FF:91-2I7: Difference between revisions

Latest revision as of 19:21, 4 June 2020

Name:	ovary, adult
Species:	Mouse (Mus musculus)
Library ID:	CNhs10507
Sample type:	developmental
Genomic View:	UCSC
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	C57BL/6J
tissue	ovary
dev stage	adult
sex	female
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	NA

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005245

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs10507		CAGE		DRX009050		DRR009924

Accession ID Mm9

Library id		BAM		CTSS
CNhs10507		DRZ001349		DRZ002732

Accession ID Mm10

Library id		BAM		CTSS
CNhs10507		DRZ012699		DRZ014082

Download raw sequence, BAM & CTSS

Mm9

Fasta	BAM	CTSS
download	download	donwload

Mm10

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

CNhs10507

0	0
1	0
10	0
100	0
1000	0.0576
1001	0.0957
1002	0.0994
1003	0.149
1004	0.974
1005	0
1006	0.0119
1007	0.0232
1008	0
1009	0.325
101	0.0362
1010	0
1011	0.0576
1012	0
1013	0.0652
1014	-0.0275
1015	-0.0815
1016	0.0326
1017	0
1018	0
1019	0
102	0
1020	0
1021	0
1022	0.351
1023	0
1024	0.168
1025	0.0576
1026	0
1027	0
1028	0.109
1029	0.0184
103	0.0576
1030	0
1031	0.249
1032	0.091
1033	0.0576
1034	0.0576
1035	0.0576
1036	-0.106
1037	0
1038	0.0561
1039	0.153
104	0
1040	0.237
1041	0.815

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10507

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.224
MA0003.1	MA0003.1	0.0512
MA0004.1	MA0004.1	0.395
MA0006.1	MA0006.1	0.135
MA0007.1	MA0007.1	0.903
MA0009.1	MA0009.1	0.929
MA0014.1	MA0014.1	0.829
MA0017.1	MA0017.1	1.53374e-4
MA0018.2	MA0018.2	0.05
MA0019.1	MA0019.1	0.568
MA0024.1	MA0024.1	0.0503
MA0025.1	MA0025.1	0.0191
MA0027.1	MA0027.1	0.944
MA0028.1	MA0028.1	0.00764
MA0029.1	MA0029.1	0.7
MA0030.1	MA0030.1	0.176
MA0031.1	MA0031.1	0.161
MA0035.2	MA0035.2	0.183
MA0038.1	MA0038.1	9.33449e-4
MA0039.2	MA0039.2	0.0177
MA0040.1	MA0040.1	0.189
MA0041.1	MA0041.1	0.36
MA0042.1	MA0042.1	0.788
MA0043.1	MA0043.1	0.536
MA0046.1	MA0046.1	4.47539e-9
MA0047.2	MA0047.2	0.707
MA0048.1	MA0048.1	0.203
MA0050.1	MA0050.1	1.53208e-4
MA0051.1	MA0051.1	0.00135
MA0052.1	MA0052.1	0.448
MA0055.1	MA0055.1	0.151
MA0057.1	MA0057.1	0.866
MA0058.1	MA0058.1	0.346
MA0059.1	MA0059.1	0.0159
MA0060.1	MA0060.1	0.99
MA0061.1	MA0061.1	0.765
MA0062.2	MA0062.2	0.00778
MA0065.2	MA0065.2	0.659
MA0066.1	MA0066.1	0.0169
MA0067.1	MA0067.1	0.673
MA0068.1	MA0068.1	0.216
MA0069.1	MA0069.1	0.794
MA0070.1	MA0070.1	0.411
MA0071.1	MA0071.1	0.857
MA0072.1	MA0072.1	0.578
MA0073.1	MA0073.1	0.89
MA0074.1	MA0074.1	0.627
MA0076.1	MA0076.1	0.0765
MA0077.1	MA0077.1	0.393
MA0078.1	MA0078.1	0.0018
MA0079.2	MA0079.2	0.0168
MA0080.2	MA0080.2	0.674
MA0081.1	MA0081.1	0.809
MA0083.1	MA0083.1	7.5881e-6
MA0084.1	MA0084.1	0.665
MA0087.1	MA0087.1	0.989
MA0088.1	MA0088.1	0.881
MA0090.1	MA0090.1	0.688
MA0091.1	MA0091.1	0.0405
MA0092.1	MA0092.1	0.254
MA0093.1	MA0093.1	0.523
MA0099.2	MA0099.2	0.466
MA0100.1	MA0100.1	0.439
MA0101.1	MA0101.1	0.809
MA0102.2	MA0102.2	0.638
MA0103.1	MA0103.1	0.0819
MA0104.2	MA0104.2	0.0603
MA0105.1	MA0105.1	0.0204
MA0106.1	MA0106.1	0.323
MA0107.1	MA0107.1	0.725
MA0108.2	MA0108.2	0.0417
MA0111.1	MA0111.1	0.388
MA0112.2	MA0112.2	0.456
MA0113.1	MA0113.1	0.758
MA0114.1	MA0114.1	0.0033
MA0115.1	MA0115.1	0.00333
MA0116.1	MA0116.1	0.0966
MA0117.1	MA0117.1	0.692
MA0119.1	MA0119.1	0.326
MA0122.1	MA0122.1	0.993
MA0124.1	MA0124.1	0.85
MA0125.1	MA0125.1	0.788
MA0131.1	MA0131.1	0.459
MA0135.1	MA0135.1	0.405
MA0136.1	MA0136.1	0.957
MA0137.2	MA0137.2	0.407
MA0138.2	MA0138.2	0.88
MA0139.1	MA0139.1	0.519
MA0140.1	MA0140.1	0.0441
MA0141.1	MA0141.1	0.849
MA0142.1	MA0142.1	0.434
MA0143.1	MA0143.1	0.356
MA0144.1	MA0144.1	0.573
MA0145.1	MA0145.1	0.0567
MA0146.1	MA0146.1	0.274
MA0147.1	MA0147.1	0.0208
MA0148.1	MA0148.1	0.548
MA0149.1	MA0149.1	0.141
MA0150.1	MA0150.1	0.85
MA0152.1	MA0152.1	0.205
MA0153.1	MA0153.1	1.36444e-6
MA0154.1	MA0154.1	0.802
MA0155.1	MA0155.1	0.705
MA0156.1	MA0156.1	0.568
MA0157.1	MA0157.1	0.00738
MA0159.1	MA0159.1	0.00265
MA0160.1	MA0160.1	0.844
MA0162.1	MA0162.1	0.68
MA0163.1	MA0163.1	0.0834
MA0164.1	MA0164.1	0.215
MA0258.1	MA0258.1	0.979
MA0259.1	MA0259.1	0.062

