FFCP PHASE1:Hg19::chr22:30993827..30993833,+: Difference between revisions
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|id=chr22:30993827..30993833,+
|short_description=p1@ENST00000432130
|description=CAGE_peak_1_at_ENST00000432130_5end
|association_with_transcript=-462bp_to_ENST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-462bp_to_ENST00000432130_5end | |||
|cluster_id=chr22:30993827..30993833,+ | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_1_at_ENST00000432130_5end | |||
|id=chr22:30993827..30993833,+ | |||
|ontology_enrichment_celltype=CL:0002097!3.89e-11!2;CL:0000174!1.07e-07!3;CL:0000817!2.59e-07!3;CL:0002150!2.76e-07!3;CL:0000861!2.76e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002097;1.78e-09;2!CL:0000082;2.28e-08;19!CL:0000174;9.91e-07;3!CL:0000322;9.91e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,1.57e-09,2;CL:0000082,2.43e-08,19;CL:0000174,9.12e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.11e-07;10!UBERON:0005564;1.11e-07;10 | |||
|ontology_enrichment_disease=DOID:162!3.81e-11!235;DOID:14566!8.74e-11!239;DOID:0050687!3.35e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:6193;4.08e-18;1!DOID:3905;5.64e-17;9!DOID:3908;4.39e-14;5!DOID:1324;1.91e-10;15!DOID:1325;2.83e-10;7!DOID:3904;2.83e-10;7!DOID:0050615;7.89e-10;16!DOID:3350;9.87e-10;2!DOID:3910;1.78e-09;2!DOID:4556;8.38e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,3.75e-18,1;DOID:3905,6.47e-17,9;DOID:3908,5.01e-14,5;DOID:1324,2.07e-10,15;DOID:1325,3.11e-10,7;DOID:3904,3.11e-10,7;DOID:0050615,8.51e-10,16;DOID:3350,9.46e-10,2;DOID:3910,2.02e-09,2;DOID:4556,8.62e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002369!1.07e-07!3;UBERON:0001235!1.07e-07!3;UBERON:0006858!1.07e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.78e-09;2!UBERON:0002173;1.78e-09;2!UBERON:0002186;1.78e-09;2!UBERON:0000473;2.20e-09;8!UBERON:0004802;2.28e-08;19!UBERON:0000115;2.28e-08;19!UBERON:0002048;2.66e-07;22!UBERON:0004807;2.66e-07;22!UBERON:0000117;2.66e-07;22!UBERON:0000171;2.66e-07;22!UBERON:0000170;2.66e-07;22!UBERON:0003135;4.64e-07;11!UBERON:0002369;9.91e-07;3!UBERON:0004821;9.91e-07;3!UBERON:0001235;9.91e-07;3!UBERON:0007499;9.91e-07;3!UBERON:0003215;9.91e-07;3!UBERON:0006858;9.91e-07;3!UBERON:0010368;9.91e-07;3!UBERON:0009911;9.91e-07;3!UBERON:0002299;9.91e-07;3!UBERON:0006524;9.91e-07;3!UBERON:0008874;9.91e-07;3!UBERON:0002169;9.91e-07;3!UBERON:0004894;9.91e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.02e-09,2;UBERON:0002173,2.02e-09,2;UBERON:0002186,2.02e-09,2;UBERON:0000473,2.25e-09,8;UBERON:0004802,2.43e-08,19;UBERON:0000115,2.43e-08,19;UBERON:0002048,2.81e-07,22;UBERON:0000117,2.81e-07,22;UBERON:0000171,2.81e-07,22;UBERON:0000170,2.81e-07,22;UBERON:0005597,2.81e-07,22;UBERON:0000118,2.81e-07,22;UBERON:0003135,4.71e-07,11;UBERON:0002369,9.12e-07,3;UBERON:0001235,9.12e-07,3;UBERON:0006858,9.12e-07,3 | |||
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|short_description=p1@ENST00000432130 | |||
}} | }} |
Latest revision as of 20:11, 28 July 2015
Short description: | p1@ENST00000432130 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000432130_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | -462bp_to_ENST00000432130_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 1.57e-09 | 2 |
epithelial cell of lung | 2.43e-08 | 19 |
steroid hormone secreting cell | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.02e-09 | 2 |
alveolar duct | 2.02e-09 | 2 |
bronchiole | 2.02e-09 | 2 |
testis | 2.25e-09 | 8 |
respiratory tract epithelium | 2.43e-08 | 19 |
lung epithelium | 2.43e-08 | 19 |
lung | 2.81e-07 | 22 |
respiratory tube | 2.81e-07 | 22 |
respiration organ | 2.81e-07 | 22 |
pair of lungs | 2.81e-07 | 22 |
lung primordium | 2.81e-07 | 22 |
lung bud | 2.81e-07 | 22 |
male reproductive organ | 4.71e-07 | 11 |
adrenal gland | 9.12e-07 | 3 |
adrenal cortex | 9.12e-07 | 3 |
adrenal/interrenal gland | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 3.75e-18 | 1 |
lung carcinoma | 6.47e-17 | 9 |
non-small cell lung carcinoma | 5.01e-14 | 5 |
lung cancer | 2.07e-10 | 15 |
bronchus cancer | 3.11e-10 | 7 |
bronchogenic carcinoma | 3.11e-10 | 7 |
respiratory system cancer | 8.51e-10 | 16 |
mesenchymal cell neoplasm | 9.46e-10 | 2 |
lung adenocarcinoma | 2.02e-09 | 2 |
lung large cell carcinoma | 8.62e-07 | 3 |