FFCP PHASE1:Hg19::chr2:100758991..100759009,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:100758991..100759009,-
|short_description=p3@AFF3
|description=CAGE_peak_3_at_AFF3_5end
|association_with_transcript=27bp_to_ENST00000317233,ENST0000042396...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3899 | |EntrezGene=3899 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6473 | |HGNC=6473 | ||
|TSSclassifier=strong | |||
|UniProt=P51826,C9JC67 | |UniProt=P51826,C9JC67 | ||
|association_with_transcript=27bp_to_ENST00000317233,ENST00000423966,NM_002285,uc002tag.2_5end | |||
|cluster_id=chr2:100758991..100759009,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_3_at_AFF3_5end | |||
|id=chr2:100758991..100759009,- | |||
|ontology_enrichment_celltype=CL:0000542!3.09e-31!53;CL:0000051!3.09e-31!53;CL:0000838!6.91e-30!52;CL:0000037!2.81e-27!172;CL:0000566!2.81e-27!172;CL:0000988!1.20e-24!182;CL:0000236!1.53e-24!14;CL:0000738!8.15e-24!140;CL:0002087!3.09e-22!119;CL:0002032!2.74e-21!165;CL:0000837!2.74e-21!165;CL:0000945!4.82e-21!24;CL:0000826!4.82e-21!24;CL:0002031!2.05e-16!124;CL:0000791!1.40e-09!18;CL:0000789!1.40e-09!18;CL:0002420!1.40e-09!18;CL:0002419!1.40e-09!18;CL:0000790!1.40e-09!18;CL:0000084!1.11e-08!25;CL:0000827!1.11e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.98e-41;13!CL:0000945;9.09e-32;24!CL:0000542;1.16e-17;53!CL:0000784;1.64e-10;3!CL:0000226;5.46e-09;3!CL:0000842;5.46e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,4.69e-38,14;CL:0000945,9.20e-32,24;CL:0000826,9.20e-32,24;CL:0000542,3.28e-21,53;CL:0000051,3.28e-21,53;CL:0000838,1.64e-19,52;CL:0000037,1.38e-16,168;CL:0000988,2.91e-15,177;CL:0000738,1.29e-11,136;CL:0000784,1.66e-10,3;CL:0002087,1.96e-10,115;CL:0002032,2.33e-10,161;CL:0000837,2.33e-10,161;CL:0000226,4.21e-09,3;CL:0000842,4.21e-09,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.16e-17;53 | |||
|ontology_enrichment_disease=DOID:2531!1.71e-09!51;DOID:0060083!1.71e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.05e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.45e-09,51;DOID:0060083,1.45e-09,51;DOID:0060058,1.11e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!8.89e-12!15;UBERON:0000179!8.89e-12!15;UBERON:0000463!8.89e-12!15;UBERON:0002390!7.46e-07!102;UBERON:0003061!7.46e-07!102;UBERON:0002193!7.92e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;2.02e-21;32!UBERON:0000178;3.06e-21;15!UBERON:0000179;3.06e-21;15!UBERON:0000463;3.06e-21;15!UBERON:0002193;5.07e-15;42!UBERON:0004177;1.50e-10;5!UBERON:0005057;1.50e-10;5!UBERON:0002370;1.75e-07;2!UBERON:0005058;1.75e-07;2!UBERON:0009113;1.75e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.61e-21,15;UBERON:0000179,2.61e-21,15;UBERON:0000463,2.61e-21,15;UBERON:0004177,6.20e-11,7;UBERON:0005057,6.20e-11,7;UBERON:0002370,2.02e-07,4;UBERON:0005058,2.02e-07,4;UBERON:0009113,2.02e-07,4;UBERON:0003295,2.02e-07,4;UBERON:0005562,2.02e-07,4;UBERON:0002193,7.06e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.464448369948228,0,0,0,21.4584145607436,9.95184627411951,5.28480790802725,0,0.401088894940283,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0.641858054152187,0,0,0.398927315243264,0,0,0,0,0,0,0,0,0.736555271975129,0,0,0,0,0.112328631146495,0,0,0,0,0,72.1584602291423,55.1599997374753,42.6964441854506,54.6214684885129,60.4597940424379,65.5217781548111,56.8498590594981,57.2432252721218,48.9523153434126,35.8214685516273,51.2246125687807,6.60856642895129,1.12101712596307,7.11137028892708,2.360517241366,0.786021525498329,0,0,4.23698946623668,3.78758244587787,3.89653456815823,0,0.883817722424512,0.221533894583621,0,0,0,0,0.276350017785848,0,2.96573126324121,3.74557159325598,2.09071047609954,0,1.14966148080576,0.68725489096526,2.78321661221453,0.637130828648193,0,0.950452044448374,0.602300476311091,0.511946444617674,0,0.947109008176067,0.821127996921047,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5479280826259,16.0158575018436,16.3441300585009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09024169590255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.431255149719035,0.256686072559497,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54889657470352,1.94142780736755,1.921096040462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55213326462519,6.117097657139,2.84823593587081,6.19402616190251,13.5749550118444,2.59389324477087,4.86028293514303,2.37937552888281,0,0,0,8.54694605578306,7.21346064882224,0,0.797131363644112,0.399158742865633,0,0,0,1.68478306868075,7.75997908712854,0,0,0.677167111206413,1.76646882614069,2.82519590067467,3.40676990152261,0,0.614481528616916,0.223676107892416,0.500547425135725,1.36771666781428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.84108529699673,0,0,0,0,0,0,6.65044081294933,1.28236427328014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0,0,0,18.4279337107823,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.581934098930517,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,24.2718517327247,0,0,0,0,0,0,0,0,0.335917362433631,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0.157611414