FFCP PHASE1:Hg19::chr4:72897809..72897820,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10886 | |EntrezGene=10886 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4525 | |HGNC=4525 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=288bp_to_uc010iig.1_5end | |association_with_transcript=288bp_to_uc010iig.1_5end | ||
|cluster_id=chr4:72897809..72897820,+ | |||
|coexpression_cluster_id=C145 | |coexpression_cluster_id=C145 | ||
|description=CAGE_peak_4_at_NPFFR2_5end | |description=CAGE_peak_4_at_NPFFR2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002577;1.04e-10;3!CL:0000306;2.35e-08;4!CL:0002222;2.35e-08;4!CL:0002224;2.35e-08;4!CL:0000333;4.79e-07;5 | |ontology_enrichment_celltype_v019=CL:0002577;1.04e-10;3!CL:0000306;2.35e-08;4!CL:0002222;2.35e-08;4!CL:0002224;2.35e-08;4!CL:0000333;4.79e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002577,9.90e-11,3;CL:0000306,2.43e-08,4;CL:0002222,2.43e-08,4;CL:0002224,2.43e-08,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;9.99e-30;1!DOID:4549;9.99e-30;1!DOID:5861;9.99e-30;1!DOID:6496;9.99e-30;1 | |ontology_enrichment_disease_v019=DOID:3371;9.99e-30;1!DOID:4549;9.99e-30;1!DOID:5861;9.99e-30;1!DOID:6496;9.99e-30;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,9.99e-30,1;DOID:4549,9.99e-30,1;DOID:5861,9.99e-30,1;DOID:6496,9.99e-30,1 | |||
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| ||
|short_description=p4@NPFFR2 | |short_description=p4@NPFFR2 | ||
}} | }} |
Latest revision as of 12:11, 18 September 2015
Short description: | p4@NPFFR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NPFFR2_5end |
Coexpression cluster: | C145_neuroblastoma_peripheral_neuroectodermal_neuroepithelioma_carcinoid_adult_extraskeletal |
Association with transcript: | 288bp_to_uc010iig.1_5end |
EntrezGene: | NPFFR2 |
HGNC: | 4525 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 9.90e-11 | 3 |
crystallin accumulating cell | 2.43e-08 | 4 |
vertebrate lens cell | 2.43e-08 | 4 |
lens epithelial cell | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 7.42e-11 | 3 |
skeletal tissue | 7.42e-11 | 3 |
placenta | 2.26e-08 | 4 |
allantois | 2.26e-08 | 4 |
cuboidal epithelium | 2.43e-08 | 4 |
transparent eye structure | 2.43e-08 | 4 |
simple cuboidal epithelium | 2.43e-08 | 4 |
cranial placode | 2.43e-08 | 4 |
lens of camera-type eye | 2.43e-08 | 4 |
epithelium of lens | 2.43e-08 | 4 |
lens placode | 2.43e-08 | 4 |
lens vesicle | 2.43e-08 | 4 |
sympathetic nervous system | 4.79e-07 | 5 |
autonomic nervous system | 4.79e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.99e-30 | 1 |
extraosseous chondrosarcoma | 9.99e-30 | 1 |
myxoid chondrosarcoma | 9.99e-30 | 1 |
extraskeletal myxoid chondrosarcoma | 9.99e-30 | 1 |