FFCP PHASE1:Mm9::chr11:68715040..68715135,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19941,100034726 | |EntrezGene=19941,100034726 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1577 | |MCL_coexpression_id=1577 | ||
|TSSclassifier=NA | |||
|UniProt=P61255,B1ARA5,B1ARA3,Q4FZH2,D3Z3Q9 | |UniProt=P61255,B1ARA5,B1ARA3,Q4FZH2,D3Z3Q9 | ||
|association_with_transcript=0bp_to_ENSMUST00000073471,ENSMUST00000101014,ENSMUST00000128952,NM_009080,NR_003373,uc007joh.1_5end | |association_with_transcript=0bp_to_ENSMUST00000073471,ENSMUST00000101014,ENSMUST00000128952,NM_009080,NR_003373,uc007joh.1_5end | ||
|cluster_id=chr11:68715040..68715135,+ | |||
|description=CAGE_peak_1_at_Gm15772_5end,CAGE_peak_1_at_Rpl26_5end | |description=CAGE_peak_1_at_Gm15772_5end,CAGE_peak_1_at_Rpl26_5end | ||
|id=chr11:68715040..68715135,+ | |id=chr11:68715040..68715135,+ | ||
|ontology_enrichment_celltype=CL:0000144!3.49e-21!121;CL:0000012!3.49e-21!121;CL:0002371!7.51e-20!118;CL:0000548!3.00e-19!115;CL:0000004!3.00e-19!115;CL:0000255!3.00e-19!115;CL:0000034!2.74e-18!97;CL:0000063!3.34e-16!66;CL:0000723!2.71e-15!91;CL:0000048!2.71e-15!91;CL:0000219!5.57e-14!54;CL:0000988!1.11e-13!32;CL:0002032!1.11e-13!32;CL:0000037!1.11e-13!32;CL:0000566!1.11e-13!32;CL:0000837!1.11e-13!32;CL:0002320!1.42e-13!46;CL:0000134!1.42e-13!46;CL:0002031!1.63e-10!25;CL:0000049!1.98e-08!19;CL:0000763!6.88e-07!16 | |ontology_enrichment_celltype=CL:0000144!3.49e-21!121;CL:0000012!3.49e-21!121;CL:0002371!7.51e-20!118;CL:0000548!3.00e-19!115;CL:0000004!3.00e-19!115;CL:0000255!3.00e-19!115;CL:0000034!2.74e-18!97;CL:0000063!3.34e-16!66;CL:0000723!2.71e-15!91;CL:0000048!2.71e-15!91;CL:0000219!5.57e-14!54;CL:0000988!1.11e-13!32;CL:0002032!1.11e-13!32;CL:0000037!1.11e-13!32;CL:0000566!1.11e-13!32;CL:0000837!1.11e-13!32;CL:0002320!1.42e-13!46;CL:0000134!1.42e-13!46;CL:0002031!1.63e-10!25;CL:0000049!1.98e-08!19;CL:0000763!6.88e-07!16 | ||
|ontology_enrichment_celltype_v019_2=CL:0000034,2.74e-18,97;CL:0000723,2.71e-15,91;CL:0000048,2.71e-15,91;CL:0000219,5.57e-14,54;CL:0000988,1.11e-13,32;CL:0002032,1.11e-13,32;CL:0000037,1.11e-13,32;CL:0000837,1.11e-13,32;CL:0002320,1.42e-13,46;CL:0000134,1.42e-13,46;CL:0002031,1.63e-10,25;CL:0000049,1.98e-08,19;CL:0000763,6.88e-07,16 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.42e-13!46;UBERON:0002193!8.01e-07!48 | |ontology_enrichment_uberon=UBERON:0002384!1.42e-13!46;UBERON:0002193!8.01e-07!48 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.42e-13,46;UBERON:0002193,8.01e-07,48;UBERON:0002405,8.01e-07,48 | |||
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| |phase1_expression=13.1322054625931,7.32848356042658,6.82498859084304,4.83942738090928,6.51164448930251,15.4448930158939,19.6234618100242,14.8491821957813,49.2760527530834,71.857809580852,64.8916099574664,73.6297027526955,15.5792664237397,13.0256399604306,15.3230490435205,32.1935675149823,19.5877325875881,18.7699988388151,14.2599010949968,19.9463136345074,19.1347402839907,12.3120779489098,28.7319768052829,18.5591210440352,22.7115188256498,12.6331032105304,20.6765758156356,18.3150547783006,15.2018735565099,15.8778981748756,34.8116901728828,56.5177299379072,30.7532393792285,31.6963362030877,30.6182716936351,30.4209401006041,28.3795405204693,9.20769587621197,11.720030167857,12.5645698553712,8.2352408324342,5.46436387966757,4.85510353031154,12.5896817975577,12.9762471960979,20.0065959856233,7.04152209913235,11.9913836009246,9.22681967484782,11.2769341463084,9.37909024889929,5.75010257459886,22.9862170299099,11.6057942721815,17.4768775554081,14.406528418013,8.88253663810146,5.67239301505187,12.5436205732951,6.87688273053643,10.775133859605,14.2314703469035,8.89294796111139,8.09909745553259,11.8663963508037,8.5257613793532,7.49000276296012,7.68436610643109,7.36196247390191,8.37036817656482,6.30974884054146,15.996455126613,10.3808214247258,6.00204916153275,6.99671938433125,12.8690630125403,6.60695285996332,7.40586560894089,7.52672012955593,8.70449499019279,12.4423195299277,14.0646610050325,9.77140496504833,11.8180148106653,8.55670187550