FFCP PHASE1:Hg19::chr22:31739395..31739404,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr22:31739395..31739404,-
|short_description=p24@PATZ1
|description=CAGE_peak_24_at_PATZ1_5end
|association_with_transcript=-124bp_to_ENST00000494109_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23598 | |EntrezGene=23598 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13071 | |HGNC=13071 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-124bp_to_ENST00000494109_5end | |||
|cluster_id=chr22:31739395..31739404,- | |||
|coexpression_cluster_id=C744 | |||
|description=CAGE_peak_24_at_PATZ1_5end | |||
|id=chr22:31739395..31739404,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002327;2.66e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,2.80e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;8.10e-41;1!UBERON:0005754;1.48e-40;1!UBERON:0006298;2.70e-40;1!UBERON:0007297;4.66e-21;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;2.66e-11;4!DOID:1612;2.66e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.80e-11,4;DOID:1612,2.80e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0006947!8.57e-18!3;UBERON:0004054!8.57e-18!3;UBERON:0003135!2.05e-17!11;UBERON:0007023!2.65e-14!115;UBERON:0005904!1.80e-13!4;UBERON:0001829!3.37e-12!2;UBERON:0003127!3.76e-12!2;UBERON:0003101!2.69e-11!22;UBERON:0000079!2.69e-11!22;UBERON:0000464!1.17e-09!104;UBERON:0001044!5.79e-09!6;UBERON:0003293!5.79e-09!6;UBERON:0003294!5.79e-09!6;UBERON:0010047!5.79e-09!6;UBERON:0000167!5.79e-09!6;UBERON:0000466!2.13e-07!126;UBERON:0000489!3.01e-07!32;UBERON:0002553!3.92e-07!70;UBERON:0001000!4.09e-07!1;UBERON:0005352!4.09e-07!1;UBERON:0000998!4.58e-07!1;UBERON:0006868!4.58e-07!1;UBERON:0006122!4.85e-07!1;UBERON:0001736!5.13e-07!1;UBERON:0006298!5.13e-07!1;UBERON:0001301!5.43e-07!1;UBERON:0001831!7.60e-07!1;UBERON:0001567!7.60e-07!1;UBERON:0008801!7.60e-07!1;UBERON:0000989!8.03e-07!1;UBERON:0008811!8.03e-07!1;UBERON:0006258!8.03e-07!1;UBERON:0005876!8.03e-07!1;UBERON:0004874!8.03e-07!1;UBERON:0007029!8.49e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.92e-53;3!UBERON:0004054;1.92e-53;3!UBERON:0001000;8.10e-41;1!UBERON:0005352;8.10e-41;1!UBERON:0000998;1.48e-40;1!UBERON:0006868;1.48e-40;1!UBERON:0005904;2.01e-40;4!UBERON:0001736;2.70e-40;1!UBERON:0001829;6.30e-21;2!UBERON:0000058;6.66e-17;10!UBERON:0000310;7.51e-17;10!UBERON:0003135;1.81e-15;11!UBERON:0001443;2.02e-15;11!UBERON:0001911;2.66e-11;4!UBERON:0004175;1.34e-08;21!UBERON:0003101;2.98e-08;22!UBERON:0000079;2.98e-08;22!UBERON:0001044;7.01e-08;6!UBERON:0003293;7.01e-08;6!UBERON:0003294;7.01e-08;6!UBERON:0010047;7.01e-08;6!UBERON:0003408;7.01e-08;6!UBERON:0000167;7.01e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.68e-53,3;UBERON:0004054,1.68e-53,3;UBERON:0001000,6.62e-41,1;UBERON:0005352,6.62e-41,1;UBERON:0000998,1.48e-40,1;UBERON:0006868,1.48e-40,1;UBERON:0005904,1.81e-40,4;UBERON:0001736,3.30e-40,1;UBERON:0006298,3.30e-40,1;UBERON:0001829,6.96e-21,2;UBERON:0000310,7.51e-17,10;UBERON:0003135,1.74e-15,11;UBERON:0001443,2.02e-15,11;UBERON:0001911,2.80e-11,4;UBERON:0005333,2.80e-11,4;UBERON:0008425,2.80e-11,4;UBERON:0005311,2.80e-11,4;UBERON:0000058,2.08e-09,19;UBERON:0003101,2.93e-08,22;UBERON:0000079,2.93e-08,22;UBERON:0001044,7.25e-08,6;UBERON:0003293,7.25e-08,6;UBERON:0003294,7.25e-08,6;UBERON:0010047,7.25e-08,6;UBERON:0000167,7.25e-08,6;UBERON:0004175,2.20e-07,25;UBERON:0002530,8.00e-07,59 | |||
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|short_description=p24@PATZ1 | |||
}} | }} |
Latest revision as of 20:29, 19 September 2015
Short description: | p24@PATZ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_PATZ1_5end |
Coexpression cluster: | C744_breast_salivary_parotid_submaxillary_seminal_small_ductus |
Association with transcript: | -124bp_to_ENST00000494109_5end |
EntrezGene: | PATZ1 |
HGNC: | 13071 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 2.80e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.68e-53 | 3 |
internal male genitalia | 1.68e-53 | 3 |
vas deferens | 6.62e-41 | 1 |
spermatic cord | 6.62e-41 | 1 |
seminal vesicle | 1.48e-40 | 1 |
seminal fluid secreting gland | 1.48e-40 | 1 |
duct of male reproductive system | 1.81e-40 | 4 |
submandibular gland | 3.30e-40 | 1 |
submandibular gland primordium | 3.30e-40 | 1 |
major salivary gland | 6.96e-21 | 2 |
breast | 7.51e-17 | 10 |
male reproductive organ | 1.74e-15 | 11 |
chest | 2.02e-15 | 11 |
mammary gland | 2.80e-11 | 4 |
mammary bud | 2.80e-11 | 4 |
mammary ridge | 2.80e-11 | 4 |
mammary placode | 2.80e-11 | 4 |
duct | 2.08e-09 | 19 |
male organism | 2.93e-08 | 22 |
male reproductive system | 2.93e-08 | 22 |
saliva-secreting gland | 7.25e-08 | 6 |
gland of oral region | 7.25e-08 | 6 |
gland of foregut | 7.25e-08 | 6 |
oral gland | 7.25e-08 | 6 |
oral cavity | 7.25e-08 | 6 |
internal genitalia | 2.20e-07 | 25 |
gland | 8.00e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.80e-11 | 4 |
breast cancer | 2.80e-11 | 4 |