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10507

Novel motif	Logo	P-value
1	1	0.147
10	10	0.0897
100	100	0.167
101	101	0.488
102	102	0.785
103	103	0.313
104	104	0.632
105	105	0.661
106	106	0.681
107	107	0.345
108	108	0.725
109	109	0.825
11	11	0.224
110	110	0.743
111	111	0.288
112	112	0.577
113	113	0.924
114	114	0.104
115	115	0.556
116	116	0.301
117	117	0.0025
118	118	0.221
119	119	0.923
12	12	0.51
120	120	0.0654
121	121	0.0464
122	122	0.381
123	123	0.459
124	124	0.643
125	125	0.15
126	126	0.242
127	127	0.368
128	128	0.67
129	129	0.94
13	13	0.833
130	130	0.151
131	131	0.0589
132	132	0.926
133	133	0.493
134	134	0.529
135	135	0.653
136	136	0.105
137	137	0.672
138	138	0.0501
139	139	0.884
14	14	0.702
140	140	0.911
141	141	0.144
142	142	0.373
143	143	0.122
144	144	0.365
145	145	0.641
146	146	0.404
147	147	0.435
148	148	0.898
149	149	0.139
15	15	0.662
150	150	0.351
151	151	0.604
152	152	0.0253
153	153	0.807
154	154	0.892
155	155	0.511
156	156	0.0906
157	157	0.502
158	158	0.12
159	159	0.15
160	160	0.365
161	161	0.555
162	162	0.701
163	163	0.501
164	164	0.208
165	165	0.863
166	166	0.119
167	167	0.00973
168	168	0.436
169	169	0.0949
17	17	0.602
18	18	0.0233
19	19	0.0952
2	2	0.069
20	20	0.0786
21	21	0.799
22	22	0.404
23	23	0.896
24	24	0.297
25	25	0.405
26	26	0.966
27	27	0.585
28	28	0.923
29	29	0.121
3	3	0.388
30	30	0.197
31	31	0.496
32	32	0.0478
33	33	0.537
34	34	0.707
35	35	0.0374
36	36	0.0075
37	37	0.855
38	38	0.845
39	39	0.931
4	4	0.492
40	40	0.351
41	41	0.0875
42	42	0.667
43	43	0.356
44	44	0.397
45	45	0.295
46	46	0.418
47	47	0.856
48	48	0.655
49	49	0.0374
5	5	0.267
50	50	0.615
51	51	0.842
52	52	0.407
53	53	0.109
54	54	0.571
55	55	0.765
56	56	0.811
57	57	0.177
58	58	0.786
59	59	0.585
6	6	0.77
60	60	0.918
61	61	0.687
62	62	0.289
63	63	0.88
64	64	0.352
65	65	0.795
66	66	0.926
67	67	0.557
68	68	0.17
69	69	0.433
7	7	0.729
70	70	0.429
71	71	0.0774
72	72	0.62
73	73	0.555
74	74	0.67
75	75	0.0812
76	76	3.99234e-4
77	77	0.282
78	78	0.279
79	79	0.72
8	8	0.0815
80	80	0.371
81	81	0.74
82	82	0.306
83	83	0.16
84	84	0.4
85	85	0.913
86	86	0.917
87	87	0.16
88	88	0.722
89	89	0.934
9	9	0.434
90	90	0.0139
91	91	0.267
92	92	0.321
93	93	0.171
94	94	0.151
95	95	0.409
96	96	0.143
97	97	0.0845
98	98	0.416
99	99	0.254

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10507

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0011439 mouse ovary- adult sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000992 (female gonad)
0000991 (gonad)
0003134 (female reproductive organ)
0000479 (tissue)
0005156 (reproductive structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0003100 (female organism)
0000474 (female reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0011439 (mouse ovary- adult sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0009117 (indifferent gonad)
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0005564 (gonad primordium)
UBERON:0010316 (germ layer / neural crest)

