FFCP PHASE1:Hg19::chr17:41177512..41177528,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:41177512..41177528,+ | |||
|description=CAGE_peak_at_chr17:41177512..41177528,+ | |description=CAGE_peak_at_chr17:41177512..41177528,+ | ||
|id=chr17:41177512..41177528,+ | |id=chr17:41177512..41177528,+ | ||
|ontology_enrichment_celltype=CL:0000133!6.18e-10!59;CL:0000221!1.70e-08!71;CL:0002319!2.00e-08!25;CL:0000128!6.45e-08!7;CL:0000126!6.45e-08!7;CL:0000127!6.45e-08!7;CL:0002453!6.45e-08!7;CL:0000047!1.27e-07!8;CL:0000039!6.18e-07!7;CL:0000586!6.18e-07!7;CL:0002322!6.76e-07!5 | |ontology_enrichment_celltype=CL:0000133!6.18e-10!59;CL:0000221!1.70e-08!71;CL:0002319!2.00e-08!25;CL:0000128!6.45e-08!7;CL:0000126!6.45e-08!7;CL:0000127!6.45e-08!7;CL:0002453!6.45e-08!7;CL:0000047!1.27e-07!8;CL:0000039!6.18e-07!7;CL:0000586!6.18e-07!7;CL:0002322!6.76e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.86e-20;7!CL:0000586;2.86e-20;7!CL:0002322;4.65e-19;5!CL:0002319;1.83e-17;25!CL:0000540;6.88e-16;6!CL:0000404;6.88e-16;6!CL:0002321;5.37e-15;15!CL:0000128;1.35e-08;7!CL:0000126;1.35e-08;7!CL:0000127;1.35e-08;7!CL:0000669;1.63e-08;4!CL:0000047;1.63e-08;2!CL:0000650;5.04e-08;2!CL:1000500;5.04e-08;2!CL:1000618;5.04e-08;2!CL:1001318;5.04e-08;2!CL:0002173;5.04e-08;2!CL:0000333;2.29e-07;5 | |ontology_enrichment_celltype_v019=CL:0000039;2.86e-20;7!CL:0000586;2.86e-20;7!CL:0002322;4.65e-19;5!CL:0002319;1.83e-17;25!CL:0000540;6.88e-16;6!CL:0000404;6.88e-16;6!CL:0002321;5.37e-15;15!CL:0000128;1.35e-08;7!CL:0000126;1.35e-08;7!CL:0000127;1.35e-08;7!CL:0000669;1.63e-08;4!CL:0000047;1.63e-08;2!CL:0000650;5.04e-08;2!CL:1000500;5.04e-08;2!CL:1000618;5.04e-08;2!CL:1001318;5.04e-08;2!CL:0002173;5.04e-08;2!CL:0000333;2.29e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.63e-22,8;CL:0000039,2.70e-20,7;CL:0000586,2.70e-20,7;CL:0000133,1.56e-19,59;CL:0002322,5.54e-19,5;CL:0002319,1.95e-17,25;CL:0000540,6.82e-16,6;CL:0000031,6.82e-16,6;CL:0000404,6.82e-16,6;CL:0000221,3.12e-15,72;CL:0000669,1.26e-08,4;CL:0000128,1.38e-08,7;CL:0000126,1.38e-08,7;CL:0000127,1.38e-08,7;CL:0002453,1.38e-08,7;CL:0000333,2.57e-08,41;CL:0000650,5.05e-08,2;CL:1000500,5.05e-08,2;CL:1000618,5.05e-08,2;CL:1001318,5.05e-08,2;CL:0002173,5.05e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.27e-18;10!UBERON:0005564;4.27e-18;10!CL:0000031;6.88e-16;6!CL:0000133;2.65e-11;59!CL:0000221;7.87e-08;72 | |ontology_enrichment_development_v019=UBERON:0009117;4.27e-18;10!UBERON:0005564;4.27e-18;10!CL:0000031;6.88e-16;6!CL:0000133;2.65e-11;59!CL:0000221;7.87e-08;72 | ||
|ontology_enrichment_disease=DOID:3095!4.60e-11!22;DOID:2994!4.60e-11!22 | |ontology_enrichment_disease=DOID:3095!4.60e-11!22;DOID:2994!4.60e-11!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.59e-31;22!DOID:2994;1.59e-31;22!DOID:171;3.02e-09;10 | |ontology_enrichment_disease_v019=DOID:3095;1.59e-31;22!DOID:2994;1.59e-31;22!DOID:171;3.02e-09;10 