FFCP PHASE1:Hg19::chr19:50168861..50168873,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3661 | |EntrezGene=3661 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6118 | |HGNC=6118 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=240bp_to_uc002pox.1,uc002poy.1,uc002poz.1,uc010end.1_5end | |association_with_transcript=240bp_to_uc002pox.1,uc002poy.1,uc002poz.1,uc010end.1_5end | ||
|cluster_id=chr19:50168861..50168873,- | |||
|description=CAGE_peak_3_at_IRF3_5end | |description=CAGE_peak_3_at_IRF3_5end | ||
|id=chr19:50168861..50168873,- | |id=chr19:50168861..50168873,- | ||
|ontology_enrichment_celltype=CL:0000542!2.15e-12!53;CL:0000051!2.15e-12!53;CL:0000838!3.02e-12!52;CL:0000037!1.18e-08!172;CL:0000566!1.18e-08!172;CL:0002032!5.79e-08!165;CL:0000837!5.79e-08!165;CL:0000988!3.25e-07!182 | |ontology_enrichment_celltype=CL:0000542!2.15e-12!53;CL:0000051!2.15e-12!53;CL:0000838!3.02e-12!52;CL:0000037!1.18e-08!172;CL:0000566!1.18e-08!172;CL:0002032!5.79e-08!165;CL:0000837!5.79e-08!165;CL:0000988!3.25e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000542;2.23e-08;53!CL:0000084;1.28e-07;25!CL:0000791;3.83e-07;18!CL:0000789;3.83e-07;18!CL:0002419;3.83e-07;18 | |ontology_enrichment_celltype_v019=CL:0000542;2.23e-08;53!CL:0000084;1.28e-07;25!CL:0000791;3.83e-07;18!CL:0000789;3.83e-07;18!CL:0002419;3.83e-07;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.06e-14,53;CL:0000051,2.06e-14,53;CL:0000838,3.29e-14,52;CL:0000037,3.34e-11,168;CL:0002032,3.43e-10,161;CL:0000837,3.43e-10,161;CL:0000988,9.51e-10,177;CL:0000738,5.43e-08,136;CL:0000084,7.15e-08,25;CL:0000827,7.15e-08,25;CL:0000791,1.39e-07,18;CL:0000789,1.39e-07,18;CL:0002420,1.39e-07,18;CL:0002419,1.39e-07,18;CL:0000790,1.39e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;2.23e-08;53!CL:0000790;3.83e-07;18 | |ontology_enrichment_development_v019=CL:0000051;2.23e-08;53!CL:0000790;3.83e-07;18 | ||
|ontology_enrichment_disease=DOID:0050686!9.14e-07!137 | |ontology_enrichment_disease=DOID:0050686!9.14e-07!137 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:2531,3.07e-07,51;DOID:0060083,3.07e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0000178!3.68e-07!15;UBERON:0000179!3.68e-07!15;UBERON:0000463!3.68e-07!15 | |ontology_enrichment_uberon=UBERON:0000178!3.68e-07!15;UBERON:0000179!3.68e-07!15;UBERON:0000463!3.68e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.50e-07;15!UBERON:0000179;1.50e-07;15!UBERON:0000463;1.50e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.50e-07;15!UBERON:0000179;1.50e-07;15!UBERON:0000463;1.50e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.75e-08,15;UBERON:0000179,4.75e-08,15;UBERON:0000463,4.75e-08,15 | |||
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| ||
|short_description=p3@IRF3 | |short_description=p3@IRF3 | ||
}} | }} |
Latest revision as of 08:35, 19 September 2015
Short description: | p3@IRF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IRF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 240bp_to_uc002pox.1, uc002poy.1, uc002poz.1, uc010end.1_5end |
EntrezGene: | IRF3 |
HGNC: | 6118 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.06e-14 | 53 |
common lymphoid progenitor | 2.06e-14 | 53 |
lymphoid lineage restricted progenitor cell | 3.29e-14 | 52 |
hematopoietic stem cell | 3.34e-11 | 168 |
hematopoietic oligopotent progenitor cell | 3.43e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.43e-10 | 161 |
hematopoietic cell | 9.51e-10 | 177 |
leukocyte | 5.43e-08 | 136 |
T cell | 7.15e-08 | 25 |
pro-T cell | 7.15e-08 | 25 |
mature alpha-beta T cell | 1.39e-07 | 18 |
alpha-beta T cell | 1.39e-07 | 18 |
immature T cell | 1.39e-07 | 18 |
mature T cell | 1.39e-07 | 18 |
immature alpha-beta T cell | 1.39e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
blood | 4.75e-08 | 15 |
haemolymphatic fluid | 4.75e-08 | 15 |
organism substance | 4.75e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.07e-07 | 51 |
immune system cancer | 3.07e-07 | 51 |