FFCP PHASE1:Hg19::chr2:181556734..181556740,+: Difference between revisions
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|id=chr2:181556734..181556740,+
|short_description=p@chr2:181556734..181556740,+
|description=CAGE_peak_at_chr2:181556734..181556740,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:181556734..181556740,+ | |||
|coexpression_cluster_id=C321 | |||
|description=CAGE_peak_at_chr2:181556734..181556740,+ | |||
|id=chr2:181556734..181556740,+ | |||
|ontology_enrichment_celltype=CL:0000188!7.63e-10!9;CL:0000239!8.25e-09!3;CL:1000615!8.25e-09!3;CL:0002306!8.25e-09!3;CL:0000594!2.09e-08!3;CL:0002149!2.53e-08!6;CL:0002255!2.53e-08!6;CL:1000507!1.38e-07!12;CL:1000494!1.38e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002149;2.71e-15;6!CL:0002255;2.71e-15;6!CL:1001319;6.99e-07;1!CL:1000600;6.99e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,2.71e-15,6;CL:0002255,2.71e-15,6;CL:1001319,6.99e-07,1;CL:1000600,6.99e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006603;1.25e-09;65!UBERON:0009847;1.33e-08;3!UBERON:0003353;1.33e-08;3 | |||
|ontology_enrichment_disease=DOID:1036!2.09e-09!8;DOID:3001!2.53e-08!6 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.18e-17;8!DOID:3001;2.71e-15;6!DOID:299;4.77e-10;25!DOID:0060085;4.69e-07;1!DOID:3165;4.69e-07;1!DOID:0060121;4.69e-07;1!DOID:2438;4.69e-07;1!DOID:4418;4.69e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.23e-17,8;DOID:3001,2.71e-15,6;DOID:299,4.94e-10,25;DOID:305,2.35e-07,106;DOID:0060085,4.69e-07,1;DOID:3165,4.69e-07,1;DOID:0060121,4.69e-07,1;DOID:2438,4.69e-07,1;DOID:4418,4.69e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0006554!8.65e-16!44;UBERON:0001008!2.47e-15!45;UBERON:0000489!6.91e-10!32;UBERON:0003064!1.25e-09!37;UBERON:0006853!8.25e-09!3;UBERON:0007685!8.25e-09!3;UBERON:0004134!8.25e-09!3;UBERON:0002113!3.03e-08!27;UBERON:0003918!3.03e-08!27;UBERON:0005095!3.03e-08!27;UBERON:0007687!3.03e-08!27;UBERON:0009773!1.38e-07!12;UBERON:0001231!1.38e-07!12;UBERON:0004810!1.38e-07!12;UBERON:0001255!6.47e-07!2;UBERON:0001556!6.47e-07!2;UBERON:0003101!8.88e-07!22;UBERON:0000079!8.88e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;7.76e-13;30!UBERON:0001008;7.76e-13;30!UBERON:0001255;6.34e-12;2!UBERON:0001556;6.34e-12;2!UBERON:0000489;1.58e-10;29!UBERON:0002113;2.29e-07;24!UBERON:0011143;2.29e-07;24!UBERON:0004645;6.99e-07;1!UBERON:0001256;6.99e-07;1!UBERON:0001259;6.99e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001255,5.84e-12,2;UBERON:0001556,5.84e-12,2;UBERON:0006554,1.07e-11,47;UBERON:0001008,2.07e-11,48;UBERON:0000489,9.74e-10,31;UBERON:0004645,6.99e-07,1;UBERON:0001256,6.99e-07,1;UBERON:0001259,6.99e-07,1;UBERON:0000989,9.25e-07,1;UBERON:0008811,9.25e-07,1;UBERON:0006258,9.25e-07,1;UBERON:0005876,9.25e-07,1;UBERON:0004874,9.25e-07,1 | |||
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| ||
|short_description=p@chr2:181556734..181556740,+ | |||
}} | }} |
Latest revision as of 03:55, 29 July 2015
Short description: | p@chr2:181556734..181556740, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:181556734..181556740, + |
Coexpression cluster: | C321_synovial_anaplastic_maxillary_glassy_keratoacanthoma_rhabdomyosarcoma_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 2.71e-15 | 6 |
stromal cell of endometrium | 2.71e-15 | 6 |
bladder cell | 6.99e-07 | 1 |
lower urinary tract cell | 6.99e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
urinary bladder | 5.84e-12 | 2 |
lower urinary tract | 5.84e-12 | 2 |
urinary system structure | 1.07e-11 | 47 |
renal system | 2.07e-11 | 48 |
cavitated compound organ | 9.74e-10 | 31 |
urinary bladder urothelium | 6.99e-07 | 1 |
wall of urinary bladder | 6.99e-07 | 1 |
mucosa of urinary bladder | 6.99e-07 | 1 |
penis | 9.25e-07 | 1 |
intromittent organ | 9.25e-07 | 1 |
lateral plate mesenchyme | 9.25e-07 | 1 |
undifferentiated genital tubercle | 9.25e-07 | 1 |
somatopleure | 9.25e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.23e-17 | 8 |
female reproductive endometrioid cancer | 2.71e-15 | 6 |
adenocarcinoma | 4.94e-10 | 25 |
carcinoma | 2.35e-07 | 106 |
organ system benign neoplasm | 4.69e-07 | 1 |
skin benign neoplasm | 4.69e-07 | 1 |
integumentary system benign neoplasm | 4.69e-07 | 1 |
dermis tumor | 4.69e-07 | 1 |
cutaneous fibrous histiocytoma | 4.69e-07 | 1 |