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,1.69e-31,22;DOID:2994,1.69e-31,22;DOID:171,3.34e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0002346!2.25e-24!90;UBERON:0003075!1.20e-22!86;UBERON:0007284!1.20e-22!86;UBERON:0000073!3.63e-21!94;UBERON:0001016!3.63e-21!94;UBERON:0005743!1.18e-20!86;UBERON:0001017!3.86e-20!82;UBERON:0000924!4.99e-19!173;UBERON:0006601!4.99e-19!173;UBERON:0001049!6.65e-18!57;UBERON:0005068!6.65e-18!57;UBERON:0006241!6.65e-18!57;UBERON:0007135!6.65e-18!57;UBERON:0004121!1.33e-17!169;UBERON:0003056!1.07e-16!61;UBERON:0002616!9.45e-15!59;UBERON:0000033!9.45e-15!123;UBERON:0000153!2.37e-14!129;UBERON:0007811!2.37e-14!129;UBERON:0000955!1.00e-13!69;UBERON:0006238!1.00e-13!69;UBERON:0002780!8.97e-12!41;UBERON:0001890!8.97e-12!41;UBERON:0006240!8.97e-12!41;UBERON:0003080!2.73e-11!42;UBERON:0001893!8.50e-11!34;UBERON:0001869!1.02e-10!32;UBERON:0002020!1.16e-10!34;UBERON:0003528!1.16e-10!34;UBERON:0002791!2.66e-10!33;UBERON:0007023!2.98e-10!115;UBERON:0000922!9.29e-10!612;UBERON:0000064!2.50e-09!219;UBERON:0000119!6.13e-09!312;UBERON:0000483!1.19e-08!309;UBERON:0003076!2.49e-08!15;UBERON:0003057!2.49e-08!15;UBERON:0004733!6.23e-08!12;UBERON:0002028!6.23e-08!12;UBERON:0007277!6.23e-08!12;UBERON:0000475!1.47e-07!365;UBERON:0000481!1.60e-07!347;UBERON:0000923!2.66e-07!604;UBERON:0005291!2.66e-07!604;UBERON:0006598!2.66e-07!604;UBERON:0002532!2.66e-07!604;UBERON:0002050!3.21e-07!605;UBERON:0005423!3.21e-07!605;UBERON:0000970!3.75e-07!20;UBERON:0004732!4.27e-07!13;UBERON:0000020!9.03e-07!23;UBERON:0000956!9.57e-07!25;UBERON:0000203!9.57e-07!25 | |ontology_enrichment_uberon=UBERON:0002346!2.25e-24!90;UBERON:0003075!1.20e-22!86;UBERON:0007284!1.20e-22!86;UBERON:0000073!3.63e-21!94;UBERON:0001016!3.63e-21!94;UBERON:0005743!1.18e-20!86;UBERON:0001017!3.86e-20!82;UBERON:0000924!4.99e-19!173;UBERON:0006601!4.99e-19!173;UBERON:0001049!6.65e-18!57;UBERON:0005068!6.65e-18!57;UBERON:0006241!6.65e-18!57;UBERON:0007135!6.65e-18!57;UBERON:0004121!1.33e-17!169;UBERON:0003056!1.07e-16!61;UBERON:0002616!9.45e-15!59;UBERON:0000033!9.45e-15!123;UBERON:0000153!2.37e-14!129;UBERON:0007811!2.37e-14!129;UBERON:0000955!1.00e-13!69;UBERON:0006238!1.00e-13!69;UBERON:0002780!8.97e-12!41;UBERON:0001890!8.97e-12!41;UBERON:0006240!8.97e-12!41;UBERON:0003080!2.73e-11!42;UBERON:0001893!8.50e-11!34;UBERON:0001869!1.02e-10!32;UBERON:0002020!1.16e-10!34;UBERON:0003528!1.16e-10!34;UBERON:0002791!2.66e-10!33;UBERON:0007023!2.98e-10!115;UBERON:0000922!9.29e-10!612;UBERON:0000064!2.50e-09!219;UBERON:0000119!6.13e-09!312;UBERON:0000483!1.19e-08!309;UBERON:0003076!2.49e-08!15;UBERON:0003057!2.49e-08!15;UBERON:0004733!6.23e-08!12;UBERON:0002028!6.23e-08!12;UBERON:0007277!6.23e-08!12;UBERON:0000475!1.47e-07!365;UBERON:0000481!1.60e-07!347;UBERON:0000923!2.66e-07!604;UBERON:0005291!2.66e-07!604;UBERON:0006598!2.66e-07!604;UBERON:0002532!2.66e-07!604;UBERON:0002050!3.21e-07!605;UBERON:0005423!3.21e-07!605;UBERON:0000970!3.75e-07!20;UBERON:0004732!4.27e-07!13;UBERON:0000020!9.03e-07!23;UBERON:0000956!9.57e-07!25;UBERON:0000203!9.57e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.00e-17;8!UBERON:0003135;4.78e-12;11!UBERON:0000991;4.56e-08;21!UBERON:0003567;5.04e-08;2!UBERON:0003838;5.04e-08;2!UBERON:0003586;5.04e-08;2!UBERON:0005169;5.04e-08;2!UBERON:0002321;5.04e-08;2!UBERON:0005215;5.04e-08;2!UBERON:0002303;5.04e-08;2!UBERON:0002319;5.04e-08;2!UBERON:0007625;7.98e-08;11!UBERON:0000013;2.29e-07;5!UBERON:0002410;2.29e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0000473;8.00e-17;8!UBERON:0003135;4.78e-12;11!UBERON:0000991;4.56e-08;21!UBERON:0003567;5.04e-08;2!UBERON:0003838;5.04e-08;2!UBERON:0003586;5.04e-08;2!UBERON:0005169;5.04e-08;2!UBERON:0002321;5.04e-08;2!UBERON:0005