FFCP PHASE1:Hg19::chr22:50964849..50964903,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:50964849..50964903,-
|short_description=p3@SCO2
|description=CAGE_peak_3_at_SCO2_5end
|association_with_transcript=0bp_to_ENST00000423348,ENST00000543927,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9997 | |EntrezGene=9997 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10604 | |HGNC=10604 | ||
|TSSclassifier=strong | |||
|UniProt=C9JBU1,O43819 | |UniProt=C9JBU1,O43819 | ||
|association_with_transcript=0bp_to_ENST00000423348,ENST00000543927,NM_001169109_5end | |||
|cluster_id=chr22:50964849..50964903,- | |||
|description=CAGE_peak_3_at_SCO2_5end | |||
|id=chr22:50964849..50964903,- | |||
|ontology_enrichment_celltype=CL:0000548!9.04e-23!679;CL:0000004!9.04e-23!679;CL:0000255!9.04e-23!679;CL:0000012!2.95e-22!682;CL:0002371!3.36e-19!591;CL:0000003!4.55e-19!722;CL:0000144!3.29e-16!625;CL:0000063!1.21e-15!578;CL:0000723!4.07e-14!436;CL:0000048!5.19e-14!430;CL:0000034!4.37e-12!444;CL:0000988!1.34e-10!182;CL:0000134!2.23e-10!358;CL:0002320!8.24e-10!365;CL:0002032!8.88e-10!165;CL:0000837!8.88e-10!165;CL:0000763!9.56e-10!112;CL:0000049!9.56e-10!112;CL:0000037!1.13e-09!172;CL:0000566!1.13e-09!172;CL:0000219!2.02e-08!390;CL:0000766!2.28e-08!76;CL:0000738!2.71e-07!140 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,1.25e-11,433;CL:0000048,1.36e-11,427;CL:0000034,3.51e-10,441;CL:0000988,1.92e-09,177;CL:0002032,6.51e-09,161;CL:0000837,6.51e-09,161;CL:0000763,7.14e-09,108;CL:0000049,7.14e-09,108;CL:0000037,7.75e-09,168;CL:0000134,1.19e-08,354;CL:0002320,4.45e-08,361;CL:0000766,1.26e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.62e-09!375;UBERON:0003081!2.85e-08!216;UBERON:0002204!1.51e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.93e-09,203;UBERON:0002384,8.48e-08,371;UBERON:0000926,3.50e-07,315;UBERON:0004120,3.50e-07,315;UBERON:0006603,3.50e-07,315 | |||
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| ||
|short_description=p3@SCO2 | |||
}} | }} |
Latest revision as of 20:50, 15 September 2015
Short description: | p3@SCO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SCO2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000423348, ENST00000543927, NM_001169109_5end |
EntrezGene: | SCO2 |
HGNC: | 10604 |
UniProt: | C9JBU1O43819 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 1.25e-11 | 433 |
multi fate stem cell | 1.36e-11 | 427 |
stem cell | 3.51e-10 | 441 |
hematopoietic cell | 1.92e-09 | 177 |
hematopoietic oligopotent progenitor cell | 6.51e-09 | 161 |
hematopoietic multipotent progenitor cell | 6.51e-09 | 161 |
myeloid cell | 7.14e-09 | 108 |
common myeloid progenitor | 7.14e-09 | 108 |
hematopoietic stem cell | 7.75e-09 | 168 |
mesenchymal cell | 1.19e-08 | 354 |
connective tissue cell | 4.45e-08 | 361 |
myeloid leukocyte | 1.26e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.93e-09 | 203 |
connective tissue | 8.48e-08 | 371 |
mesoderm | 3.50e-07 | 315 |
mesoderm-derived structure | 3.50e-07 | 315 |
presumptive mesoderm | 3.50e-07 | 315 |