FFCP PHASE1:Hg19::chr2:56412902..56412919,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000432793,uc010fca.1_5end | |association_with_transcript=0bp_to_ENST00000432793,uc010fca.1_5end | ||
|cluster_id=chr2:56412902..56412919,- | |||
|coexpression_cluster_id=C140 | |coexpression_cluster_id=C140 | ||
|description=CAGE_peak_1_at_ENST00000432793_5end,CAGE_peak_1_at_uc010fca.1_5end | |description=CAGE_peak_1_at_ENST00000432793_5end,CAGE_peak_1_at_uc010fca.1_5end | ||
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|ontology_enrichment_celltype=CL:0002139!6.80e-23!24;CL:0000115!1.67e-18!35;CL:0000071!9.61e-18!18;CL:0002546!9.61e-18!18;CL:0002078!9.99e-14!44;CL:0000222!2.37e-13!119;CL:0000213!2.41e-13!57;CL:0000215!2.41e-13!57;CL:1000413!6.81e-10!9;CL:0002544!3.52e-07!6;CL:0002543!5.41e-07!6 | |ontology_enrichment_celltype=CL:0002139!6.80e-23!24;CL:0000115!1.67e-18!35;CL:0000071!9.61e-18!18;CL:0002546!9.61e-18!18;CL:0002078!9.99e-14!44;CL:0000222!2.37e-13!119;CL:0000213!2.41e-13!57;CL:0000215!2.41e-13!57;CL:1000413!6.81e-10!9;CL:0002544!3.52e-07!6;CL:0002543!5.41e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;7.41e-44;24!CL:0000115;4.48e-34;36!CL:0000071;1.11e-33;18!CL:0002078;2.23e-20;45!CL:1000413;4.70e-18;9!CL:0000213;5.74e-15;58!CL:0000215;5.74e-15;58!CL:0002544;1.08e-12;6!CL:0002543;2.62e-12;6!CL:0002138;1.17e-11;6!CL:0002618;6.02e-07;3!CL:0002188;6.85e-07;5 | |ontology_enrichment_celltype_v019=CL:0002139;7.41e-44;24!CL:0000115;4.48e-34;36!CL:0000071;1.11e-33;18!CL:0002078;2.23e-20;45!CL:1000413;4.70e-18;9!CL:0000213;5.74e-15;58!CL:0000215;5.74e-15;58!CL:0002544;1.08e-12;6!CL:0002543;2.62e-12;6!CL:0002138;1.17e-11;6!CL:0002618;6.02e-07;3!CL:0002188;6.85e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.85e-44,24;CL:0000115,1.43e-40,36;CL:0000071,1.25e-33,18;CL:0002546,1.25e-33,18;CL:0002078,1.96e-30,45;CL:0000213,1.40e-24,58;CL:0000215,1.40e-24,58;CL:1000413,4.84e-18,9;CL:0000222,8.62e-14,121;CL:0002544,1.10e-12,6;CL:0002543,2.56e-12,6;CL:0005020,9.67e-12,6;CL:0002138,9.67e-12,6;CL:0005022,9.67e-12,6;CL:0000076,2.79e-07,63;CL:0002618,5.81e-07,3;CL:0002188,6.78e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;1.11e-33;18!CL:0005022;1.17e-11;6 | |ontology_enrichment_development_v019=CL:0002546;1.11e-33;18!CL:0005022;1.17e-11;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.49e-27!115;UBERON:0000055!4.83e-25!69;UBERON:0000025!1.04e-24!194;UBERON:0004111!3.50e-24!241;UBERON:0004872!3.22e-23!84;UBERON:0001981!1.83e-22!60;UBERON:0007500!1.83e-22!60;UBERON:0004537!1.83e-22!60;UBERON:0006965!1.83e-22!60;UBERON:0002049!1.49e-20!79;UBERON:0007798!1.49e-20!79;UBERON:0000477!1.44e-19!286;UBERON:0001986!9.61e-18!18;UBERON:0004638!9.61e-18!18;UBERON:0004852!9.61e-18!18;UBERON:0001009!1.52e-17!113;UBERON:0004535!7.33e-16!110;UBERON:0000483!1.50e-14!309;UBERON:0000119!5.15e-14!312;UBERON:0003914!5.39e-14!118;UBERON:0000468!7.79e-14!659;UBERON:0001637!2.18e-13!42;UBERON:0003509!2.18e-13!42;UBERON:0004572!2.18e-13!42;UBERON:0000487!5.69e-13!22;UBERON:0001049!1.68e-11!57;UBERON:0005068!1.68e-11!57;UBERON:0006241!1.68e-11!57;UBERON:0007135!1.68e-11!57;UBERON:0000467!8.46e-11!625;UBERON:0003080!1.09e-10!42;UBERON:0000480!1.12e-10!626;UBERON:0006914!1.85e-10!25;UBERON:0002780!4.39e-10!41;UBERON:0001890!4.39e-10!41;UBERON:0006240!4.39e-10!41;UBERON:0000475!6.67e-10!365;UBERON:0003915!6.81e-10!9;UBERON:0004700!6.81e-10!9;UBERON:0001917!6.81e-10!9;UBERON:0002616!9.57e-10!59;UBERON:0004573!2.86e-09!33;UBERON:0004571!2.86e-09!33;UBERON:0003075!4.81e-09!86;UBERON:0007284!4.81