215;5.04e-08;2!UBERON:0002303;5.04e-08;2!UBERON:0002319;5.04e-08;2!UBERON:0007625;7.98e-08;11!UBERON:0000013;2.29e-07;5!UBERON:0002410;2.29e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.65e-17,8;UBERON:0003135,5.45e-12,11;UBERON:0000991,4.98e-08,21;UBERON:0009196,4.98e-08,21;UBERON:0009117,4.98e-08,21;UBERON:0005564,4.98e-08,21;UBERON:0003567,5.05e-08,2;UBERON:0003838,5.05e-08,2;UBERON:0003586,5.05e-08,2;UBERON:0005169,5.05e-08,2;UBERON:0002321,5.05e-08,2;UBERON:0005215,5.05e-08,2;UBERON:0002303,5.05e-08,2;UBERON:0002319,5.05e-08,2;UBERON:0007625,8.45e-08,11;UBERON:0004176,1.28e-07,22;UBERON:0000013,2.56e-07,5;UBERON:0002410,2.56e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.37129905888014,0,0,0,0,0,2.33930010345897,0.408001382488506,0.940364164434263,2.57612388417951,0.547497700291537,1.00434111675842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0.361439152384566,0,0,0,0,0.945348171640679,1.10864698731282,1.58102614247627,0.392937226493138,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0,0,0.949265659568129,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0.468642863667593,0,0,0,0,0,0,0,0.245668634623536,0.206651562351531,0,0,0,0,0,0,0,0.438977620880838,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,1.21973706129595,2.78312513475119,2.5562667431294,2.07322110030741,4.54177531576131,6.93456982244077,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0.686271241194102,0,0,0,0.0925884451585296,0.325808305310325,0,1.44331342025273,1.73895607462615,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,1.58390374586686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30323011489202,1.30139853857622,1.54657762555539,2.17771144934653,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0,0,0.315404830067869,0,0,0,0,0,0.368738337083406,0,0.587403472388222,1.71571711905428,0,0,0,0.303127571446259,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0.114814448164607,0,0.524497659837696,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,1.89662506280697,1.00337954770971,0,0,0.447749509444357,0,0,1.02580050046556,0,0,0,0,0,0,0,0,0.096670718292122,0.308097234229289,0,0,0.107420244868274,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0.282810863907425,0,0,0,0,0.578775534266688,0.655894752046633,0.405820753925408,0.30982349809975,0,0.286822704408103,0,0,0,0.211107635297664,0,0.75894634753143,0,0.192444225451024,0,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24330549367694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.849523652246594,0,0,0,0,0.307160702099232,0.994147647766298,0.422008249231538,0,0,0.844501632511974,0.398495976502139,0.276283915531148,0,1.63629892003448,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,1.37897349296586,0,0.173624994933292,0.885741385813839,0.482385754501632,0,0.221158519862449,0.295547618953547,0.438770794307945,0,0,0.230850775511391,0,3.68902247020896,0,4.23724750495832,0,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0.432777279484182,0,0,0,0,0,0,0.471807930864739,0,0.468528891450678,0,0,0,0.394584402849391,0,0.61214552326098,0.063186579628488,0.450970258243478,0.518440956986236,0,0,0,0,0,0,0.173559738335131,0,0,0.34945333648406,0.687944129886466,0,0,0,0,1.1473296469895,0.225980740780532,0,0,0.316553979779393,0,0,0,0,0,1.37443915399099,1.88754497648161,0,1.24