@@ Line 1: / Line 1: @@
 {{f5samples
+|DRA_sample_Accession=CAGE@SAMD00005245
+|accession_numbers=CAGE;DRX009050;DRR009924;DRZ001349;DRZ002732;DRZ012699;DRZ014082
 |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000992,UBERON:0000991,UBERON:0003134,UBERON:0000479,UBERON:0005156,UBERON:0000466,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0002323,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0003100,UBERON:0000474
 |ancestors_in_cell_lineage_facet=
@@ Line 7: / Line 9: @@
 |created_by=
 |creation_date=
-|datafreeze_phase=1
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr12:77278238..77278252,-!p1@Esr2!2.02!103.33!Esr2;;chr2:38570011..38570034,-!p1@Nr5a1!1.95!87.15!Nr5a1;;chr10:5636354..5636373,-!p2@Esr1!1.84!67.85!Esr1;;chr15:102828658..102828678,+!p1@Hoxc6!1.79!60.32!Hoxc6;;chr10:5636374..5636421,-!p1@Esr1!1.74!67.14!Esr1;;chr1:138846009..138846038,-!p3@Nr5a2!1.65!48.83!Nr5a2;;chr14:63864056..63864102,-!p1@Gata4!1.59!64.16!Gata4;;chr2:104966766..104966786,+!p1@Wt1!1.53!50.81!Wt1;;chr11:116196664..116196679,-!p1@Foxj1!1.47!43.58!Foxj1;;chr17:44951553..44951586,-!p2@Runx2!1.47!31.37!Runx2;;chr13:96093557..96093561,+!p6@Zbed3!1.44!26.83!Zbed3;;chr19:59533221..59533271,+!p1@Emx2!1.42!30.66!Emx2;;chr2:103143336..103143367,-!p1@Ehf!1.40!38.75!Ehf;;chr10:22539932..22539956,-!p1@Tcf21!1.39!60.75!Tcf21;;chr9:20764229..20764236,-!p7@Dnmt1!1.39!23.42!Dnmt1;;chr1:140739014..140739032,-!p1@Lhx9!1.38!29.24!Lhx9;;chrX:90531838..90531861,+!p1@Arx!1.38!28.81!Arx;;chrX:45245679..45245702,-!p1@Smarca1!1.37!98.36!Smarca1;;chr9:98855868..98855895,+!p1@Foxl2!1.37!22.43!Foxl2;;chr9:8900459..8900489,+!p1@Pgr!1.34!20.87!Pgr;;chr15:35225845..35225867,+!p1@Osr2!1.31!48.54!Osr2;;chr1:138846047..138846074,-!p5@Nr5a2!1.24!17.74!Nr5a2;;chrX:58146612..58146615,-!p1@Sox3!1.24!16.32!Sox3;;chr17:44951431..44951445,-!p3@Runx2!1.23!15.90!Runx2;;chr1:138845748..138845766,-!p4@Nr5a2!1.22!20.16!Nr5a2;;chr1:137155026..137155042,-!p1@Elf3!1.21!87.58!Elf3;;chr2:74549968..74549996,+!p1@Hoxd3!1.20!18.45!Hoxd3;;chr14:63864337..63864381,-!p6@Gata4!1.17!13.77!Gata4;;chr18:52775562..52775650,+!p1@Zfp474!1.16!13.34!Zfp474;;chr9:98855692..98855710,+!p2@Foxl2!1.13!12.49!Foxl2;;chr2:74529970..74529997,+!p1@Hoxd10!1.13!12.35!Hoxd10;;chr11:5761979..5761992,+!p2@Aebp1!1.11!24.13!Aebp1;;chr2:77357622..77357704,-!p1@Zfp385b!1.10!31.65!Zfp385b;;chr5:31271028..31271040,+!p1@Tcf23!1.10!11.64!Tcf23;;chr11:5761889..5761969,+!p1@Aebp1!1.08!460.45!Aebp1;;chr9:98855847..98855866,+!p3@Foxl2!1.07!10.79!Foxl2;;chr1:138846079..138846103,-!p6@Nr5a2!1.07!10.65!Nr5a2;;chr1:138846117..138846129,-!p8@Nr5a2!1.06!10.36!Nr5a2;;chr15:102828642..102828653,+!p2@Hoxc6!1.04!9.94!Hoxc6;;chr2:24331085..24331100,-!p1@Pax8!1.02!9.37!Pax8;;chr3:52072329..52072346,+!p1@Foxo1!1.00!140.52!Foxo1;;chr9:8900409..8900425,+!p2@Pgr!1.00!8.94!Pgr;;chr2:103143315..103143328,-!p2@Ehf!1.00!8.94!Ehf;;chr2:74536026..74536039,+!p1@Hoxd9!0.98!8.66!Hoxd9;;chr16:43363190..43363242,+!p2@Zbtb20!0.95!24.84!Zbtb20;;chr4:84320893..84320910,-!p1@Bnc2!0.95!17.88!Bnc2;;chr10:5734525..5734569,-!p3@Esr1!0.95!13.20!Esr1;;chrX:83437105..83437121,+!p1@Nr0b1!0.95!7.95!Nr0b1;;chr2:104966874..104966907,+!p2@Wt1!0.93!7.52!Wt1;;chr9:8899828..8899855,+!p3@Pgr!0.92!7.38!Pgr;;chr11:98636531..98636559,-!p1@Nr1d1!0.89!40.17!Nr1d1;;chrX:66613481..66613562,+!p1@Aff2!0.89!30.23!Aff2;;chr6:52163319..52163342,-!p1@Hoxa3!0.89!10.08!Hoxa3;;chr2:77541432..77541474,-!p5@Zfp385b!0.89!6.81!Zfp385b;;chr18:7004715..7004731,-!p1@Mkx!0.88!16.47!Mkx;;chrX:95345005..95345053,+!p1@Ar!0.88!6.67!Ar;;chr9:98855944..98855971,+!p4@Foxl2!0.88!6.53!Foxl2;;chr16:92697560..92697592,-!p2@Runx1!0.87!42.01!Runx1;;chr11:96143666..96143725,+!p1@Hoxb8!0.87!7.52!Hoxb8;;chr10:5636678..5636725,-!p6@Esr1!0.87!6.39!Esr1;;chr2