FFCP PHASE1:Hg19::chr3:42623766..42623775,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9117 | |EntrezGene=9117 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16828 | |HGNC=16828 | ||
|TSSclassifier=strong | |||
|UniProt=C9J448 | |UniProt=C9J448 | ||
|association_with_transcript=43bp_to_ENST00000456515_5end | |association_with_transcript=43bp_to_ENST00000456515_5end | ||
|cluster_id=chr3:42623766..42623775,- | |||
|coexpression_cluster_id=C4328 | |coexpression_cluster_id=C4328 | ||
|description=CAGE_peak_9_at_SEC22C_5end | |description=CAGE_peak_9_at_SEC22C_5end | ||
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|ontology_enrichment_celltype=CL:0000839!5.94e-24!70;CL:0002031!3.60e-23!124;CL:0000557!1.05e-21!71;CL:0002032!2.02e-19!165;CL:0000837!2.02e-19!165;CL:0000766!4.77e-19!76;CL:0000037!7.85e-19!172;CL:0000566!7.85e-19!172;CL:0000988!2.15e-18!182;CL:0002009!4.36e-18!65;CL:0002087!4.88e-18!119;CL:0000738!5.84e-18!140;CL:0002194!6.04e-18!63;CL:0000576!6.04e-18!63;CL:0000040!6.04e-18!63;CL:0000559!6.04e-18!63;CL:0000763!7.71e-18!112;CL:0000049!7.71e-18!112;CL:0000860!4.84e-15!45;CL:0002057!3.09e-14!42;CL:0000134!2.85e-07!358;CL:0002320!3.99e-07!365;CL:0000219!4.59e-07!390;CL:0002274!7.29e-07!5;CL:0000457!7.29e-07!5;CL:0002191!7.29e-07!5;CL:0000097!7.29e-07!5;CL:0000831!7.29e-07!5;CL:0002028!7.29e-07!5 | |ontology_enrichment_celltype=CL:0000839!5.94e-24!70;CL:0002031!3.60e-23!124;CL:0000557!1.05e-21!71;CL:0002032!2.02e-19!165;CL:0000837!2.02e-19!165;CL:0000766!4.77e-19!76;CL:0000037!7.85e-19!172;CL:0000566!7.85e-19!172;CL:0000988!2.15e-18!182;CL:0002009!4.36e-18!65;CL:0002087!4.88e-18!119;CL:0000738!5.84e-18!140;CL:0002194!6.04e-18!63;CL:0000576!6.04e-18!63;CL:0000040!6.04e-18!63;CL:0000559!6.04e-18!63;CL:0000763!7.71e-18!112;CL:0000049!7.71e-18!112;CL:0000860!4.84e-15!45;CL:0002057!3.09e-14!42;CL:0000134!2.85e-07!358;CL:0002320!3.99e-07!365;CL:0000219!4.59e-07!390;CL:0002274!7.29e-07!5;CL:0000457!7.29e-07!5;CL:0002191!7.29e-07!5;CL:0000097!7.29e-07!5;CL:0000831!7.29e-07!5;CL:0002028!7.29e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.42e-43;5!CL:0000163;3.21e-24;9!CL:0000764;3.12e-19;2!CL:0000558;3.12e-19;2!CL:0002566;5.78e-10;1!CL:0002581;5.78e-10;1 | |ontology_enrichment_celltype_v019=CL:0000097;1.42e-43;5!CL:0000163;3.21e-24;9!CL:0000764;3.12e-19;2!CL:0000558;3.12e-19;2!CL:0002566;5.78e-10;1!CL:0002581;5.78e-10;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,8.44e-44,5;CL:0002028,8.44e-44,5;CL:0000163,2.42e-24,9;CL:0000764,3.13e-19,2;CL:0000765,3.13e-19,2;CL:0000050,3.13e-19,2;CL:0000038,3.13e-19,2;CL:0000558,3.13e-19,2;CL:0000547,3.13e-19,2;CL:0000549,3.13e-19,2;CL:0000550,3.13e-19,2;CL:0000552,3.13e-19,2;CL:0000839,1.48e-11,66;CL:0000763,2.50e-11,108;CL:0000049,2.50e-11,108;CL:0002581,3.40e-10,1;CL:0002566,7.55e-10,1;CL:0002032,1.59e-09,161;CL:0000837,1.59e-09,161;CL:0000037,5.06e-09,168;CL:0000988,1.96e-08,177;CL:0002031,2.08e-08,120;CL:0000557,3.59e-07,67 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:8552;5.78e-10;1 | |ontology_enrichment_disease_v019=DOID:8552;5.78e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:8552,5.30e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.77e-19!80;UBERON:0002390!2.09e-18!102;UBERON:0003061!2.09e-18!102;UBERON:0001474!1.19e-17!86;UBERON:0002193!5.07e-17!112;UBERON:0004765!5.21e-16!101;UBERON:0001434!5.21e-16!101;UBERON:0002405!5.95e-14!115;UBERON:0002204!8.86e-09!167 | |ontology_enrichment_uberon=UBERON:0002371!1.77e-19!80;UBERON:0002390!2.09e-18!102;UBERON:0003061!2.09e-18!102;UBERON:0001474!1.19e-17!86;UBERON:0002193!5.07e-17!112;UBERON:0004765!5.21e-16!101;UBERON:0001434!5.21e-16!101;UBERON:0002405!5.95e-14!115;UBERON:0002204!8.86e-09!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.58e-16;4 | |ontology_enrichment_uberon_v019=UBERON:0002108;2.58e-16;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,3.19e-16,4 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,0,0.631719873426831,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0.123121058076788,0,0.313454721478088,0,0,0.125542639594803,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0.434021741431704,0.223915474239924,0.647787332037959,0.257575567634187,0.436194716338694,0,0,0.697287110717054,0.411167888021826,0.309706370895104,0.863077176966451,0.256160706529101,0.709446689665756,0.344745680736619,0.645484683583826,0,0.376484679085209,0.818718450173537,0.224723484445085,0.306083892370903,0,0,0.329851300186716,0,0.426224750532694,0.580418477257168,1.13477044938228,0.622822248995575,0.75374599577023,0.521482918420201,0.217188844705117,0,0.736555271975129,0,0.422510572623884,0.212604299965044,0.209658645508376,0.336985893439485,0.150176892841506,0