FFCP PHASE1:Hg19::chr22:32439240..32439257,+: Difference between revisions
From FANTOM5_SSTAR
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|id=chr22:32439240..32439257,+
|short_description=p1@SLC5A1
|description=CAGE_peak_1_at_SLC5A1_5end
|association_with_transcript=203bp_to_uc003amc.2_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6523 | |EntrezGene=6523 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11036 | |HGNC=11036 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=203bp_to_uc003amc.2_5end | |||
|cluster_id=chr22:32439240..32439257,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_SLC5A1_5end | |||
|id=chr22:32439240..32439257,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.59e-10;1!UBERON:0005754;4.64e-10;1!UBERON:0001045;5.79e-10;1!UBERON:0003104;1.41e-09;31!UBERON:0003918;3.13e-08;10!UBERON:0007687;3.13e-08;10!UBERON:0004161;1.22e-07;11 | |||
|ontology_enrichment_disease=DOID:3493!2.33e-09!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.78e-17!115;UBERON:0006947!5.74e-13!3;UBERON:0004054!5.74e-13!3;UBERON:0005409!5.46e-12!35;UBERON:0005904!7.77e-10!4;UBERON:0003127!6.17e-09!2;UBERON:0003135!7.84e-09!11;UBERON:0000160!1.65e-08!27;UBERON:0002360!2.01e-08!2;UBERON:0000094!2.01e-08!2;UBERON:0007645!2.01e-08!2;UBERON:0004921!8.16e-08!129;UBERON:0004185!8.16e-08!129;UBERON:0001155!8.25e-08!9;UBERON:0001007!2.11e-07!155;UBERON:0001555!2.11e-07!155;UBERON:0007026!2.11e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;7.89e-30;22!UBERON:0000160;1.60e-23;17!UBERON:0004921;2.87e-17;33!UBERON:0002108;6.22e-17;4!UBERON:0001155;6.37e-16;9!UBERON:0000059;4.56e-13;11!UBERON:0006947;2.18e-12;3!UBERON:0004054;2.18e-12;3!UBERON:0000998;4.64e-10;1!UBERON:0006868;4.64e-10;1!UBERON:0001154;5.79e-10;1!UBERON:0001153;5.79e-10;1!UBERON:0009854;5.79e-10;1!UBERON:0001000;8.99e-10;1!UBERON:0005352;8.99e-10;1!UBERON:0005904;1.62e-09;4!UBERON:0001555;2.15e-08;54!UBERON:0000945;7.38e-08;5!UBERON:0010039;7.38e-08;5!UBERON:0001007;2.91e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.83e-26,25;UBERON:0000160,1.52e-23,17;UBERON:0002108,6.22e-17,4;UBERON:0001155,6.01e-16,9;UBERON:0000059,4.36e-13,11;UBERON:0006947,2.12e-12,3;UBERON:0004054,2.12e-12,3;UBERON:0004921,3.62e-10,118;UBERON:0000998,4.85e-10,1;UBERON:0006868,4.85e-10,1;UBERON:0001154,5.30e-10,1;UBERON:0001153,5.30e-10,1;UBERON:0001045,5.30e-10,1;UBERON:0001000,8.24e-10,1;UBERON:0005352,8.24e-10,1;UBERON:0005904,1.59e-09,4;UBERON:0001007,2.59e-09,145;UBERON:0001555,2.59e-09,145;UBERON:0007026,2.59e-09,145;UBERON:0004119,3.20e-08,160;UBERON:0000925,3.20e-08,160;UBERON:0006595,3.20e-08,160;UBERON:0005172,4.90e-07,54;UBERON:0005173,4.90e-07,54 | |||
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| ||
|short_description=p1@SLC5A1 | |||
}} | }} |
Latest revision as of 21:41, 19 September 2015
Short description: | p1@SLC5A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC5A1_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 203bp_to_uc003amc.2_5end |
EntrezGene: | SLC5A1 |
HGNC: | 11036 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.83e-26 | 25 |
intestine | 1.52e-23 | 17 |
small intestine | 6.22e-17 | 4 |
colon | 6.01e-16 | 9 |
large intestine | 4.36e-13 | 11 |
male genital duct | 2.12e-12 | 3 |
internal male genitalia | 2.12e-12 | 3 |
subdivision of digestive tract | 3.62e-10 | 118 |
seminal vesicle | 4.85e-10 | 1 |
seminal fluid secreting gland | 4.85e-10 | 1 |
vermiform appendix | 5.30e-10 | 1 |
caecum | 5.30e-10 | 1 |
midgut | 5.30e-10 | 1 |
vas deferens | 8.24e-10 | 1 |
spermatic cord | 8.24e-10 | 1 |
duct of male reproductive system | 1.59e-09 | 4 |
digestive system | 2.59e-09 | 145 |
digestive tract | 2.59e-09 | 145 |
primitive gut | 2.59e-09 | 145 |
endoderm-derived structure | 3.20e-08 | 160 |
endoderm | 3.20e-08 | 160 |
presumptive endoderm | 3.20e-08 | 160 |
abdomen element | 4.90e-07 | 54 |
abdominal segment element | 4.90e-07 | 54 |