Personal tools

FFCP PHASE1:Mm9::chr15:99288189..99288208,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=380969
|EntrezGene=380969
|HGNC=
|HGNC=
|MCL_coexpression_id=398
|MCL_coexpression_id=398
|TSSclassifier=NA
|UniProt=Q6GQX2
|UniProt=Q6GQX2
|association_with_transcript=-10bp_to_ENSMUST00000023747,NM_001001884,uc007xpn.1_5end
|association_with_transcript=-10bp_to_ENSMUST00000023747,NM_001001884,uc007xpn.1_5end
|cluster_id=chr15:99288189..99288208,-
|description=CAGE_peak_2_at_Nckap5l_5end
|description=CAGE_peak_2_at_Nckap5l_5end
|id=chr15:99288189..99288208,-
|id=chr15:99288189..99288208,-
|ontology_enrichment_celltype=CL:0000117!1.19e-07!23;CL:0000337!1.19e-07!23
|ontology_enrichment_celltype=CL:0000117!1.19e-07!23;CL:0000337!1.19e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.24e-07,23;CL:0000337,1.24e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!2.28e-18!52;UBERON:0005068!2.28e-18!52;UBERON:0006241!2.28e-18!52;UBERON:0007135!2.28e-18!52;UBERON:0002346!2.61e-18!71;UBERON:0003075!2.61e-18!71;UBERON:0007284!2.61e-18!71;UBERON:0001017!9.51e-18!73;UBERON:0005743!9.51e-18!73;UBERON:0000073!4.68e-17!75;UBERON:0001016!4.68e-17!75;UBERON:0004121!1.04e-16!102;UBERON:0000924!1.04e-16!102;UBERON:0006601!1.04e-16!102;UBERON:0000955!5.62e-15!50;UBERON:0006238!5.62e-15!50;UBERON:0002616!5.79e-15!49;UBERON:0000033!3.00e-14!63;UBERON:0000153!4.91e-14!94;UBERON:0003056!5.30e-14!49;UBERON:0003080!4.96e-13!40;UBERON:0007811!5.89e-13!86;UBERON:0002780!1.45e-12!39;UBERON:0001890!1.45e-12!39;UBERON:0006240!1.45e-12!39;UBERON:0002020!2.14e-12!34;UBERON:0002791!4.99e-10!29;UBERON:0003528!4.99e-10!29;UBERON:0001893!4.99e-10!29;UBERON:0000025!1.84e-09!114;UBERON:0000956!2.29e-08!21;UBERON:0001869!2.29e-08!21;UBERON:0000203!2.29e-08!21;UBERON:0004111!2.36e-07!122
|ontology_enrichment_uberon=UBERON:0001049!2.28e-18!52;UBERON:0005068!2.28e-18!52;UBERON:0006241!2.28e-18!52;UBERON:0007135!2.28e-18!52;UBERON:0002346!2.61e-18!71;UBERON:0003075!2.61e-18!71;UBERON:0007284!2.61e-18!71;UBERON:0001017!9.51e-18!73;UBERON:0005743!9.51e-18!73;UBERON:0000073!4.68e-17!75;UBERON:0001016!4.68e-17!75;UBERON:0004121!1.04e-16!102;UBERON:0000924!1.04e-16!102;UBERON:0006601!1.04e-16!102;UBERON:0000955!5.62e-15!50;UBERON:0006238!5.62e-15!50;UBERON:0002616!5.79e-15!49;UBERON:0000033!3.00e-14!63;UBERON:0000153!4.91e-14!94;UBERON:0003056!5.30e-14!49;UBERON:0003080!4.96e-13!40;UBERON:0007811!5.89e-13!86;UBERON:0002780!1.45e-12!39;UBERON:0001890!1.45e-12!39;UBERON:0006240!1.45e-12!39;UBERON:0002020!2.14e-12!34;UBERON:0002791!4.99e-10!29;UBERON:0003528!4.99e-10!29;UBERON:0001893!4.99e-10!29;UBERON:0000025!1.84e-09!114;UBERON:0000956!2.29e-08!21;UBERON:0001869!2.29e-08!21;UBERON:0000203!2.29e-08!21;UBERON:0004111!2.36e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.91e-18,52;UBERON:0005068,1.91e-18,52;UBERON:0006241,1.91e-18,52;UBERON:0007135,1.91e-18,52;UBERON:0002346,6.87e-18,64;UBERON:0003075,6.87e-18,64;UBERON:0007284,6.87e-18,64;UBERON:0000073,1.55e-17,54;UBERON:0001017,4.37e-17,73;UBERON:0001016,3.14e-16,75;UBERON:0010371,4.42e-16,73;UBERON:0010314,1.80e-15,92;UBERON:0004121,2.68e-15,95;UBERON:0000924,2.68e-15,95;UBERON:0006601,2.68e-15,95;UBERON:0000955,4.10e-15,47;UBERON:0006238,4.10e-15,47;UBERON:0002616,4.19e-15,46;UBERON:0003056,5.18e-14,49;UBERON:0003080,4.10e-13,40;UBERON:0002780,1.28e-12,39;UBERON:0001890,1.28e-12,39;UBERON:0006240,1.28e-12,39;UBERON:0002020,2.12e-12,34;UBERON:0003528,6.74e-10,29;UBERON:0002791,6.74e-10,29;UBERON:0001893,6.74e-10,29;UBERON:0000025,3.72e-09,114;UBERON:0000956,3.12e-08,21;UBERON:0001869,3.12e-08,21;UBERON:0000203,3.12e-08,21;UBERON:0004111,2.72e-07,122
