FFCP PHASE1:Hg19::chr11:72281596..72281657,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-46bp_to_ENST00000450804,uc001osl.2_5end | |association_with_transcript=-46bp_to_ENST00000450804,uc001osl.2_5end | ||
|cluster_id=chr11:72281596..72281657,+ | |||
|description=CAGE_peak_1_at_ENST00000450804_5end,CAGE_peak_1_at_uc001osl.2_5end | |description=CAGE_peak_1_at_ENST00000450804_5end,CAGE_peak_1_at_uc001osl.2_5end | ||
|id=chr11:72281596..72281657,+ | |id=chr11:72281596..72281657,+ | ||
|ontology_enrichment_celltype=CL:0000860!4.79e-25!45;CL:0002057!2.09e-21!42;CL:0002194!2.28e-20!63;CL:0000576!2.28e-20!63;CL:0000040!2.28e-20!63;CL:0000559!2.28e-20!63;CL:0002009!2.30e-19!65;CL:0000839!4.07e-17!70;CL:0000557!1.04e-16!71;CL:0000766!9.54e-16!76;CL:0000763!3.16e-08!112;CL:0000049!3.16e-08!112;CL:0002087!3.34e-07!119 | |ontology_enrichment_celltype=CL:0000860!4.79e-25!45;CL:0002057!2.09e-21!42;CL:0002194!2.28e-20!63;CL:0000576!2.28e-20!63;CL:0000040!2.28e-20!63;CL:0000559!2.28e-20!63;CL:0002009!2.30e-19!65;CL:0000839!4.07e-17!70;CL:0000557!1.04e-16!71;CL:0000766!9.54e-16!76;CL:0000763!3.16e-08!112;CL:0000049!3.16e-08!112;CL:0002087!3.34e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.62e-49;33!CL:0002057;7.62e-49;33!CL:0000473;4.26e-36;39!CL:0000234;4.26e-36;39!CL:0000576;6.88e-22;48!CL:0000766;3.88e-14;69!CL:0002593;1.13e-07;2 | |ontology_enrichment_celltype_v019=CL:0000860;7.62e-49;33!CL:0002057;7.62e-49;33!CL:0000473;4.26e-36;39!CL:0000234;4.26e-36;39!CL:0000576;6.88e-22;48!CL:0000766;3.88e-14;69!CL:0002593;1.13e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.47e-39,42;CL:0002057,2.47e-39,42;CL:0000473,1.27e-36,48;CL:0000234,1.27e-36,48;CL:0002194,1.26e-30,59;CL:0000576,1.26e-30,59;CL:0000040,1.26e-30,59;CL:0000559,1.26e-30,59;CL:0002009,2.05e-29,61;CL:0000839,1.05e-26,66;CL:0000557,3.28e-26,67;CL:0000766,6.03e-24,72;CL:0000763,7.72e-14,108;CL:0000049,7.72e-14,108;CL:0002087,1.29e-12,115;CL:0002031,7.85e-12,120;CL:0000738,1.01e-09,136;CL:0002593,8.81e-08,2;CL:0002032,2.66e-07,161;CL:0000837,2.66e-07,161;CL:0000037,9.24e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;5.20e-31;42 | |ontology_enrichment_development_v019=CL:0002057;5.20e-31;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.51e-14!80;UBERON:0002390!3.83e-13!102;UBERON:0003061!3.83e-13!102;UBERON:0002193!5.59e-13!112;UBERON:0001474!1.02e-12!86;UBERON:0002405!1.55e-11!115;UBERON:0003081!5.60e-11!216;UBERON:0002204!3.24e-10!167;UBERON:0004765!6.91e-10!101;UBERON:0001434!6.91e-10!101;UBERON:0000926!1.83e-08!448;UBERON:0004120!1.83e-08!448;UBERON:0006603!1.83e-08!448 | |ontology_enrichment_uberon=UBERON:0002371!1.51e-14!80;UBERON:0002390!3.83e-13!102;UBERON:0003061!3.83e-13!102;UBERON:0002193!5.59e-13!112;UBERON:0001474!1.02e-12!86;UBERON:0002405!1.55e-11!115;UBERON:0003081!5.60e-11!216;UBERON:0002204!3.24e-10!167;UBERON:0004765!6.91e-10!101;UBERON:0001434!6.91e-10!101;UBERON:0000926!1.83e-08!448;UBERON:0004120!1.83e-08!448;UBERON:0006603!1.83e-08!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0002456;1.13e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0002456;1.13e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.92e-24,76;UBERON:0001474,5.35e-22,82;UBERON:0002405,2.80e-20,93;UBERON:0004765,1.89e-19,90;UBERON:0002390,2.55e-17,98;UBERON:0003061,2.55e-17,98;UBERON:0001434,7.68e-17,100;UBERON:0002193,1.67e-16,108;UBERON:0002204,4.67e-13,167;UBERON:0003081,8.73e-13,203;UBERON:0002456,8.81e-08,2;UBERON:0000926,6.01e-07,315;UBERON:0004120,6.01e-07,315;UBERON:0006603,6.01e-07,315 | |||
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| ||
|short_description=p1@ENST00000450804,p1@uc001osl.2 | |short_description=p1@ENST00000450804,p1@uc001osl.2 | ||
}} | }} |
Latest revision as of 02:12, 24 July 2015
Short description: | p1@ENST00000450804, p1@uc001osl.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000450804_5end, CAGE_peak_1_at_uc001osl.2_5end |
Coexpression cluster: | NA |
Association with transcript: | -46bp_to_ENST00000450804, uc001osl.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.47e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.47e-39 | 42 |
defensive cell | 1.27e-36 | 48 |
phagocyte | 1.27e-36 | 48 |
monopoietic cell | 1.26e-30 | 59 |
monocyte | 1.26e-30 | 59 |
monoblast | 1.26e-30 | 59 |
promonocyte | 1.26e-30 | 59 |
macrophage dendritic cell progenitor | 2.05e-29 | 61 |
myeloid lineage restricted progenitor cell | 1.05e-26 | 66 |
granulocyte monocyte progenitor cell | 3.28e-26 | 67 |
myeloid leukocyte | 6.03e-24 | 72 |
myeloid cell | 7.72e-14 | 108 |
common myeloid progenitor | 7.72e-14 | 108 |
nongranular leukocyte | 1.29e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 7.85e-12 | 120 |
leukocyte | 1.01e-09 | 136 |
smooth muscle cell of the internal thoracic artery | 8.81e-08 | 2 |
hematopoietic oligopotent progenitor cell | 2.66e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.66e-07 | 161 |
hematopoietic stem cell | 9.24e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.92e-24 | 76 |
bone element | 5.35e-22 | 82 |
immune system | 2.80e-20 | 93 |
skeletal element | 1.89e-19 | 90 |
hematopoietic system | 2.55e-17 | 98 |
blood island | 2.55e-17 | 98 |
skeletal system | 7.68e-17 | 100 |
hemolymphoid system | 1.67e-16 | 108 |
musculoskeletal system | 4.67e-13 | 167 |
lateral plate mesoderm | 8.73e-13 | 203 |
internal thoracic artery | 8.81e-08 | 2 |
mesoderm | 6.01e-07 | 315 |
mesoderm-derived structure | 6.01e-07 | 315 |
presumptive mesoderm | 6.01e-07 | 315 |