FFCP PHASE1:Hg19::chr3:99691212..99691254,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:99691212..99691254,+ | |||
|coexpression_cluster_id=C73 | |coexpression_cluster_id=C73 | ||
|description=CAGE_peak_at_chr3:99691212..99691254,+ | |description=CAGE_peak_at_chr3:99691212..99691254,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002253!1.12e-07!2;CL:0001014!1.20e-07!2;CL:0001016!1.20e-07!2 | |ontology_enrichment_celltype=CL:0002253!1.12e-07!2;CL:0001014!1.20e-07!2;CL:0001016!1.20e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002253;9.18e-26;2!CL:0002563;1.29e-13;4 | |ontology_enrichment_celltype_v019=CL:0002253;9.18e-26;2!CL:0002563;1.29e-13;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002253,9.18e-26,2;CL:0002563,1.29e-13,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!1.47e-26!2;UBERON:0002757!1.47e-26!2;UBERON:0010134!1.47e-26!2;UBERON:0002784!1.47e-26!2;UBERON:0005408!1.47e-26!2;UBERON:0001899!1.47e-26!2;UBERON:0003296!8.59e-14!4;UBERON:0010133!8.59e-14!4;UBERON:0002022!2.07e-13!1;UBERON:0001894!2.88e-08!7;UBERON:0006222!2.88e-08!7;UBERON:0005743!2.89e-08!86;UBERON:0002360!1.64e-07!2;UBERON:0000094!1.64e-07!2;UBERON:0007645!1.64e-07!2;UBERON:0000073!2.03e-07!94;UBERON:0001016!2.03e-07!94;UBERON:0002148!2.12e-07!2;UBERON:0009662!2.12e-07!2 | |ontology_enrichment_uberon=UBERON:0001905!1.47e-26!2;UBERON:0002757!1.47e-26!2;UBERON:0010134!1.47e-26!2;UBERON:0002784!1.47e-26!2;UBERON:0005408!1.47e-26!2;UBERON:0001899!1.47e-26!2;UBERON:0003296!8.59e-14!4;UBERON:0010133!8.59e-14!4;UBERON:0002022!2.07e-13!1;UBERON:0001894!2.88e-08!7;UBERON:0006222!2.88e-08!7;UBERON:0005743!2.89e-08!86;UBERON:0002360!1.64e-07!2;UBERON:0000094!1.64e-07!2;UBERON:0007645!1.64e-07!2;UBERON:0000073!2.03e-07!94;UBERON:0001016!2.03e-07!94;UBERON:0002148!2.12e-07!2;UBERON:0009662!2.12e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;9.38e-99;2!UBERON:0002757;9.38e-99;2!UBERON:0010134;9.38e-99;2!UBERON:0005408;9.38e-99;2!UBERON:0001899;9.38e-99;2!UBERON:0003296;4.00e-50;4!UBERON:0010133;4.00e-50;4!UBERON:0002784;4.00e-50;4!UBERON:0001894;3.16e-29;7!UBERON:0001052;1.29e-13;4!UBERON:0001242;1.29e-13;4!UBERON:0001262;1.29e-13;4!UBERON:0004786;1.29e-13;4!UBERON:0004808;1.29e-13;4!UBERON:0001277;1.29e-13;4!UBERON:0004907;3.60e-11;5!UBERON:0000485;2.35e-08;7!UBERON:0003929;2.35e-08;7!UBERON:0003350;1.80e-07;8!UBERON:0001155;8.85e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0001905;9.38e-99;2!UBERON:0002757;9.38e-99;2!UBERON:0010134;9.38e-99;2!UBERON:0005408;9.38e-99;2!UBERON:0001899;9.38e-99;2!UBERON:0003296;4.00e-50;4!UBERON:0010133;4.00e-50;4!UBERON:0002784;4.00e-50;4!UBERON:0001894;3.16e-29;7!UBERON:0001052;1.29e-13;4!UBERON:0001242;1.29e-13;4!UBERON:0001262;1.29e-13;4!UBERON:0004786;1.29e-13;4!UBERON:0004808;1.29e-13;4!UBERON:0001277;1.29e-13;4!UBERON:0004907;3.60e-11;5!UBERON:0000485;2.35e-08;7!UBERON:0003929;2.35e-08;7!UBERON:0003350;1.80e-07;8!UBERON:0001155;8.85e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,9.38e-99,2;UBERON:0002757,9.38e-99,2;UBERON:0010134,9.38e-99,2;UBERON:0005408,9.38e-99,2;UBERON:0001899,9.38e-99,2;UBERON:0003296,4.00e-50,4;UBERON:0010133,4.00e-50,4;UBERON:0002784,4.00e-50,4;UBERON:0001894,3.16e-29,7;UBERON:0006222,3.16e-29,7;UBERON:0001052,1.29e-13,4;UBERON:0001242,1.29e-13,4;UBERON:0001262,1.29e-13,4;UBERON:0004786,1.29e-13,4;UBERON:0004808,1.29e-13,4;UBERON:0001277,1.29e-13,4;UBERON:0004907,3.60e-11,5;UBERON:0003350,1.80e-07,8;UBERON:0000955,2.91e-07,68;UBERON:0006238,2.91e-07,68;UBERON:0001155,8.85e-07,9;UBERON:0000485,8.85e-07,9 | |||
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|short_description=p@chr3:99691212..99691254,+ | |short_description=p@chr3:99691212..99691254,+ | ||
}} | }} |
Latest revision as of 00:14, 30 July 2015
Short description: | p@chr3:99691212..99691254, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:99691212..99691254, + |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 9.18e-26 | 2 |
intestinal epithelial cell | 1.29e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
pineal body | 9.38e-99 | 2 |
regional part of epithalamus | 9.38e-99 | 2 |
secretory circumventricular organ | 9.38e-99 | 2 |
circumventricular organ | 9.38e-99 | 2 |
epithalamus | 9.38e-99 | 2 |
gland of diencephalon | 4.00e-50 | 4 |
neuroendocrine gland | 4.00e-50 | 4 |
regional part of diencephalon | 4.00e-50 | 4 |
diencephalon | 3.16e-29 | 7 |
future diencephalon | 3.16e-29 | 7 |
rectum | 1.29e-13 | 4 |
intestinal mucosa | 1.29e-13 | 4 |
wall of intestine | 1.29e-13 | 4 |
gastrointestinal system mucosa | 1.29e-13 | 4 |
gastrointestinal system epithelium | 1.29e-13 | 4 |
intestinal epithelium | 1.29e-13 | 4 |
lower digestive tract | 3.60e-11 | 5 |
epithelium of mucosa | 1.80e-07 | 8 |
brain | 2.91e-07 | 68 |
future brain | 2.91e-07 | 68 |
colon | 8.85e-07 | 9 |
simple columnar epithelium | 8.85e-07 | 9 |