FFCP PHASE1:Hg19::chr22:35921483..35921490,-: Difference between revisions
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|id=chr22:35921483..35921490,-
|short_description=p@chr22:35921483..35921490,-
|description=CAGE_peak_at_chr22:35921483..35921490,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr22:35921483..35921490,- | |||
|coexpression_cluster_id=C171 | |||
|description=CAGE_peak_at_chr22:35921483..35921490,- | |||
|id=chr22:35921483..35921490,- | |||
|ontology_enrichment_celltype=CL:0000242!6.38e-24!2;CL:0000312!3.80e-10!5;CL:0000240!1.34e-08!6;CL:0000311!1.34e-08!6;CL:0000079!1.34e-08!6;CL:0000237!1.34e-08!6;CL:0000036!1.34e-08!6;CL:0000357!1.34e-08!6;CL:0000114!1.34e-08!6;CL:0002535!6.42e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;6.43e-131;2!CL:0000242;6.43e-131;2!CL:0000312;2.51e-53;5!CL:0000240;1.09e-44;6!CL:0000311;1.09e-44;6!CL:0000079;1.09e-44;6!CL:0000237;1.09e-44;6!CL:0000362;2.87e-30;9!CL:0002159;6.18e-20;14!CL:0000095;5.09e-15;17!CL:0002319;6.40e-11;25!CL:0002077;1.22e-08;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.61e-131,2;CL:0000312,2.19e-53,5;CL:0000240,9.76e-45,6;CL:0000311,9.76e-45,6;CL:0000079,9.76e-45,6;CL:0000237,9.76e-45,6;CL:0000036,9.76e-45,6;CL:0000357,9.76e-45,6;CL:0000114,9.76e-45,6;CL:0000362,2.66e-30,9;CL:0002159,5.89e-20,14;CL:0000095,4.91e-15,17;CL:0000123,4.91e-15,17;CL:0002319,6.25e-11,25;CL:0002077,6.54e-09,34;CL:0000333,2.86e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000357;1.09e-44;6!CL:0000114;1.09e-44;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005418!8.85e-13!1;UBERON:0001389!8.85e-13!1;UBERON:0000026!8.85e-13!1;UBERON:0008784!8.85e-13!1;UBERON:0006058!8.85e-13!1;UBERON:0003663!8.85e-13!1;UBERON:0001383!8.85e-13!1;UBERON:0004256!8.85e-13!1;UBERON:0002529!8.85e-13!1;UBERON:0004708!8.85e-13!1;UBERON:0002101!8.85e-13!1;UBERON:0004709!8.85e-13!1;UBERON:0003661!8.85e-13!1;UBERON:0002471!8.85e-13!1;UBERON:0004357!8.85e-13!1;UBERON:0009872!8.85e-13!1;UBERON:0004347!8.85e-13!1;UBERON:0005420!8.85e-13!1;UBERON:0005732!8.85e-13!1;UBERON:0006057!8.85e-13!1;UBERON:0000978!8.85e-13!1;UBERON:0002103!8.85e-13!1;UBERON:0001665!8.85e-13!1;UBERON:0003823!8.85e-13!1;UBERON:0000154!8.85e-13!1;UBERON:0005733!8.85e-13!1;UBERON:0005730!8.85e-13!1;UBERON:0003112!1.25e-12!1;UBERON:0000032!1.25e-12!1;UBERON:0005253!1.25e-12!1;UBERON:0003128!1.25e-12!1;UBERON:0002241!1.25e-12!1;UBERON:0001703!1.25e-12!1;UBERON:0004761!1.25e-12!1;UBERON:0009617!1.25e-12!1;UBERON:0002022!1.75e-12!1;UBERON:0007190!3.85e-12!1;UBERON:0002372!4.31e-12!1;UBERON:0001961!4.31e-12!1;UBERON:0001744!4.31e-12!1;UBERON:0001735!4.31e-12!1;UBERON:0002780!4.40e-09!41;UBERON:0001890!4.40e-09!41;UBERON:0006240!4.40e-09!41;UBERON:0003080!7.32e-09!42;UBERON:0000153!1.27e-08!129;UBERON:0007811!1.27e-08!129;UBERON:0003056!4.54e-08!61;UBERON:0001894!2.86e-07!7;UBERON:0006222!2.86e-07!7;UBERON:0001630!5.11e-07!2;UBERON:0005090!5.11e-07!2;UBERON:0000007!5.41e-07!2;UBERON:0000955!5.83e-07!69;UBERON:0006238!5.83e-07!69;UBERON:0006955!6.42e-07!2;UBERON:0004801!6.42e-07!2;UBERON:0000341!6.80e-07!2;UBERON:0001875!8.52e-07!2;UBERON:0006514!8.52e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;3.34e-66;1!UBERON:0000026;3.34e-66;1!UBERON:0008784;3.34e-66;1!UBERON:0006058;3.34e-66;1!UBERON:0003663;3.34e-66;1!UBERON:0004256;3.34e-66;1!UBERON:0004708;3.34e-66;1!UBERON:0002101;3.34e-66;1!UBERON:0004709;3.34e-66;1!UBERON:0002529;3.34e-66;1!UBERON:0010538;3.34e-66;1!UBERON:0003661;3.34e-66;1!UBERON:0010890;3.34e-66;1!UBERON:0002471;3.34e-66;1!UBERON:0001383;3.34e-66;1!UBERON:0010758;3.34e-66;1!UBERON:0010707;3.34e-66;1!UBERON:0000978;3.34e-66;1!UBERON:0002103;3.34e-66;1!UBERON:0001665;3.34e-66;1!UBERON:0003823;3.34e-66;1!UBERON:0000154;3.34e-66;1!UBERON:0010709;3.34e-66;1!UBERON:0005090;5.96e-34;2!UBERON:0001630;5.96e-34;2!UBERON:0001003;1.08e-18;15!UBERON:0007376;1.08e-18;15!UBERON:0010371;2.74e-09;31 | |||
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|short_description=p@chr22:35921483..35921490,- | |||
}} | }} |
Latest revision as of 20:36, 28 July 2015
Short description: | p@chr22:35921483..35921490, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:35921483..35921490, - |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.61e-131 | 2 |
keratinocyte | 2.19e-53 | 5 |
stratified squamous epithelial cell | 9.76e-45 | 6 |
keratin accumulating cell | 9.76e-45 | 6 |
stratified epithelial cell | 9.76e-45 | 6 |
keratinizing barrier epithelial cell | 9.76e-45 | 6 |
epithelial fate stem cell | 9.76e-45 | 6 |
stratified epithelial stem cell | 9.76e-45 | 6 |
surface ectodermal cell | 9.76e-45 | 6 |
epidermal cell | 2.66e-30 | 9 |
general ecto-epithelial cell | 5.89e-20 | 14 |
neuron associated cell | 4.91e-15 | 17 |
neuron associated cell (sensu Vertebrata) | 4.91e-15 | 17 |
neural cell | 6.25e-11 | 25 |
ecto-epithelial cell | 6.54e-09 | 34 |
migratory neural crest cell | 2.86e-07 | 41 |