252535565433,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,2.57205037544031,3.02586760513914,3.73896304226267,0,0,0.303747783290123,0,0.157611414598396,0.209818352539992,0.950403028674658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.554645257684261,0.683060432355218,0.138348634936231,0,0,0.285465333544967,0,0,2.3187364577732,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06946491128764,1.1860729253635,2.83078695340614,0.109209638192014,0.33946505990805,1.2754495206101,3.84200869202907,0,0,0,3.20228299314188,0,0,0.128458450192919,0,0,0.205116364240755,0.756215088665154,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0.270150338473579,0,0,0.19024743058172,0,0,0,0,0,0,0,1.82089681270989,0,0,0,0,0.203909198930495,0.263091094251396,0.118193840883968,0,0.39246546425257,1.09980912941201,0,0,0.215927591218621,0,0.857718530119876,0.158013611732727,0.116241425368125,0.173858272302579,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0.935757853848423,0.397901550322736,1.54596118010839,0.22589216407792,0.659643100472575,0.301925687133347,0.0771741581079447,0,0,0.245148321753905,0,0.196308467114945,0,0.8453114551668,0,0,0,0,0,0,0,0,0.458729283404541,0,0.788857810965923,0.135982980381829,0,0,0,0,0,3.28032704571205,5.13548188229369,1.52038201213724,3.87557553019531,4.54269588951453,2.2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| ||
|short_description=p@chr17:41177512..41177528,+ | |short_description=p@chr17:41177512..41177528,+ | ||
}} | }} |
Latest revision as of 17:11, 25 July 2015
Short description: | p@chr17:41177512..41177528, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:41177512..41177528, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.63e-22 | 8 |
germ line cell | 2.70e-20 | 7 |
germ cell | 2.70e-20 | 7 |
neurectodermal cell | 1.56e-19 | 59 |
embryonic stem cell | 5.54e-19 | 5 |
neural cell | 1.95e-17 | 25 |
neuron | 6.82e-16 | 6 |
neuroblast | 6.82e-16 | 6 |
electrically signaling cell | 6.82e-16 | 6 |
ectodermal cell | 3.12e-15 | 72 |
pericyte cell | 1.26e-08 | 4 |
oligodendrocyte | 1.38e-08 | 7 |
macroglial cell | 1.38e-08 | 7 |
astrocyte | 1.38e-08 | 7 |
oligodendrocyte precursor cell | 1.38e-08 | 7 |
migratory neural crest cell | 2.57e-08 | 41 |
mesangial cell | 5.05e-08 | 2 |
kidney interstitial cell | 5.05e-08 | 2 |
juxtaglomerular complex cell | 5.05e-08 | 2 |
renal interstitial pericyte | 5.05e-08 | 2 |
extraglomerular mesangial cell | 5.05e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 9.65e-17 | 8 |
male reproductive organ | 5.45e-12 | 11 |
gonad | 4.98e-08 | 21 |
indifferent external genitalia | 4.98e-08 | 21 |
indifferent gonad | 4.98e-08 | 21 |
gonad primordium | 4.98e-08 | 21 |
abdomen connective tissue | 5.05e-08 | 2 |
abdominal segment connective tissue | 5.05e-08 | 2 |
trunk connective tissue | 5.05e-08 | 2 |
interstitial tissue | 5.05e-08 | 2 |
extraglomerular mesangium | 5.05e-08 | 2 |
kidney interstitium | 5.05e-08 | 2 |
juxtaglomerular apparatus | 5.05e-08 | 2 |
mesangium | 5.05e-08 | 2 |
pigment epithelium of eye | 8.45e-08 | 11 |
external genitalia | 1.28e-07 | 22 |
sympathetic nervous system | 2.56e-07 | 5 |
autonomic nervous system | 2.56e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.69e-31 | 22 |
germ cell cancer | 1.69e-31 | 22 |
neuroectodermal tumor | 3.34e-09 | 10 |