:163028808..163028869,+!p1@Tox2!0.86!23.56!Tox2;;chr2:104966933..104966966,+!p3@Wt1!0.86!6.25!Wt1;;chr2:74550015..74550057,+!p2@Hoxd3!0.86!6.25!Hoxd3;;chr1:4483679..4483695,-!p1@Sox17!0.85!30.09!Sox17;;chr19:59532915..59532940,+!p5@Emx2!0.85!6.10!Emx2;;chr6:6832076..6832092,-!p1@Dlx5!0.84!6.96!Dlx5;;chr2:104966662..104966673,+!p4@Wt1!0.84!5.96!Wt1;;chr6:52190467..52190500,-!p1@Hoxa10!0.83!5.82!Hoxa10;;chr19:59533139..59533152,+!p2@Emx2!0.82!5.68!Emx2;;chr2:74536050..74536065,+!p2@Hoxd9!0.82!5.54!Hoxd9;;chr17:27865882..27865901,-!p1@Spdef!0.82!5.54!Spdef;;chr10:88996295..88996335,-!p3@Nr1h4!0.81!6.67!Nr1h4;;chr10:5734473..5734489,-!p5@Esr1!0.79!5.11!Esr1;;chr7:52960555..52960662,+!p1@Dbp!0.78!46.70!Dbp;;chr11:98636508..98636524,-!p3@Nr1d1!0.78!6.39!Nr1d1;;chr14:63890459..63890484,-!p4@Gata4!0.78!4.97!Gata4;;chr12:77278048..77278058,-!p2@Esr2!0.78!4.97!Esr2;;chr16:42907676..42907797,+!p1@Zbtb20!0.77!69.12!Zbtb20;;chr11:96153767..96153822,+!p1@Hoxb6!0.77!7.95!Hoxb6;;chr6:52176164..52176195,-!p1@Hoxa9!0.77!6.25!Hoxa9;;chr4:84192360..84192376,-!p8@Bnc2!0.77!4.83!Bnc2;;chr15:102865088..102865107,+!p1@Hoxc4!0.76!6.53!Hoxc4;;chr18:84255771..84255795,-!p3@Tshz1!0.75!15.33!Tshz1;;chrX:45245644..45245666,-!p2@Smarca1!0.74!15.76!Smarca1;;chr16:43363152..43363186,+!p3@Zbtb20!0.74!11.21!Zbtb20;;chr6:15135456..15135520,+!p3@Foxp2!0.74!10.50!Foxp2;;chr2:74542918..74542971,+!p1@Hoxd8!0.74!7.10!Hoxd8;;chr1:138846168..138846176,-!p14@Nr5a2!0.74!4.54!Nr5a2;;chr10:30375579..30375616,-!p3@Ncoa7!0.73!11.07!Ncoa7;;chr6:52184901..52184959,-!p2@Hoxa10!0.73!4.40!Hoxa10;;chr15:102865131..102865151,+!p2@Hoxc4!0.72!4.97!Hoxc4;;chr15:102820964..102821006,+!p1@Hoxc8!0.72!4.26!Hoxc8;;chr2:74549945..74549965,+!p4@Hoxd3!0.72!4.26!Hoxd3;;chr6:52195795..52195825,-!p1@Hoxa11!0.72!4.26!Hoxa11;;chr6:144730427..144730508,-!p1@Sox5!0.71!28.53!Sox5;;chr18:11052485..11052508,+!p2@Gata6!0.71!12.63!Gata6;;chr7:20162663..20162678,+!p1@Zfp296!0.71!5.68!Zfp296;;chr10:88996336..88996380,-!p2@Nr1h4!0.71!5.25!Nr1h4;;chr6:52195763..52195792,-!p2@Hoxa11!0.71!4.12!Hoxa11;;chr6:15135215..15135244,+!p11@Foxp2!0.71!4.12!Foxp2;;chr15:35225873..35225889,+!p2@Osr2!0.71!4.12!Osr2;;chr3:52072315..52072327,+!p2@Foxo1!0.70!28.25!Foxo1;;chr2:152758901..152758925,-!p1@Foxs1!0.70!19.87!Foxs1;;chr5:135582751..135582788,+!p1@Mlxipl!0.70!18.03!Mlxipl;;chr19:59533163..59533185,+!p3@Emx2!0.70!3.97!Emx2;;chr10:5734677..5734702,-!p4@Esr1!0.70!3.97!Esr1;;chr18:11052642..11052659,+!p1@Gata6!0.69!22.28!Gata6;;chr18:11052456..11052477,+!p3@Gata6!0.69!13.34!Gata6;;chr4:122673187..122673201,+!p2@Mycl1!0.69!7.52!Mycl1;;chr15:40486566..40486600,+!p1@Zfpm2!0.68!25.55!Zfpm2;;chr16:42907554..42907591,+!p5@Zbtb20!0.68!10.65!Zbtb20;;chr2:65683890..65683907,+!p1@Csrnp3!0.68!7.81!Csrnp3;;chr2:105003277..105003280,+!p5@Wt1!0.68!3.83!Wt1;;chr4:89354729..89354776,+!p1@Dmrta1!0.68!3.83!Dmrta1;;chr11:85646263..85646278,+!p2@Tbx2!0.67!10.50!Tbx2;;chr4:84321300..84321315,-!p2@Bnc2!0.67!4.68!Bnc2;;chr2:74529998..74530020,+!p2@Hoxd10!0.67!3.69!Hoxd10;;chr2:74549915..74549930,+!p6@Hoxd3!0.67!3.69!Hoxd3;;chr15:102839948..102839975,+!p3@Hoxc6!0.67!3.69!Hoxc6;;chr15:102821007..102821021,+!p2@Hoxc8!0.67!3.69!Hoxc8;;chr11:96690797..96690813,-!p1@Nfe2l1!0.66!79.63!Nfe2l1;;chr10:67000609..67000625,+!p1@Egr2!0.66!9.23!Egr2;;chr10:88996274..88996286,-!p4@Nr1h4!0.66!3.55!Nr1h4;;chr14:63890491..63890516,-!p2@Gata4!0.66!3.55!Gata4;;chr12:34642682..34642753,+!p2@Twist1!0.65!10.22!Twist1;;chr10:75495410..75495444,+!p2@Zfp280b!0.65!9.79!Zfp280b;;chr3:90046995..90047031,-!p2@Creb3l4!0.65!4.54!Creb3l4;;chr15:102865048..102865073,+!p3@Hoxc4!0.65!4.54!Hoxc4;;chr14:22807107..22807119,-!p2@Zfp503!0.64!17.17!Zfp503;;chr5:125538737..125538781,-!p2@Ncor2!0.64!13.91!Ncor2;;chr2:74550178..74550214,+!p5@Hoxd3!0.