|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0,1.93684985162364,0.281577444303333,1.17032263160997,1.71217968225505,1.11681022593471,1.88320802924326,2.09808965805594,0.333109761815663,0,0.699561878128147,1.10411757875383,0.685572168028694,0,1.27564935226605,1.29078236561151,0.522399578277871,0,0,0,0,0,0,0,0.221730510655305,1.27006134691926,0.61506478758457,0,0,0,0,0.418531630736908,0,0,0,0,0,0.881277725829041,1.31790010585369,1.28482726513177,3.12956537739216,0.872100625521786,1.31811709640683,0.777719596297134,0.55994568650145,1.43752564364972,0.167782606057736,1.45072428402269,2.01656279485478,0.514518872071894,1.43266719969378,0,5.66486090406874,6.34789175126439,2.53532561402472,1.0165335962074,0,1.3498495759221,0,0.7104801149461,1.19840044207362,4.2264013585371,4.14758449233911,3.64516033495565,4.41682418837902,1.99955689082663,2.87129103237098,3.55223317723367,3.45043695665651,0.919218786610021,1.10115880999389,2.29837208553338,1.22885226604995,4.61602007055678,6.49562269577109,7.29278718779464,1.3959149950069,0.56276261003168,1.06958773443767,4.12480019663135,3.70166370077668,4.84638559145781,0.681535739998656,1.13357340160178,2.02905142091174,0,0,0,0,0,0.140444420131752,0.681721290312231,0,1.06001872353102,1.54927761754349,0,0,0,0,0,0,0.11418387971906,0.517875767294343,1.7813056687779,0.867426633830679,2.13125834818499,1.38369298353635,1.3565037649736,1.88141931417128,1.38233250462643,1.23597483867187,0.433798070759735,0.884610551949874,1.7794353494215,1.10420759230197,1.93950101254089,0,3.80615036115011,3.77004072264219,0.510914110417183,0.11981512450592,0,0.508280908292259,3.14560342750128,2.74500361691176,5.02617408451458,2.78118912307642,2.30143911597297,2.70124457927428,3.89379031362618,2.03678727700633,0.870848794270651,0.505445516867349,0.631325567659422,1.56144531555244,2.06911893990126,1.62055916824814,1.9591626318643,2.04109497453984,2.0498195245576,1.96773621575431,2.58703370739016,1.94011193639558,2.64748512234947,2.63926686245923,1.7535658594206,1.66828349535359,2.78601733217733,1.02891068203972,1.79130840136644,0,0.51469581422943,0.568326998791185,1.65700618028402,1.40715635988658,0.720248245844059,2.13070262026689,2.36117078096885,2.00547246753592,1.86027155800326,3.48755421819505,1.63471479314037,1.31647879930784,1.14917224855367,0.972825714550269,1.46199987425332,0.878200461164203,1.61047702512446,2.94405927989778,4.93942139420565,0,0,2.34617075588757,2.32236671860439,1.80414445850931,1.21010114774006,0.22237804384487,0.190225626112559,0.949058123089023,0.988193728344065,0.251335208800269,0.994782360205754,0.58489226135736,0.898819408654221,0.864552199498777,0.398282546508734,3.41402221715547,1.25673363870702,4.50