e-09!86;UBERON:0002020!6.62e-09!34;UBERON:0003528!6.62e-09!34;UBERON:0001893!9.35e-09!34;UBERON:0000947!9.45e-09!21;UBERON:0010191!9.45e-09!21;UBERON:0002791!1.83e-08!33;UBERON:0000955!2.16e-08!69;UBERON:0006238!2.16e-08!69;UBERON:0005743!3.67e-08!86;UBERON:0002346!5.18e-08!90;UBERON:0001869!5.95e-08!32;UBERON:0001017!1.19e-07!82;UBERON:0001638!3.94e-07!9;UBERON:0003920!3.94e-07!9;UBERON:0004582!3.94e-07!9;UBERON:0000073!6.02e-07!94;UBERON:0001016!6.02e-07!94;UBERON:0000490!7.76e-07!138;UBERON:0002619!9.17e-07!22;UBERON:0003056!9.91e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!6.49e-27!115;UBERON:0000055!4.83e-25!69;UBERON:0000025!1.04e-24!194;UBERON:0004111!3.50e-24!241;UBERON:0004872!3.22e-23!84;UBERON:0001981!1.83e-22!60;UBERON:0007500!1.83e-22!60;UBERON:0004537!1.83e-22!60;UBERON:0006965!1.83e-22!60;UBERON:0002049!1.49e-20!79;UBERON:0007798!1.49e-20!79;UBERON:0000477!1.44e-19!286;UBERON:0001986!9.61e-18!18;UBERON:0004638!9.61e-18!18;UBERON:0004852!9.61e-18!18;UBERON:0001009!1.52e-17!113;UBERON:0004535!7.33e-16!110;UBERON:0000483!1.50e-14!309;UBERON:0000119!5.15e-14!312;UBERON:0003914!5.39e-14!118;UBERON:0000468!7.79e-14!659;UBERON:0001637!2.18e-13!42;UBERON:0003509!2.18e-13!42;UBERON:0004572!2.18e-13!42;UBERON:0000487!5.69e-13!22;UBERON:0001049!1.68e-11!57;UBERON:0005068!1.68e-11!57;UBERON:0006241!1.68e-11!57;UBERON:0007135!1.68e-11!57;UBERON:0000467!8.46e-11!625;UBERON:0003080!1.09e-10!42;UBERON:0000480!1.12e-10!626;UBERON:0006914!1.85e-10!25;UBERON:0002780!4.39e-10!41;UBERON:0001890!4.39e-10!41;UBERON:0006240!4.39e-10!41;UBERON:0000475!6.67e-10!365;UBERON:0003915!6.81e-10!9;UBERON:0004700!6.81e-10!9;UBERON:0001917!6.81e-10!9;UBERON:0002616!9.57e-10!59;UBERON:0004573!2.86e-09!33;UBERON:0004571!2.86e-09!33;UBERON:0003075!4.81e-09!86;UBERON:0007284!4.81e-09!86;UBERON:0002020!6.62e-09!34;UBERON:0003528!6.62e-09!34;UBERON:0001893!9.35e-09!34;UBERON:0000947!9.45e-09!21;UBERON:0010191!9.45e-09!21;UBERON:0002791!1.83e-08!33;UBERON:0000955!2.16e-08!69;UBERON:0006238!2.16e-08!69;UBERON:0005743!3.67e-08!86;UBERON:0002346!5.18e-08!90;UBERON:0001869!5.95e-08!32;UBERON:0001017!1.19e-07!82;UBERON:0001638!3.94e-07!9;UBERON:0003920!3.94e-07!9;UBERON:0004582!3.94e-07!9;UBERON:0000073!6.02e-07!94;UBERON:0001016!6.02e-07!94;UBERON:0000490!7.76e-07!138;UBERON:0002619!9.17e-07!22;UBERON:0003056!9.91e-07!61 | ||
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| ||
|short_description=p1@ENST00000432793,p1@uc010fca.1 | |short_description=p1@ENST00000432793,p1@uc010fca.1 | ||
}} | }} |
Latest revision as of 11:03, 29 July 2015
Short description: | p1@ENST00000432793, p1@uc010fca.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000432793_5end, CAGE_peak_1_at_uc010fca.1_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 0bp_to_ENST00000432793, uc010fca.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.85e-44 | 24 |
endothelial cell | 1.43e-40 | 36 |
blood vessel endothelial cell | 1.25e-33 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.25e-33 | 18 |
meso-epithelial cell | 1.96e-30 | 45 |
lining cell | 1.40e-24 | 58 |
barrier cell | 1.40e-24 | 58 |
endothelial cell of artery | 4.84e-18 | 9 |
mesodermal cell | 8.62e-14 | 121 |
aortic endothelial cell | 1.10e-12 | 6 |
vein endothelial cell | 2.56e-12 | 6 |
lymphangioblast | 9.67e-12 | 6 |
endothelial cell of lymphatic vessel | 9.67e-12 | 6 |
vascular lymphangioblast | 9.67e-12 | 6 |
squamous epithelial cell | 2.79e-07 | 63 |
endothelial cell of umbilical vein | 5.81e-07 | 3 |
glomerular endothelial cell | 6.78e-07 | 5 |