FFCP PHASE1:Hg19::chr10:64470196..64470205,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:64470196..64470205,+ | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_at_chr10:64470196..64470205,+ | |description=CAGE_peak_at_chr10:64470196..64470205,+ | ||
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|ontology_enrichment_celltype=CL:0002057!2.52e-107!42;CL:0000860!6.85e-100!45;CL:0002194!2.91e-80!63;CL:0000576!2.91e-80!63;CL:0000040!2.91e-80!63;CL:0000559!2.91e-80!63;CL:0002009!1.06e-77!65;CL:0000839!6.37e-72!70;CL:0000557!7.30e-71!71;CL:0000766!5.60e-66!76;CL:0002087!6.42e-44!119;CL:0000763!1.50e-43!112;CL:0000049!1.50e-43!112;CL:0002031!5.54e-42!124;CL:0000738!1.05e-36!140;CL:0002032!1.71e-30!165;CL:0000837!1.71e-30!165;CL:0000037!4.49e-29!172;CL:0000566!4.49e-29!172;CL:0000988!3.11e-27!182;CL:0000134!1.49e-11!358;CL:0002320!3.08e-11!365;CL:0000219!3.97e-10!390;CL:0000048!8.53e-09!430;CL:0000723!1.32e-08!436;CL:0000034!2.32e-08!444 | |ontology_enrichment_celltype=CL:0002057!2.52e-107!42;CL:0000860!6.85e-100!45;CL:0002194!2.91e-80!63;CL:0000576!2.91e-80!63;CL:0000040!2.91e-80!63;CL:0000559!2.91e-80!63;CL:0002009!1.06e-77!65;CL:0000839!6.37e-72!70;CL:0000557!7.30e-71!71;CL:0000766!5.60e-66!76;CL:0002087!6.42e-44!119;CL:0000763!1.50e-43!112;CL:0000049!1.50e-43!112;CL:0002031!5.54e-42!124;CL:0000738!1.05e-36!140;CL:0002032!1.71e-30!165;CL:0000837!1.71e-30!165;CL:0000037!4.49e-29!172;CL:0000566!4.49e-29!172;CL:0000988!3.11e-27!182;CL:0000134!1.49e-11!358;CL:0002320!3.08e-11!365;CL:0000219!3.97e-10!390;CL:0000048!8.53e-09!430;CL:0000723!1.32e-08!436;CL:0000034!2.32e-08!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.37e-69;33!CL:0002057;1.37e-69;33!CL:0000473;1.03e-47;39!CL:0000234;1.03e-47;39!CL:0000576;5.39e-34;48!CL:0000766;9.13e-19;69!CL:0000763;1.34e-08;100 | |ontology_enrichment_celltype_v019=CL:0000860;1.37e-69;33!CL:0002057;1.37e-69;33!CL:0000473;1.03e-47;39!CL:0000234;1.03e-47;39!CL:0000576;5.39e-34;48!CL:0000766;9.13e-19;69!CL:0000763;1.34e-08;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.93e-60,42;CL:0002057,4.93e-60,42;CL:0000473,1.96e-52,48;CL:0000234,1.96e-52,48;CL:0002194,8.73e-42,59;CL:0000576,8.73e-42,59;CL:0000040,8.73e-42,59;CL:0000559,8.73e-42,59;CL:0002009,2.07e-40,61;CL:0000839,2.48e-37,66;CL:0000557,9.06e-37,67;CL:0000766,3.43e-34,72;CL:0000763,1.37e-22,108;CL:0000049,1.37e-22,108;CL:0002087,3.64e-21,115;CL:0002031,3.00e-20,120;CL:0000738,9.17e-18,136;CL:0002032,7.41e-15,161;CL:0000837,7.41e-15,161;CL:0000037,3.40e-14,168;CL:0000988,2.02e-13,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.48e-51;42!CL:0000049;1.55e-08;108 | |ontology_enrichment_development_v019=CL:0002057;4.48e-51;42!CL:0000049;1.55e-08;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.67e-62!80;UBERON:0001474!6.85e-58!86;UBERON:0004765!9.98e-49!101;UBERON:0001434!9.98e-49!101;UBERON:0002390!3.28e-48!102;UBERON:0003061!3.28e-48!102;UBERON:0002193!1.50e-43!112;UBERON:0002405!2.62e-42!115;UBERON:0002204!8.29e-28!167;UBERON:0003081!1.76e-20!216;UBERON:0002384!8.29e-11!375;UBERON:0000926!2.21e-07!448;UBERON:0004120!2.21e-07!448;UBERON:0006603!2.21e-07!448 | |ontology_enrichment_uberon=UBERON:0002371!1.67e-62!80;UBERON:0001474!6.85e-58!86;UBERON:0004765!9.98e-49!101;UBERON:0001434!9.98e-49!101;UBERON:0002390!3.28e-48!102;UBERON:0003061!3.28e-48!102;UBERON:0002193!1.50e-43!112;UBERON:0002405!2.62e-42!115;UBERON:0002204!8.29e-28!167;UBERON:0003081!1.76e-20!216;UBERON:0002384!8.29e-11!375;UBERON:0000926!2.21e-07!448;UBERON:0004120!2.21e-07!448;UBERON:0006603!2.21e-07!448 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.28e-32,76;UBERON:0001474,5.79e-30,82;UBERON:0004765,3.01e-27,90;UBERON:0002405,2.39e-26,93;UBERON:0002390,5.72e-25,98;UBERON:0003061,5.72e-25,98;UBERON:0001434,1.87e-24,100;UBERON:0002193,1.37e-22,108;UBERON:0002204,2.75e-14,167;UBERON:0003081,1.45e-11,203;UBERON:0000926,5.11e-07,315;UBERON:0004120,5.11e-07,315;UBERON:0006603,5.11e-07,315 | |||
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|short_description=p@chr10:64470196..64470205,+ | |short_description=p@chr10:64470196..64470205,+ | ||
}} | }} |
Latest revision as of 14:42, 23 July 2015
Short description: | p@chr10:64470196..64470205, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:64470196..64470205, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.93e-60 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.93e-60 | 42 |
defensive cell | 1.96e-52 | 48 |
phagocyte | 1.96e-52 | 48 |
monopoietic cell | 8.73e-42 | 59 |
monocyte | 8.73e-42 | 59 |
monoblast | 8.73e-42 | 59 |
promonocyte | 8.73e-42 | 59 |
macrophage dendritic cell progenitor | 2.07e-40 | 61 |
myeloid lineage restricted progenitor cell | 2.48e-37 | 66 |
granulocyte monocyte progenitor cell | 9.06e-37 | 67 |
myeloid leukocyte | 3.43e-34 | 72 |
myeloid cell | 1.37e-22 | 108 |
common myeloid progenitor | 1.37e-22 | 108 |
nongranular leukocyte | 3.64e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 3.00e-20 | 120 |
leukocyte | 9.17e-18 | 136 |
hematopoietic oligopotent progenitor cell | 7.41e-15 | 161 |
hematopoietic multipotent progenitor cell | 7.41e-15 | 161 |
hematopoietic stem cell | 3.40e-14 | 168 |
hematopoietic cell | 2.02e-13 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.28e-32 | 76 |
bone element | 5.79e-30 | 82 |
skeletal element | 3.01e-27 | 90 |
immune system | 2.39e-26 | 93 |
hematopoietic system | 5.72e-25 | 98 |
blood island | 5.72e-25 | 98 |
skeletal system | 1.87e-24 | 100 |
hemolymphoid system | 1.37e-22 | 108 |
musculoskeletal system | 2.75e-14 | 167 |
lateral plate mesoderm | 1.45e-11 | 203 |
mesoderm | 5.11e-07 | 315 |
mesoderm-derived structure | 5.11e-07 | 315 |
presumptive mesoderm | 5.11e-07 | 315 |