64!3.83!Hoxd3;;chr9:36954842..36954908,-!p1@Pknox2!0.63!44.71!Pknox2;;chr5:38215819..38215823,-!p1@Msx1!0.63!9.65!Msx1;;chr9:31720843..31720888,-!p1@Barx2!0.63!3.69!Barx2;;chr10:5734660..5734670,-!p7@Esr1!0.63!3.26!Esr1;;chr17:37139472..37139514,+!p1@Zfp57!0.62!25.55!Zfp57;;chr5:120121020..120121049,+!p1@Tbx3!0.62!22.71!Tbx3;;chr14:76888344..76888348,+!p26@Tsc22d1!0.62!3.12!Tsc22d1;;chr18:84255841..84255883,-!p1@Tshz1!0.61!25.83!Tshz1;;chr7:77511403..77511450,-!p3@Nr2f2!0.61!7.38!Nr2f2;;chr18:83079981..83080037,+!p6@Zfp516!0.61!5.96!Zfp516;;chr14:22807216..22807231,-!p3@Zfp503!0.61!5.68!Zfp503;;chr17:71199121..71199165,-!p2@Tgif1!0.60!25.98!Tgif1;;chr7:77511311..77511352,-!p4@Nr2f2!0.60!6.81!Nr2f2;;chr6:115372058..115372085,+!p3@Pparg!0.60!2.98!Pparg;;chr10:5636336..5636347,-!p9@Esr1!0.60!2.98!Esr1;;chr2:74543397..74543435,+!p2@Hoxd8!0.60!2.98!Hoxd8;;chr19:59533429..59533470,+!p4@Emx2!0.60!2.98!Emx2;;chr4:122911086..122911112,+!p1@Heyl!0.59!40.88!Heyl;;chr15:101097270..101097290,+!p1@Nr4a1!0.59!36.19!Nr4a1;;chr6:88148650..88148669,+!p1@Gata2!0.59!29.38!Gata2;;chr8:94325321..94325366,-!p1@Irx3!0.59!8.09!Irx3;;chr14:76904313..76904328,+!p1@Tsc22d1!0.58!666.27!Tsc22d1;;chr17:71200529..71200556,-!p1@Tgif1!0.58!55.50!Tgif1;;chr4:97444012..97444045,+!p4@Nfia!0.58!25.98!Nfia;;chr5:120121446..120121461,+!p2@Tbx3!0.58!10.93!Tbx3;;chr10:30562571..30562597,-!p1@Hey2!0.58!7.52!Hey2;;chr2:163028888..163028905,+!p3@Tox2!0.58!3.55!Tox2;;chr2:104966465..104966479,+!p6@Wt1!0.58!2.84!Wt1;;chr6:115372099..115372121,+!p5@Pparg!0.58!2.84!Pparg;;chr16:43508231..43508271,+!p21@Zbtb20!0.58!2.84!Zbtb20;;chr1:170362273..170362317,-!p1@Pbx1!0.57!95.53!Pbx1;;chr14:18493386..18493464,+!p1@Thrb!0.57!12.49!Thrb;;chr16:42907656..42907675,+!p10@Zbtb20!0.57!6.67!Zbtb20;;chr9:96653241..96653288,-!p1@E030011O05Rik,p5@Zbtb38!0.57!5.68!Zbtb38;;chr6:88143711..88143717,+!p2@Gata2!0.57!4.83!Gata2;;chr17:14011485..14011507,+!p2@Mllt4!0.57!2.70!Mllt4;;chr6:97757008..97757061,+!p1@Mitf!0.55!13.20!Mitf;;chr8:59799772..59799789,+!p1@Hand2!0.55!8.66!Hand2;;chr2:74535796..74535808,+!p3@Hoxd9!0.55!2.55!Hoxd9;;chr2:74517742..74517758,+!p2@Hoxd11!0.55!2.55!Hoxd11;;chr11:100721640..100721658,+!p2@Stat5a!0.55!2.55!Stat5a;;chr12:75002389..75002406,+!p4@Hif1a!0.55!2.55!Hif1a;;chr1:38684260..38684312,-!p2@Aff3!0.54!21.72!Aff3;;chr6:133985993..133986029,+!p2@Etv6!0.54!20.01!Etv6;;chr5:104121391..104121450,+!p3@Aff1!0.54!15.90!Aff1;;chr17:56970339..56970428,-!p1@Rfx2!0.54!9.23!Rfx2;;chr10:126778916..126778974,-!p1@Gli1!0.54!6.53!Gli1;;chr2:152758938..152758954,-!p2@Foxs1!0.54!3.69!Foxs1;;chr1:170362242..170362256,-!p3@Pbx1!0.53!21.57!Pbx1;;chr19:28754692..28754757,-!p1@Glis3!0.53!12.35!Glis3;;chr18:64499674..64499696,+!p1@Onecut2!0.53!4.68!Onecut2;;chr8:94325486..94325510,-!p4@Irx3!0.53!3.41!Irx3;;chr9:31721051..31721068,-!p3@Barx2!0.53!2.41!Barx2;;chr9:8900490..8900502,+!p4@Pgr!0.53!2.41!Pgr;;chr1:138846156..138846161,-!p13@Nr5a2!0.53!2.41!Nr5a2;;chr2:104966436..104966455,+!p7@Wt1!0.53!2.41!Wt1;;chr10:5734582..5734595,-!p10@Esr1!0.53!2.41!Esr1;;chr2:169458192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Zbtb8a!0.22!7.95!Zbtb8a;;chr9:21420572..21420591,+!p2@Smarca4!0.22!7.52!Smarca4;;chr18:55147667..55147746,-!p2@Zfp608!0.22!6.25!Zfp608;;chr18:69504195..69504213,+!p4@Tcf4!0.22!6.10!Tcf4;;chr12:37835141..37835194,+!p1@Meox2!0.22!3.83!Meox2;;chr3:9610074..9610086,-!p2@Zfp704!0.22!2.84!Zfp704;;chr4:118846454..118846506,-!p2@Zfp691!0.22!2.70!Zfp691;;chr3:54559463..54559493,+!p3@Smad9!0.22!1.99!Smad9;;chr2:92886587..92886622,-!p3@Prdm11!0.22!1.42!Prdm11;;chr11:96180045..96180059,+!p1@Hoxb4!0.22!1.28!Hoxb4;;chr7:19895384..19895399,-!p2@Fosb!0.22!1.28!Fosb;;chr9:68501549..68501564,+!p6@Rora!0.22!1.14!Rora;;chr10:88145766..88145770,-!p1@Spic!0.