830942692322,2.24016460629846,0.775809948670503,1.19230893813542,0.885311519739602,0.442830443938806,0.941992367048249,0.246794327843601,0,1.16791574001266,0.982794975566015,0.224862112384854,1.01430060694251,0,0.50925170356284,0.287696137450811,0.972811360650212,0.549122826376163,1.43768206527355,0.744281895337007,0,0.252578877947112,0.179397413521912,0,0.923765950833023,2.08440552947533,1.46668478797823,1.52770577197669,1.64283173801951,1.50755631697634,3.57065461329021,2.53673742215138,1.89162172927429,3.76489972402917,3.50800491046472,2.94953966488328,2.07221978239075,2.16973587872267,0,0,0.983528546038072,1.10374698521893,3.85321415970701,3.16471553798949,0.491804836130026,1.00988370881749,1.57754109708128,0.780877488593277,0.861693590931196,0.716906393857656,2.45078541490634,2.26461224631066,0.404810701674894,0.292255857911312,2.37172666767914,1.60660658210904,1.56134093729095,1.06839362200353,1.79175655288934,1.81467135269789,0,1.21390318077491,0.604647113929502,0.565815239267694,0.590603785761546,1.22974059177571,1.55056975900933,0.363533729477506,0.712994756769443,0.316036757935816,0,0,2.04263763452273,1.44048875225048,1.55230420539305,2.14337035031592,3.90148514013002,2.31879462882692,1.31639216481697,3.65357938937519,0.469343416127421,1.69465656691056,0,0.8244312647074,1.77610869365496,1.26657142349127,1.43246812803764,1.80554989719567,0.291480836629851,4.07935664423121,0.170870880797853,1.857481811669,1.11116716421827,0.188368457004691,0,0.457556346413045,0.169978429993855,0.559805809294632,1.10559979043539,0,2.21435195506795,1.82987520414164,1.51207477150522,1.46361807210128,0.655087691238533,0.539457385539283,0.991841468704031,0.26175594198403,0.518459893167171,0,0.56369293868419,1.49516546043979,1.48912641411388,1.36115831840833,1.54991788173277,2.02747350588934,1.5256441023948,1.8228613878153,3.14578033277133,2.17425708743405,0.288030006257865,1.58005560314089,1.21635129174099,1.95150818613172,1.29920822977795,0.716106782669926,1.58945083825012,0.600977247599844,2.21534290761866,1.61546319917036,2.13379058634,2.01652370273681,1.75424185331554,2.21287235772758,3.50630706544707,0.226730383615211,1.33191572024439,1.16628013592318,0.503653849092235,0.386379188064381,0.93841237725591,0.73260649706906,0.214368379079066,0.501572104035363,3.95326289831947,3.22227665555024,4.01026859407578,3.60891682921744,3.42541259885321,5.2877572817279,4.05013500139084,3.60256962579376,1.35942722695261,2.07104124700728,2.90604573235695,2.79317411380722,1.87806966329548,1.94485373654635,2.09613162627982,1.83843508450014,1.55572709461131,0.412070114477788,1.28367683836726,1.01078884705519,0.760437899670719,2.07488975524684,2.1537546718073,2.17685518176556,2.1825478203133,2.38146845641537,1.62238056322798,1.92909220463705,1.64834360321323,0.441596760403192,1.02860775715625,1.4198064492747,2.14592570952589,1.74415699958794,1.78807822789128,1.18460451048347,1.46342378298218,0.789209134313529,0.407412341537585,1.12228454331548,1.18635018124174,0.788035859004508,0.818462086339379,1.85924209423159,1.92906610981141,3.99696924700713,1.40358965067245,1.50409737833809,3.06061331310149,2.42650561031467,1.15933917810211