,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0.954053754535364,0.569212969109448,0.587237189370939,1.52909291250092,0,0.560508562981536,0.526768169550154,0,0.786021525498329,1.02800749499755,0.501559486172034,0.977766799900771,0,0,0.222820913770347,0,0.664601683750863,0.541607727530031,0,0.130059347559878,0.164437904603676,0.552700035571697,0.289803085735052,0.296573126324121,0.802622484269139,0,0.226618685395132,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649094787309367,0.696518949197069,0.531831842075461,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.326923806226917,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337169380156203,0,0,0.217879444092406,0.237270619111097,0.404493924480493,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0,0.325808305310325,0,0,0,0,0.144366447761074,0,0,0,0,0.492434012174795,1.40402559083543,0.297262324577456,0,0.335964256397719,0,0,0,0,1.97065295158377,3.52193736052904,1.4512968087854,1.00883967391873,2.01987893482208,1.07946420296687,0.381988425558278,0,0,0.514137463516618,0.901029173531752,0.571652865261156,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0,0,0,0,0.199945982364114,0,1.00451418286425,0,0.239624855491583,0,0,0,0,0,0,0.394061520403854,0.431255149719035,0.256686072559497,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0.315404830067869,0,0,0,0,0,0.184369168541703,0,0,0,0.413536052245775,0,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,1.48418066444991,0,0,0,0.519254429183621,0,0,0.40101294060657,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.3585364227321,5.75157992254781,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0.127612712494584,0.2023155617111,0,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,0,0.159426272728822,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0,0,0,0.333698283423817,0,0.556812347790485,1.23087398947712,0.811367035427949,0,0,0,0.146508179271894,0,0.66866030566487,0,0,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0.21787692703798,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,1.16348177330109,0,0,0.335643173951685,0.948768663620925,1.11255605286265,0,0,0,0,0,0.619202951523374,0,0,0.370691816839509,0.522109747527277,0.134802265961354,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0.34945333648406,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0.176512253383001,0,0,0,0,0.195551382734803,0,0.213452994739353,0.19980960958213,0.144090417154106,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.449947783103001,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0.146552233678082,2.65013777824443,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.250381861413,0,0.110929051536852,0,0,0,0.303298235083296,0.285465333544967,0,0,0,0,0,0,0,0.50313580350515,0,0,0.151230923763239,0,0,0,0,0,0.414706207840855,0.265841714557995,0,0.300515217994437,0.380805212168795,0,0,0.322231671127465,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0.368211900503681,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0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| ||
|short_description=p9@SEC22C | |short_description=p9@SEC22C | ||
}} | }} |
Latest revision as of 06:15, 18 September 2015
Short description: | p9@SEC22C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SEC22C_5end |
Coexpression cluster: | C4328_Reticulocytes_Mast_small_Melanocyte_CD4_CD19_Macrophage |
Association with transcript: | 43bp_to_ENST00000456515_5end |
EntrezGene: | SEC22C |
HGNC: | 16828 |
UniProt: | C9J448 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 8.44e-44 | 5 |
basophil mast progenitor cell | 8.44e-44 | 5 |
endocrine cell | 2.42e-24 | 9 |
erythroid lineage cell | 3.13e-19 | 2 |
erythroblast | 3.13e-19 | 2 |
megakaryocyte-erythroid progenitor cell | 3.13e-19 | 2 |
erythroid progenitor cell | 3.13e-19 | 2 |
reticulocyte | 3.13e-19 | 2 |
proerythroblast | 3.13e-19 | 2 |
basophilic erythroblast | 3.13e-19 | 2 |
polychromatophilic erythroblast | 3.13e-19 | 2 |
orthochromatic erythroblast | 3.13e-19 | 2 |
myeloid lineage restricted progenitor cell | 1.48e-11 | 66 |
myeloid cell | 2.50e-11 | 108 |
common myeloid progenitor | 2.50e-11 | 108 |
perirenal preadipocyte | 3.40e-10 | 1 |
dark melanocyte | 7.55e-10 | 1 |
hematopoietic oligopotent progenitor cell | 1.59e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.59e-09 | 161 |
hematopoietic stem cell | 5.06e-09 | 168 |
hematopoietic cell | 1.96e-08 | 177 |
hematopoietic lineage restricted progenitor cell | 2.08e-08 | 120 |
granulocyte monocyte progenitor cell | 3.59e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
small intestine | 3.19e-16 | 4 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 5.30e-10 | 1 |