22!1.14!Spic;;chr1:165243272..165243283,-!p6@Prrx1!0.22!0.99!Prrx1;;chrX:45245582..45245591,-!p4@Smarca1!0.22!0.99!Smarca1;;chr10:20032267..20032298,+!p1@Bclaf1!0.21!73.81!Bclaf1;;chr3:30993974..30994045,+!p1@Skil!0.21!40.31!Skil;;chr6:90319480..90319651,+!p1@Zxdc!0.21!37.61!Zxdc;;chr14:99697871..99697934,+!p1@Klf5!0.21!28.53!Klf5;;chr11:100711801..100711910,-!p1@Stat5b!0.21!19.87!Stat5b;;chr4:118846783..118846826,-!p1@Zfp691!0.21!19.30!Zfp691;;chr6:53523358..53523388,+!p1@Creb5!0.21!16.89!Creb5;;chr4:87679232..87679277,-!p1@Mllt3!0.21!16.61!Mllt3;;chr3:14578609..14578687,+!p1@E2f5!0.21!13.34!E2f5;;chr9:122832168..122832210,+!p1@Zfp105!0.21!10.65!Zfp105;;chr13:112476511..112476554,+!p1@Mier3!0.21!10.50!Mier3;;chr19:26679615..26679646,+!p3@Smarca2!0.21!9.37!Smarca2;;chr5:104183219..104183236,+!p2@Aff1!0.21!9.23!Aff1;;chr8:107694661..107694713,+!p2@Cbfb!0.21!9.08!Cbfb;;chr6:124959683..124959735,+!p2@Zfp384!0.21!7.95!Zfp384;;chr4:61869460..61869521,-!p1@Zfp37!0.21!7.10!Zfp37;;chr11:50729638..50729681,-!p1@Zfp2!0.21!6.81!Zfp2;;chr16:3847206..3847307,+!p1@Zfp174!0.21!6.39!Zfp174;;chr6:90412582..90412601,+!p1@Klf15!0.21!6.25!Klf15;;chr10:114821572..114821618,-!p3@Thap2!0.21!5.54!Thap2;;chr13:67461490..67461531,-!p1@Zfp595,p1@Zfp953!0.21!5.25!Zfp953;;chr9:48644306..48644364,-!p1@Zbtb16!0.21!5.11!Zbtb16;;chr4:128483680..128483715,-!p3@Zfp362!0.21!4.68!Zfp362;;chr2:83499707..83499708,+!p6@Zc3h15!0.21!4.40!Zc3h15;;chr6:134780234..134780288,+!p1@Crebl2!0.21!3.97!Crebl2;;chr12:119539732..119539762,-!p3@Sp4!0.21!2.55!Sp4;;chr5:120121169..120121171,+!p4@Tbx3!0.21!1.85!Tbx3;;chr15:61818593..61818614,+!p4@Myc!0.21!1.70!Myc;;chr3:5218590..5218614,+!p3@Zfhx4!0.21!1.70!Zfhx4;;chr4:135129538..135129558,-!p1@Grhl3!0.21!1.42!Grhl3;;chr2:30700788..30700824,+!p2@Prrx2!0.21!1.42!Prrx2;;chr11:18918406..18918431,-!p6@Meis1!0.21!1.14!Meis1;;chr10:126779021..126779032,-!p2@Gli1!0.21!0.99!Gli1;;chr1:133903955..133903969,+!p10@Elk4!0.21!0.99!Elk4;;chr7:52960700..52960719,+!p2@Dbp!0.21!0.99!Dbp;;chr5:53981912..53981942,+!p1@Rbpj!0.20!27.25!Rbpj;;chr5:76733756..76733815,-!p1@Clock!0.20!21.86!Clock;;chr11:83943084..83943122,-!p1@Tada2a!0.20!21.15!Tada2a;;chr2:181327438..181327495,-!p1@Znf512b!0.20!18.59!Znf512b;;chr17:21625946..21626024,+!p1@Zfp53!0.20!15.05!Zfp53;;chr11:87881569..87881633,+!p2@Vezf1!0.20!10.50!Vezf1;;chr5:145992626..145992652,+!p2@Zfp655!0.20!9.23!Zfp655;;chr11:23670953..23671028,-!p1@Rel!0.20!7.52!Rel;;chr13:21454695..21454752,+!p1@Zscan12!0.20!7.52!Zscan12;;chr1:193007123..193007139,-!p1@Atf3!0.20!7.38!Atf3;;chr1:39250584..39250643,+!p1@Npas2!0.20!6.53!Npas2;;chr8:87225329..87225396,+!p1@Lyl1!0.20!4.68!Lyl1;;chr15:99532528..99532550,+!p3@Smarcd1!0.20!4.40!Smarcd1;;chr3:88753953..88754004,+!p1@Ash1l!0.20!3.97!Ash1l;;chr2:166888058..166888105,-!p2@Znfx1!0.20!3.83!Znfx1;;chr18:83080305..83080335,+!p2@Zfp516!0.20!3.69!Zfp516;;chr6:145814003..145814056,-!p1@Bhlhe41!0.20!3.41!Bhlhe41;;chr1:133904901..133904934,+!p3@Elk4!0.20!3.41!Elk4;;chr2:181100223..181100237,+!p4@Zgpat!0.20!3.12!Zgpat;;chr18:84255649..84255661,-!p4@Tshz1!0.20!2.98!Tshz1;;chrX:92906980..92907024,+!p2@Zc3h12b!0.20!2.84!Zc3h12b;;chr2:128793085..128793116,+!p2@Zc3h6!0.20!2.70!Zc3h6;;chr7:30954700..30954715,-!p2@LOC677248,p2@Zfp146!0.20!2.55!Zfp146;;chr13:96095124..96095144,+!p3@Zbed3!0.20!1.99!Zbed3;;chr2:115891381..115891392,-!p5@Meis2!0.20!1.99!Meis2;;chr6:39068163..39068176,-!p2@Parp12!0.20!1.85!Parp12;;chr7:148513637..148513648,-!p6@Deaf1!0.20!1.70!Deaf1;;chr11:106993257..106993268,-!p4@Bptf!0.20!1.70!Bptf;;chr8:87237732..87237745,-!p7@Nfix!0.20!1.42!Nfix;;chr5:92391948..92391968,+!p3@Thap6!0.20!1.42!Thap6;;chr5:144951153..144951203,+!p1@Bhlha15!0.20!1.28!Bhlha15;;chr5:130175978..130175990,-!p2@Zfp11!0.20!1.28!Zfp11;;chr5:92391466..92391