|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0,1.93684985162364,0.281577444303333,1.17032263160997,1.71217968225505,1.11681022593471,1.88320802924326,2.09808965805594,0.333109761815663,0,0.699561878128147,1.10411757875383,0.685572168028694,0,1.27564935226605,1.29078236561151,0.522399578277871,0,0,0,0,0,0,0,0.221730510655305,1.27006134691926,0.61506478758457,0,0,0,0,0.418531630736908,0,0,0,0,0,0.881277725829041,1.31790010585369,1.28482726513177,3.12956537739216,0.872100625521786,1.31811709640683,0.777719596297134,0.55994568650145,1.43752564364972,0.167782606057736,1.45072428402269,2.01656279485478,0.514518872071894,1.43266719969378,0,5.66486090406874,6.34789175126439,2.53532561402472,1.0165335962074,0,1.3498495759221,0,0.7104801149461,1.19840044207362,4.2264013585371,4.14758449233911,3.64516033495565,4.41682418837902,1.99955689082663,2.87129103237098,3.55223317723367,3.45043695665651,0.919218786610021,1.10115880999389,2.29837208553338,1.22885226604995,4.61602007055678,6.49562269577109,7.29278718779464,1.3959149950069,0.56276261003168,1.06958773443767,4.12480019663135,3.70166370077668,4.84638559145781,0.681535739998656,1.13357340160178,2.02905142091174,0,0,0,0,0,0.140444420131752,0.681721290312231,0,1.06001872353102,1.54927761754349,0,0,0,0,0,0,0.11418387971906,0.517875767294343,1.7813056687779,0.867426633830679,2.13125834818499,1.38369298353635,1.3565037649736,1.88141931417128,1.38233250462643,1.23597483867187,0.433798070759735,0.884610551949874,1.7794353494215,1.10420759230197,1.93950101254089,0,3.80615036115011,3.77004072264219,0.510914110417183,0.11981512450592,0,0.508280908292259,3.14560342750128,2.74500361691176,5.02617408451458,2.78118912307642,2.30143911597297,2.70124457927428,3.89379031362618,2.03678727700633,0.870848794270651,0.505445516867349,0.631325567659422,1.56144531555244,2.06911893990126,1.62055916824814,1.9591626318643,2.04109497453984,2.0498195245576,1.96773621575431,2.58703370739016,1.94011193639558,2.64748512234947,2.63926686245923,1.7535658594206,1.66828349535359,2.78601733217733,1.02891068203972,1.79130840136644,0,0.51469581422943,0.568326998791185,1.65700618028402,1.40715635988658,0.720248245844059,2.13070262026689,2.36117078096885,2.00547246753592,1.86027155800326,3.48755421819505,1.63471479314037,1.31647879930784,1.14917224855367,0.972825714550269,1.46199987425332,0.878200461164203,1.61047702512446,2.94405927989778,4.93942139420565,0,0,2.34617075588757,2.32236671860439,1.80414445850931,1.21010114774006,0.22237804384487,0.190225626112559,0.949058123089023,0.988193728344065,0.251335208800269,0.994782360205754,0.58489226135736,0.898819408654221,0.864552199498777,0.398282546508734,3.41402221715547,1.25673363870702,4.50830942692322,2.24016460629846,0.775809948670503,1.19230893813542,0.885311519739602,0.442830443938806,0.941992367048249,0.246794327843601,0,1.16791574001266,0.982794975566015,0.224862112384854,1.01430060694251,0,0.50925170356284,0.287696137450811,0.972811360650212,0.549122826376163,1.43768206527355,0.744281895337007,0,0.252578877947112,0.179397413521912,0,0.923765950833023,2.08440552947533,1.46668478797823,1.52770577197669,1.64283173801951,1.50755631697634,3.57065461329021,2.53