FFCP PHASE1:Hg19::chr11:14521349..14521365,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1315 | |EntrezGene=1315 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2231 | |HGNC=2231 | ||
|TSSclassifier=strong | |||
|UniProt=E9PP73 | |UniProt=E9PP73 | ||
|association_with_transcript=0bp_to_ENST00000533533,ENST00000534234_5end | |association_with_transcript=0bp_to_ENST00000533533,ENST00000534234_5end | ||
|cluster_id=chr11:14521349..14521365,- | |||
|description=CAGE_peak_2_at_COPB1_5end | |description=CAGE_peak_2_at_COPB1_5end | ||
|id=chr11:14521349..14521365,- | |id=chr11:14521349..14521365,- | ||
|ontology_enrichment_celltype=CL:0000548!1.24e-18!679;CL:0000004!1.24e-18!679;CL:0000255!1.24e-18!679;CL:0000012!5.73e-18!682;CL:0000055!3.11e-15!180;CL:0000144!2.44e-12!625;CL:0000057!4.56e-11!75;CL:0002371!5.49e-11!591;CL:0000048!5.05e-10!430;CL:0000003!5.50e-10!722;CL:0000723!2.82e-09!436;CL:0000063!3.81e-09!578;CL:0000034!8.78e-08!444;CL:0002620!8.91e-08!23;CL:0000680!1.91e-07!57;CL:0000056!1.91e-07!57;CL:0000355!1.91e-07!57;CL:0000359!2.87e-07!32;CL:0000222!8.38e-07!119 | |ontology_enrichment_celltype=CL:0000548!1.24e-18!679;CL:0000004!1.24e-18!679;CL:0000255!1.24e-18!679;CL:0000012!5.73e-18!682;CL:0000055!3.11e-15!180;CL:0000144!2.44e-12!625;CL:0000057!4.56e-11!75;CL:0002371!5.49e-11!591;CL:0000048!5.05e-10!430;CL:0000003!5.50e-10!722;CL:0000723!2.82e-09!436;CL:0000063!3.81e-09!578;CL:0000034!8.78e-08!444;CL:0002620!8.91e-08!23;CL:0000680!1.91e-07!57;CL:0000056!1.91e-07!57;CL:0000355!1.91e-07!57;CL:0000359!2.87e-07!32;CL:0000222!8.38e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002620;9.35e-08;23!CL:0000359;7.15e-07;32 | |ontology_enrichment_celltype_v019=CL:0002620;9.35e-08;23!CL:0000359;7.15e-07;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.61e-11,76;CL:0000048,6.86e-10,427;CL:0000723,3.80e-09,433;CL:0002620,8.91e-08,23;CL:0000034,1.15e-07,441;CL:0000359,2.87e-07,32;CL:0000680,4.19e-07,58;CL:0000056,4.19e-07,58;CL:0000355,4.19e-07,58 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:14566!5.55e-07!239 | |ontology_enrichment_disease=DOID:14566!5.55e-07!239 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:14566,5.55e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000914!5.27e-10!83;UBERON:0002329!5.27e-10!83;UBERON:0003077!5.27e-10!83;UBERON:0003059!5.27e-10!83;UBERON:0007282!5.27e-10!83;UBERON:0009618!5.27e-10!83;UBERON:0007285!5.27e-10!83;UBERON:0004290!1.06e-07!70;UBERON:0000486!1.97e-07!82;UBERON:0001637!3.72e-07!42;UBERON:0003509!3.72e-07!42;UBERON:0004572!3.72e-07!42;UBERON:0001134!5.28e-07!61;UBERON:0002036!5.28e-07!61;UBERON:0003082!5.28e-07!61;UBERON:0000490!7.05e-07!138 | |ontology_enrichment_uberon=UBERON:0000914!5.27e-10!83;UBERON:0002329!5.27e-10!83;UBERON:0003077!5.27e-10!83;UBERON:0003059!5.27e-10!83;UBERON:0007282!5.27e-10!83;UBERON:0009618!5.27e-10!83;UBERON:0007285!5.27e-10!83;UBERON:0004290!1.06e-07!70;UBERON:0000486!1.97e-07!82;UBERON:0001637!3.72e-07!42;UBERON:0003509!3.72e-07!42;UBERON:0004572!3.72e-07!42;UBERON:0001134!5.28e-07!61;UBERON:0002036!5.28e-07!61;UBERON:0003082!5.28e-07!61;UBERON:0000490!7.05e-07!138 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,2.15e-07,148;UBERON:0002329,2.16e-07,71;UBERON:0003059,2.16e-07,71;UBERON:0007282,2.16e-07,71;UBERON:0004290,2.16e-07,71;UBERON:0009618,2.16e-07,71;UBERON:0007524,3.06e-07,73;UBERON:0000486,3.69e-07,83;UBERON:0001637,3.72e-07,42;UBERON:0003509,3.72e-07,42;UBERON:0004572,3.72e-07,42;UBERON:0003077,6.54e-07,72;UBERON:0007285,6.54e-07,72 | |||
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| ||
|short_description=p2@COPB1 | |short_description=p2@COPB1 | ||
}} | }} |
Latest revision as of 21:36, 16 September 2015
Short description: | p2@COPB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_COPB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000533533, ENST00000534234_5end |
EntrezGene: | COPB1 |
HGNC: | 2231 |
UniProt: | E9PP73 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.61e-11 | 76 |
multi fate stem cell | 6.86e-10 | 427 |
somatic stem cell | 3.80e-09 | 433 |
skin fibroblast | 8.91e-08 | 23 |
stem cell | 1.15e-07 | 441 |
vascular associated smooth muscle cell | 2.87e-07 | 32 |
muscle precursor cell | 4.19e-07 | 58 |
myoblast | 4.19e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.19e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 2.15e-07 | 148 |
somite | 2.16e-07 | 71 |
presomitic mesoderm | 2.16e-07 | 71 |
presumptive segmental plate | 2.16e-07 | 71 |
dermomyotome | 2.16e-07 | 71 |
trunk paraxial mesoderm | 2.16e-07 | 71 |
dense mesenchyme tissue | 3.06e-07 | 73 |
multilaminar epithelium | 3.69e-07 | 83 |
artery | 3.72e-07 | 42 |
arterial blood vessel | 3.72e-07 | 42 |
arterial system | 3.72e-07 | 42 |
paraxial mesoderm | 6.54e-07 | 72 |
presumptive paraxial mesoderm | 6.54e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 5.55e-07 | 239 |