471,+!p2@Thap6!0.20!1.28!Thap6;;chr11:16952347..16952366,-!p2@Plek!0.20!1.28!Plek;;chr17:87153505..87153516,+!p6@Epas1!0.20!1.14!Epas1;;chr12:78063032..78063043,-!p4@Max!0.20!1.14!Max;;chr1:38684383..38684394,-!p4@Aff3!0.20!1.14!Aff3;;chr2:30700857..30700873,+!p3@Prrx2!0.20!1.14!Prrx2;;chr1:33871240..33871251,-!p5@Zfp451!0.20!0.99!Zfp451;;chr18:3281725..3281740,-!p3@Crem!0.20!0.99!Crem;;chr17:21626041..21626052,+!p3@Zfp53!0.20!0.99!Zfp53;;chr16:43510301..43510313,+!p24@Zbtb20!0.20!0.85!Zbtb20;;chr15:85566051..85566080,+!p4@Ppara!0.20!0.85!Ppara;;chr8:73905892..73905903,-!p5@Nr2f6!0.20!0.85!Nr2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@@ Line 41: / Line 44: @@
 |is_a=EFO:0002091;;FF:0011439
 |is_obsolete=
+|library_id=CNhs10507
+|library_id_phase_based=2:CNhs10507
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/mouse#cage;sample;91
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/mouse#cage;sample;91
+|mm10bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/ovary%252c%2520adult.CNhs10507.91-2I7.mm10.nobarcode.bam
+|mm10ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/ovary%252c%2520adult.CNhs10507.91-2I7.mm10.nobarcode.ctss.bed.gz
+|mm9bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/ovary%252c%2520adult.CNhs10507.91-2I7.mm9.nobarcode.bam
+|mm9ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/ovary%252c%2520adult.CNhs10507.91-2I7.mm9.ctss.bed.gz
+|mm9fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/ovary%252c%2520adult.CNhs10507.91-2I7.mm9.nobarcode.rdna.fa.gz
 |name=ovary, adult
 |namespace=FANTOM5
@@ Line 46: / Line 60: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs10507,LSID648,release008,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
 |repeat_enrich_byfamily=-0.040763206271969,0,0,0,0,0.0288216590713588,0.0564477004213219,0,0.0211554027527605,0,0,0.0697255397402798,0,0,0,0,0,0,0.0756633230750858,0,0,0,0,0,0.0576433181427177,0,0,0,0,0,0,0,0.173982439272863,0,0,0,0,0,0.0236649722358065,0,-0.330763023252857,-0.451077438825721,-0.0745889639787309,0,0,0,0.0576433181427177,0,0,0,0,0,0,0.329503781752069,0.732405231596895,-0.00836222942072263,0,0,0,0,0.0123600795416059,0,0.0288216590713588,0,0,0.0123048820144067,0.0533154214963378,-0.0110168593327631,-0.00402626263426115,0.0557435649129085,0.108524491213051,0.0552322084236453,0.0205030010488674,0.0576433181427177,0,0,0.0352551634337072,0.0833852969438899,-0.120656222145482,0.0296928963731435,0,0,0,0,0,0,-0.138122964550036,-0.528528125362039,-0.0745233281997789,0,0,0,0,0
@@ Line 62: / Line 76: @@
 |rna_weight_ug=
 |sample_age=
+|sample_category=developmental
 |sample_cell_catalog=
 |sample_cell_line=
@@ Line 82: / Line 97: @@
 |top_motifs=FOXO1,3,4:1.69223308882;ATF6:1.63418079615;TLX1..3_NFIC{dimer}:1.38947279382;FOXQ1:1.29797428349;FOXN1:1.23568388099;SP1:1.22325156766;RFX2..5_RFXANK_RFXAP:1.18409700364;TEF:1.12552009954;TFAP2{A,C}:1.06683162272;NFATC1..3:1.0392268201;MYBL2:0.994271702441;SRF:0.969081511832;GFI1B:0.968452232309;AR:0.890472220855;XCPE1{core}:0.853228825305;SPZ1:0.852771620257;GLI1..3:0.834889142218;HAND1,2:0.821369160835;IKZF1:0.812634841799;GTF2A1,2:0.785577303487;GTF2I:0.770393332171;BACH2:0.741440884564;TFAP4:0.706033560037;TEAD1:0.704391216565;TFCP2:0.696034491953;NFE2:0.688407261529;NR5A1,2:0.652815624816;IRF1,2:0.650110469713;STAT2,4,6:0.604920070949;GCM1,2:0.604814511867;RFX1:0.604076927481;IRF7:0.589199745966;GZF1:0.58493419905;SREBF1,2:0.574956131906;MYFfamily:0.556585331187;ZNF238:0.553026555808;PATZ1:0.551279112918;CRX:0.538154242058;NFIL3:0.526079476788;TOPORS:0.522096459154;MZF1:0.517354029042;EP300:0.486965403469;FOX{D1,D2}:0.485667766484;HBP1_HMGB_SSRP1_UBTF:0.483892310785;EGR1..3:0.470762088895;BPTF:0.468095447884;bHLH_family:0.437767457261;FOS_FOS{B