FFCP PHASE1:Hg19::chr10:77035971..77035990,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:77035971..77035990,+ | |||
|description=CAGE_peak_at_chr10:77035971..77035990,+ | |description=CAGE_peak_at_chr10:77035971..77035990,+ | ||
|id=chr10:77035971..77035990,+ | |id=chr10:77035971..77035990,+ | ||
|ontology_enrichment_celltype=CL:0000575!4.25e-07!2;CL:1000415!7.92e-07!2 | |ontology_enrichment_celltype=CL:0000575!4.25e-07!2;CL:1000415!7.92e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:1000415;6.80e-08;2 | |ontology_enrichment_celltype_v019=CL:1000415;6.80e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:1000415,5.02e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0009143;6.21e-15;1 | |ontology_enrichment_development_v019=UBERON:0009143;6.21e-15;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;4.53e-08;2 | |ontology_enrichment_disease_v019=DOID:3493;4.53e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,4.38e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.62e-11!169;UBERON:0000925!2.62e-11!169;UBERON:0006595!2.62e-11!169;UBERON:0002110!1.14e-09!3;UBERON:0006242!1.14e-09!3;UBERON:0007023!4.56e-09!115;UBERON:0000077!1.15e-08!130;UBERON:0001007!1.91e-08!155;UBERON:0001555!1.91e-08!155;UBERON:0007026!1.91e-08!155;UBERON:0000065!8.04e-08!53;UBERON:0004921!8.61e-08!129;UBERON:0004185!8.61e-08!129;UBERON:0000341!3.34e-07!2;UBERON:0003127!3.55e-07!2;UBERON:0002294!4.33e-07!7;UBERON:0001173!4.33e-07!7;UBERON:0004912!4.33e-07!7;UBERON:0003126!4.40e-07!7;UBERON:0001005!4.40e-07!7 | |ontology_enrichment_uberon=UBERON:0004119!2.62e-11!169;UBERON:0000925!2.62e-11!169;UBERON:0006595!2.62e-11!169;UBERON:0002110!1.14e-09!3;UBERON:0006242!1.14e-09!3;UBERON:0007023!4.56e-09!115;UBERON:0000077!1.15e-08!130;UBERON:0001007!1.91e-08!155;UBERON:0001555!1.91e-08!155;UBERON:0007026!1.91e-08!155;UBERON:0000065!8.04e-08!53;UBERON:0004921!8.61e-08!129;UBERON:0004185!8.61e-08!129;UBERON:0000341!3.34e-07!2;UBERON:0003127!3.55e-07!2;UBERON:0002294!4.33e-07!7;UBERON:0001173!4.33e-07!7;UBERON:0004912!4.33e-07!7;UBERON:0003126!4.40e-07!7;UBERON:0001005!4.40e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;1.72e-14;1!UBERON:0001961;1.72e-14;1!UBERON:0001744;1.72e-14;1!UBERON:0001042;1.72e-14;1!UBERON:0001735;1.72e-14;1!UBERON:0000945;9.25e-12;5!UBERON:0010039;9.25e-12;5!UBERON:0001041;2.75e-09;14!UBERON:0005178;5.93e-09;34!UBERON:0002224;5.93e-09;34!UBERON:0003126;1.85e-08;7!UBERON:0001005;1.85e-08;7!UBERON:0005181;6.32e-08;35!UBERON:0003127;6.80e-08;2!UBERON:0006562;6.80e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0002372;1.72e-14;1!UBERON:0001961;1.72e-14;1!UBERON:0001744;1.72e-14;1!UBERON:0001042;1.72e-14;1!UBERON:0001735;1.72e-14;1!UBERON:0000945;9.25e-12;5!UBERON:0010039;9.25e-12;5!UBERON:0001041;2.75e-09;14!UBERON:0005178;5.93e-09;34!UBERON:0002224;5.93e-09;34!UBERON:0003126;1.85e-08;7!UBERON:0001005;1.85e-08;7!UBERON:0005181;6.32e-08;35!UBERON:0003127;6.80e-08;2!UBERON:0006562;6.80e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,2.11e-14,1;UBERON:0001961,2.11e-14,1;UBERON:0001744,2.11e-14,1;UBERON:0001735,2.11e-14,1;UBERON:0005178,9.58e-10,34;UBERON:0002224,9.58e-10,34;UBERON:0005181,1.83e-09,35;UBERON:0001041,5.14e-09,87;UBERON:0004119,1.03e-08,160;UBERON:0000925,1.03e-08,160;UBERON:0006595,1.03e-08,160;UBERON:0003126,2.07e-08,7;UBERON:0001005,2.07e-08,7;UBERON:0004921,4.44e-08,118;UBERON:0001007,5.75e-08,145;UBERON:0001555,5.75e-08,145;UBERON:0007026,5.75e-08,145;UBERON:0003127,6.15e-08,2;UBERON:0000945,1.11e-07,8;UBERON:0010039,1.11e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,1.1240175325762,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.384380134730212,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.192444225451024,0,1.08890984861323,0.0941438007767792,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30423242938906,0,0,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.539210106883961,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58859361007152,0,1.12990370390266,0,0,0.0633107959558787,1.75996244461323,0.0801588202515337,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.22889013390003,1.17466153824464,0.157204305099666,0,0,0,0,0,0,0,0.612691153526923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,1.65471377237555,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45375584038107,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.437119121007915,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,2.19100916473955,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.852935927603924,0.476128862927481,0.452122368852043,0.496597714366863,0,0.381882949668989,0,0.217716747896961,0,1.14498490124799,1.29099969706817,0.332660356546013,0.162806537221949,0,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,1.1240175325762,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.384380134730212,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.192444225451024,0,1.08890984861323,0.0941438007767792,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30423242938906,0,0,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.539210106883961,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58859361007152,0,1.12990370390266,0,0,0.0633107959558787,1.75996244461323,0.0801588202515337,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.22889013390003,1.17466153824464,0.157204305099666,0,0,0,0,0,0,0,0.612691153526923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,1.65471377237555,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45375584038107,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.437119121007915,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,2.19100916473955,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.852935927603924,0.476128862927481,0.452122368852043,0.496597714366863,0,0.381882949668989,0,0.217716747896961,0,1.14498490124799,1.29099969706817,0.332660356546013,0.162806537221949,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p@chr10:77035971..77035990,+ | |short_description=p@chr10:77035971..77035990,+ | ||
}} | }} |
Latest revision as of 15:43, 23 July 2015
Short description: | p@chr10:77035971..77035990, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:77035971..77035990, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 5.02e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
tonsil | 2.11e-14 | 1 |
mucosa-associated lymphoid tissue | 2.11e-14 | 1 |
lymphoid tissue | 2.11e-14 | 1 |
tonsillar ring | 2.11e-14 | 1 |
thoracic cavity element | 9.58e-10 | 34 |
thoracic cavity | 9.58e-10 | 34 |
thoracic segment organ | 1.83e-09 | 35 |
foregut | 5.14e-09 | 87 |
endoderm-derived structure | 1.03e-08 | 160 |
endoderm | 1.03e-08 | 160 |
presumptive endoderm | 1.03e-08 | 160 |
trachea | 2.07e-08 | 7 |
respiratory airway | 2.07e-08 | 7 |
subdivision of digestive tract | 4.44e-08 | 118 |
digestive system | 5.75e-08 | 145 |
digestive tract | 5.75e-08 | 145 |
primitive gut | 5.75e-08 | 145 |
open tracheal system trachea | 6.15e-08 | 2 |
stomach | 1.11e-07 | 8 |
food storage organ | 1.11e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.38e-08 | 2 |