598396,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0.213574825135389,0.471612915298998,0.414239055347196,3.96932817449561,0,7.18576330447286,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.70324832510653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0,0.806637912890455,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0.655678681511872,0,0,0,0,0,0,0,9.21042396202565,10.7644672915874,0,0,0,0,0.730336388246517,1.37618785021362,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.952257725854961,11.4322370409731,14.9600061453018,0,0,0,0,0,7.47607788461922,0.215166616178029,0.665320713092027,0,0,0,0,0,0.122241444182866,0.406896178315738,0,11.2713324410975,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.464448369948228,0,0,0,21.4584145607436,9.95184627411951,5.28480790802725,0,0.401088894940283,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0.641858054152187,0,0,0.398927315243264,0,0,0,0,0,0,0,0,0.736555271975129,0,0,0,0,0.112328631146495,0,0,0,0,0,72.1584602291423,55.1599997374753,42.6964441854506,54.6214684885129,60.4597940424379,65.5217781548111,56.8498590594981,57.2432252721218,48.9523153434126,35.8214685516273,51.2246125687807,6.60856642895129,1.12101712596307,7.11137028892708,2.360517241366,0.786021525498329,0,0,4.23698946623668,3.78758244587787,3.89653456815823,0,0.883817722424512,0.221533894583621,0,0,0,0,0.276350017785848,0,2.96573126324121,3.74557159325598,2.09071047609954,0,1.14966148080576,0.68725489096526,2.78321661221453,0.637130828648193,0,0.950452044448374,0.602300476311091,0.511946444617674,0,0.947109008176067,0.821127996921047,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5479280826259,16.0158575018436,16.3441300585009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09024169590255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.431255149719035,0.256686072559497,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54889657470352,1.94142780736755,1.921096040462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55213326462519,6.117097657139,2.84823593587081,6.19402616190251,13.5749550118444,2.59389324477087,4.86028293514303,2.37937552888281,0,0,0,8.54694605578306,7.21346064882224,0,0.797131363644112,0.399158742865633,0,0,0,1.68478306868075,7.75997908712854,0,0,0.677167111206413,1.76646882614069,2.82519590067467,3.40676990152261,0,0.614481528616916,0.223676107892416,0.500547425135725,1.36771666781428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.84108529699673,0,0,0,0,0,0,6.65044081294933,1.28236427328014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0,0,0,18.4279337107823,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.581934098930517,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,24.2718517327247,0,0,0,0,0,0,0,0,0.335917362433631,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0.157611414598396,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0.213574825135389,0.471612915298998,0.414239055347196,3.96932817449561,0,7.18576330447286,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.70324832510653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0,0.806637912890455,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0.655678681511872,0,0,0,0,0,0,0,9.21042396202565,10.7644672915874,0,0,0,0,0.730336388246517,1.37618785021362,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.952257725854961,11.4322370409731,14.9600061453018,0,0,0,0,0,7.47607788461922,0.215166616178029,0.665320713092027,0,0,0,0,0,0.122241444182866,0.406896178315738,0,11.2713324410975,0 | ||
|short_description=p3@AFF3 | |||
}} | }} |
Latest revision as of 22:41, 15 September 2015
Short description: | p3@AFF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AFF3_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 27bp_to_ENST00000317233, ENST00000423966, NM_002285, uc002tag.2_5end |
EntrezGene: | AFF3 |
HGNC: | 6473 |
UniProt: | P51826C9JC67 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 4.69e-38 | 14 |
lymphocyte of B lineage | 9.20e-32 | 24 |
pro-B cell | 9.20e-32 | 24 |
lymphocyte | 3.28e-21 | 53 |
common lymphoid progenitor | 3.28e-21 | 53 |
lymphoid lineage restricted progenitor cell | 1.64e-19 | 52 |
hematopoietic stem cell | 1.38e-16 | 168 |
hematopoietic cell | 2.91e-15 | 177 |
leukocyte | 1.29e-11 | 136 |
plasmacytoid dendritic cell | 1.66e-10 | 3 |
nongranular leukocyte | 1.96e-10 | 115 |
hematopoietic oligopotent progenitor cell | 2.33e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.33e-10 | 161 |
single nucleate cell | 4.21e-09 | 3 |
mononuclear cell | 4.21e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 2.61e-21 | 15 |
haemolymphatic fluid | 2.61e-21 | 15 |
organism substance | 2.61e-21 | 15 |
hemopoietic organ | 6.20e-11 | 7 |
immune organ | 6.20e-11 | 7 |
thymus | 2.02e-07 | 4 |
hemolymphoid system gland | 2.02e-07 | 4 |
thymic region | 2.02e-07 | 4 |
pharyngeal gland | 2.02e-07 | 4 |
thymus primordium | 2.02e-07 | 4 |
hemolymphoid system | 7.06e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.45e-09 | 51 |
immune system cancer | 1.45e-09 | 51 |
lymphoma | 1.11e-07 | 10 |