,L1}_JUN{B,D}:0.40380199223;HLF:0.402298447922;MAZ:0.398201102497;NFE2L1:0.395381701207;STAT1,3:0.39130614318;MAFB:0.389842917755;RXR{A,B,G}:0.379235320519;HOX{A5,B5}:0.372530452905;ESRRA:0.357387664428;RBPJ:0.356613086917;HIC1:0.353204505991;TBP:0.329072312166;RUNX1..3:0.318100395831;SPIB:0.311277067033;PAX5:0.308553452164;ESR1:0.302328100262;ATF2:0.280676998767;GFI1:0.269067926106;DMAP1_NCOR{1,2}_SMARC:0.265570386518;NR1H4:0.249623041653;LEF1_TCF7_TCF7L1,2:0.236883136876;SOX2:0.228539010429;SOX5:0.221148460736;MTE{core}:0.218192738061;GATA4:0.213243086107;NFE2L2:0.205715610732;ZIC1..3:0.18204974774;HIF1A:0.175664061408;NKX2-3_NKX2-5:0.169444215266;SMAD1..7,9:0.164180075528;ETS1,2:0.153582460972;ZNF148:0.140939745358;POU2F1..3:0.116708283944;T:0.103459097589;ZNF143:0.0935915409228;TFAP2B:0.0778666250986;RREB1:0.0643912891239;MED-1{core}:0.054853864772;NHLH1,2:0.0414011684145;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.0342865123215;PPARG:0.0312679295663;NFIX:0.0161319518109;ATF4:-0.00032960378557;SNAI1..3:-0.0053454022798;ZNF423:-0.0140443858234;PBX1:-0.0154404089405;NANOG:-0.0156716223082;ZNF384:-0.0179905265062;MTF1:-0.0432239627384;ELF1,2,4:-0.0480830375186;STAT5{A,B}:-0.0486230775514;NFKB1_REL_RELA:-0.0639135754385;DBP:-0.0720964560206;PRDM1:-0.0776469620621;BREu{core}:-0.0882968689923;POU5F1:-0.097834005221;PRRX1,2:-0.103024427704;NANOG{mouse}:-0.106170797074;CDC5L:-0.114122186149;PITX1..3:-0.117821001146;REST:-0.140677596858;NR6A1:-0.149191251766;TBX4,5:-0.149493629787;MEF2{A,B,C,D}:-0.157602977792;POU1F1:-0.168619858629;HSF1,2:-0.168997334324;SPI1:-0.186179356243;FOXP1:-0.189895533787;CEBPA,B_DDIT3:-0.192041695836;HMX1:-0.196903728478;HOX{A4,D4}:-0.215940313692;NR3C1:-0.218960810882;ZFP161:-0.226929023767;LHX3,4:-0.227877587946;GATA6:-0.23244860678;TP53:-0.232549260062;ELK1,4_GABP{A,B1}:-0.256470475044;NKX2-2,8:-0.266812030499;VSX1,2:-0.29125604684;MYB:-0.292175104236;FOXA2:-0.304221765563;HNF4A_NR2F1,2:-0.30772039575;CREB1:-0.309614112795;AHR_ARNT_ARNT2:-0.313870980313;MYOD1:-0.315254201903;PDX1:-0.320421108248;NFY{A,B,C}:-0.329159530256;NRF1:-0.329482203324;ZEB1:-0.336454575133;FOSL2:-0.341291684086;TGIF1:-0.379981052831;TFDP1:-0.385728687774;EBF1:-0.400608419668;ARID5B:-0.406526363473;IKZF2:-0.42943577221;HNF1A:-0.431823486809;FOX{F1,F2,J1}:-0.444789252491;TLX2:-0.455064115125;FOX{I1,J2}:-0.455931120472;ZBTB16:-0.456411815104;SOX{8,9,10}:-0.459439480096;ZBTB6:-0.467430828836;RORA:-0.468759749364;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.477805031644;PAX4:-0.519437795697;RXRA_VDR{dimer}:-0.522272309526;E2F1..5:-0.527545150688;FOXD3:-0.575137732645;FOXL1:-0.57836392637;NKX3-2:-0.589498669612;ADNP_IRX_SIX_ZHX:-0.594081553209;ALX4:-0.615367684803;JUN:-0.625048316296;CUX2:-0.654470968152;LMO2:-0.684790477767;POU6F1:-0.704907335363;FOXP3:-0.717129686722;FOXM1:-0.720456902791;HMGA1,2:-0.790814531986;NKX3-1:-0.7946899265;AIRE:-0.802511153645;SOX17:-0.819961005109;EN1,2:-0.820323052901;KLF4:-0.826076513616;UFEwm:-0.876953080112;ATF5_CREB3:-0.908568569831;POU3F1..4:-0.943882890842;YY1:-0.981742751618;NKX2-1,4:-1.04617055537;OCT4_SOX2{dimer}:-1.06107039764;ONECUT1,2:-1.07787464199;CDX1,2,4:-1.08732199296;ALX1:-1.13915695325;NKX6-1,2:-1.15818694465;TAL1_TCF{3,4,12}:-1.15911086515;PAX1,9:-1.21034679388;EVI1:-1.21880339002;PAX6:-1.30609432977;HES1:-1.34217324996;PAX2:-1.50458001042;HOXA9_MEIS1:-2.00031647155;PAX8:-2.06048274147
 |xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_mouse;search_select_hide=table111:91-2I7;search_select_hide=table117:91-2I7
 }}

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FF:91-2I7: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 19:21, 4 June 2020

CNhs10507

	FAQ
	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0