673742215138,1.89162172927429,3.76489972402917,3.50800491046472,2.94953966488328,2.07221978239075,2.16973587872267,0,0,0.983528546038072,1.10374698521893,3.85321415970701,3.16471553798949,0.491804836130026,1.00988370881749,1.57754109708128,0.780877488593277,0.861693590931196,0.716906393857656,2.45078541490634,2.26461224631066,0.404810701674894,0.292255857911312,2.37172666767914,1.60660658210904,1.56134093729095,1.06839362200353,1.79175655288934,1.81467135269789,0,1.21390318077491,0.604647113929502,0.565815239267694,0.590603785761546,1.22974059177571,1.55056975900933,0.363533729477506,0.712994756769443,0.316036757935816,0,0,2.04263763452273,1.44048875225048,1.55230420539305,2.14337035031592,3.90148514013002,2.31879462882692,1.31639216481697,3.65357938937519,0.469343416127421,1.69465656691056,0,0.8244312647074,1.77610869365496,1.26657142349127,1.43246812803764,1.80554989719567,0.291480836629851,4.07935664423121,0.170870880797853,1.857481811669,1.11116716421827,0.188368457004691,0,0.457556346413045,0.169978429993855,0.559805809294632,1.10559979043539,0,2.21435195506795,1.82987520414164,1.51207477150522,1.46361807210128,0.655087691238533,0.539457385539283,0.991841468704031,0.26175594198403,0.518459893167171,0,0.56369293868419,1.49516546043979,1.48912641411388,1.36115831840833,1.54991788173277,2.02747350588934,1.5256441023948,1.8228613878153,3.14578033277133,2.17425708743405,0.288030006257865,1.58005560314089,1.21635129174099,1.95150818613172,1.29920822977795,0.716106782669926,1.58945083825012,0.600977247599844,2.21534290761866,1.61546319917036,2.13379058634,2.01652370273681,1.75424185331554,2.21287235772758,3.50630706544707,0.226730383615211,1.33191572024439,1.16628013592318,0.503653849092235,0.386379188064381,0.93841237725591,0.73260649706906,0.214368379079066,0.501572104035363,3.95326289831947,3.22227665555024,4.01026859407578,3.60891682921744,3.42541259885321,5.2877572817279,4.05013500139084,3.60256962579376,1.35942722695261,2.07104124700728,2.90604573235695,2.79317411380722,1.87806966329548,1.94485373654635,2.09613162627982,1.83843508450014,1.55572709461131,0.412070114477788,1.28367683836726,1.01078884705519,0.760437899670719,2.07488975524684,2.1537546718073,2.17685518176556,2.1825478203133,2.38146845641537,1.62238056322798,1.92909220463705,1.64834360321323,0.441596760403192,1.02860775715625,1.4198064492747,2.14592570952589,1.74415699958794,1.78807822789128,1.18460451048347,1.46342378298218,0.789209134313529,0.407412341537585,1.12228454331548,1.18635018124174,0.788035859004508,0.818462086339379,1.85924209423159,1.92906610981141,3.99696924700713,1.40358965067245,1.50409737833809,3.06061331310149,2.42650561031467,1.15933917810211
|short_description=p2@Nckap5l
|short_description=p2@Nckap5l
}}
}}

Latest revision as of 13:55, 1 October 2015

Short description:p2@Nckap5l
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Nckap5l_5end
Coexpression cluster:MCL_coexpression_mm9:398
Association with transcript: -10bp_to_ENSMUST00000023747, NM_001001884, uc007xpn.1_5end
EntrezGene:Nckap5l
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
1
2
3
4
5
6
7
8




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data