108!CL:0000377;5.07e-08;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.54e-19!80;UBERON:0001474!2.26e-17!86;UBERON:0002193!4.88e-17!112;UBERON:0003081!1.84e-16!216;UBERON:0002390!1.06e-15!102;UBERON:0003061!1.06e-15!102;UBERON:0002405!3.28e-15!115;UBERON:0004765!5.27e-15!101;UBERON:0001434!5.27e-15!101;UBERON:0002204!2.36e-12!167;UBERON:0000926!3.89e-09!448;UBERON:0004120!3.89e-09!448;UBERON:0006603!3.89e-09!448;UBERON:0000467!9.12e-08!625;UBERON:0000480!1.04e-07!626;UBERON:0001986!5.40e-07!18;UBERON:0004638!5.40e-07!18;UBERON:0004852!5.40e-07!18 | |ontology_enrichment_uberon=UBERON:0002371!1.54e-19!80;UBERON:0001474!2.26e-17!86;UBERON:0002193!4.88e-17!112;UBERON:0003081!1.84e-16!216;UBERON:0002390!1.06e-15!102;UBERON:0003061!1.06e-15!102;UBERON:0002405!3.28e-15!115;UBERON:0004765!5.27e-15!101;UBERON:0001434!5.27e-15!101;UBERON:0002204!2.36e-12!167;UBERON:0000926!3.89e-09!448;UBERON:0004120!3.89e-09!448;UBERON:0006603!3.89e-09!448;UBERON:0000467!9.12e-08!625;UBERON:0000480!1.04e-07!626;UBERON:0001986!5.40e-07!18;UBERON:0004638!5.40e-07!18;UBERON:0004852!5.40e-07!18 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.45e-50,76;UBERON:0001474,1.71e-46,82;UBERON:0004765,6.72e-42,90;UBERON:0002390,5.31e-41,98;UBERON:0003061,5.31e-41,98;UBERON:0002405,2.23e-40,93;UBERON:0001434,3.54e-37,100;UBERON:0002193,1.07e-36,108;UBERON:0002204,5.04e-20,167;UBERON:0003081,2.54e-18,203;UBERON:0000926,1.46e-10,315;UBERON:0004120,1.46e-10,315;UBERON:0006603,1.46e-10,315;UBERON:0002384,5.56e-08,371 | |||
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| ||
|short_description=p@chr5:34586319..34586335,- | |short_description=p@chr5:34586319..34586335,- | ||
}} | }} |
Latest revision as of 14:27, 30 July 2015
Short description: | p@chr5:34586319..34586335, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:34586319..34586335, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.88e-97 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.88e-97 | 42 |
defensive cell | 1.45e-84 | 48 |
phagocyte | 1.45e-84 | 48 |
monopoietic cell | 1.63e-66 | 59 |
monocyte | 1.63e-66 | 59 |
monoblast | 1.63e-66 | 59 |
promonocyte | 1.63e-66 | 59 |
macrophage dendritic cell progenitor | 3.47e-64 | 61 |
myeloid lineage restricted progenitor cell | 5.72e-59 | 66 |
granulocyte monocyte progenitor cell | 5.12e-58 | 67 |
myeloid leukocyte | 1.15e-57 | 72 |
myeloid cell | 1.12e-36 | 108 |
common myeloid progenitor | 1.12e-36 | 108 |
nongranular leukocyte | 3.98e-34 | 115 |
leukocyte | 3.68e-30 | 136 |
hematopoietic lineage restricted progenitor cell | 4.51e-30 | 120 |
hematopoietic stem cell | 2.67e-23 | 168 |
hematopoietic oligopotent progenitor cell | 9.88e-23 | 161 |
hematopoietic multipotent progenitor cell | 9.88e-23 | 161 |
hematopoietic cell | 8.20e-22 | 177 |
mesenchymal cell | 1.15e-08 | 354 |
connective tissue cell | 2.24e-08 | 361 |
duct epithelial cell | 5.07e-08 | 3 |
branched duct epithelial cell | 5.07e-08 | 3 |
tracheal epithelial cell | 5.07e-08 | 3 |
tracheoblast | 5.07e-08 | 3 |
motile cell | 2.35e-07 | 386 |
multi fate stem cell | 8.63e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.45e-50 | 76 |
bone element | 1.71e-46 | 82 |
skeletal element | 6.72e-42 | 90 |
hematopoietic system | 5.31e-41 | 98 |
blood island | 5.31e-41 | 98 |
immune system | 2.23e-40 | 93 |
skeletal system | 3.54e-37 | 100 |
hemolymphoid system | 1.07e-36 | 108 |
musculoskeletal system | 5.04e-20 | 167 |
lateral plate mesoderm | 2.54e-18 | 203 |
mesoderm | 1.46e-10 | 315 |
mesoderm-derived structure | 1.46e-10 | 315 |
presumptive mesoderm | 1.46e-10 | 315 |
connective tissue | 5.56e-08 | 371 |