137,7.95497180778903,9.8236459751381,11.5567656411686,52.1753472065638,24.8630432751324,24.0587525622393,13.7667820317022,12.9194553404473,9.17495425784289,1.94932925234301,2.24013443548668,8.84799846830037,15.8500199997594,28.3166745017127,20.4936953215997,15.6336195952115,7.69958864485907,0,7.11066703153331,53.9062692117923,44.5913363236174,37.9143333761088,8.22123933977232,3.36619248741323,4.30482203287992,14.5727674483554,8.22056791442781,7.61031140944993,8.28974523039424,5.29149182110672,6.03199638382442,4.44950941921873,3.61498392299779,3.5384422077995,7.76480879747564,7.95029466457417,9.69750506270444,3.72783522436244,5.5628351432194,4.39838084308256,5.62005521458901,17.7326384268762,41.3932884385451,26.5576774582705,5.24267237916879,3.20250421973039,8.04187853522332,4.69325664519146,6.39288643325826,5.194701113989,6.97637431191358,7.43427356107309,7.34001126599549,10.108910337347,3.99839526184301,9.36867189331467,11.0353010128067,7.20248519221397,8.59017461663576,5.78310242786287,6.27757229395764,6.93392761741993,3.3631438196072,8.62271971731369,10.4008344092301,7.9178005873777,7.01426343768239,7.22922847986555,6.268538997399,6.37924622864625,15.723707078661,28.7907406798426,34.9993153676013,16.4814829649444,7.87077935634907,8.91199027928165,12.064158117888,4.97163944728941,9.05115466038058,6.63348585415727,3.25547522650571,7.24338183778972,5.83826711835847,4.44311594766397,4.43252153013557,2.91847714365081,4.82459958503597,4.17145219052996,2.54992195644706,5.25724871410318,6.27718135513635,1.65209391491899,10.3135720998782,9.81125952462076,9.75394021813842,9.40732467651281,7.66397393568702,4.44756087689741,5.51654315726422,10.4396393539793,6.58795818896044,6.28338022000674,3.78017296878187,6.43381487493096,8.08937467788799,3.6743468478698,4.38110801159608,13.845756769575,11.4248512609729,5.63538678365402,9.9789150644204,8.14600446104028,6.38235961001899,5.88099795255593,5.31396532726568,7.37894020854462,6.54004968785543,8.30067355844017,16.5176654658933,16.5109555895091,11.9176919563972,14.2002084971952,11.576503668116,15.2775511068852,5.75392274901621,5.18832725680113,16.4736847912849,4.31304619582064,6.69853705803306,4.99260276983297,5.30415643688935,11.3020370518805,4.82443521363367,3.14080423283228,16.2962614122617,8.96307370431142,13.7493519477902,7.27539769694356,4.69017520837084,6.42717830392237,4.68320754858717,4.88668946729192,5.3151525515706,4.78364305972461,6.06294264448231,5.18054945597687,3.7608755231193,15.0791283939272,13.053736411649,12.7858710984949,6.62248191131358,4.81651769963376,7.2671245687166,18.8525187183177,4.03953483526997,8.83423014365519,11.7131623288992,7.75524231838076,11.2315335037699,8.24355094104858,8.49229592366497,6.47697122679831,9.05993159525067,9.48690667071656,2.57057053137446,3.40656204499845,6.58842733568844,6.67836533349662,4.61916344323099,9.2921596837974,18.4513283477786,24.4882081141448,20.5579536933929,12.4026795009925,8.30074899448604,8.26970538138308,9.08834323693764,6.77345018930971,17.3820216864699,9.48767477174989,14.4389760547462,5.7874732978144,12.784337676223,8.92574918101006,6.64444808597936,3.72414490648775,10.3453914209201,6.41741180348272,7.30715877875038,9.62154003061212,2.96564899209348,6.61585194164886,5.44124634706884,4.68246837418126,7.96130609051657,7.63983001620073,10.1767357841938,5.82961673259701,4.45020724825223,10.423123728669,8.46186158649212,12.5932278611404,13.9392658183471,13.5327285443815,14.870581258424,16.1479508494163,19.1733489683411,13.681797406638,6.68269432610579,9.80641580101519,7.522820283693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| ||
|short_description=p1@Gm15772,p1@Rpl26 | |short_description=p1@Gm15772,p1@Rpl26 | ||
}} | }} |
Latest revision as of 23:31, 1 October 2015
Short description: | p1@Gm15772, p1@Rpl26 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm15772_5end, CAGE_peak_1_at_Rpl26_5end |
Coexpression cluster: | MCL_coexpression_mm9:1577 |
Association with transcript: | 0bp_to_ENSMUST00000073471, ENSMUST00000101014, ENSMUST00000128952, NM_009080, NR_003373, uc007joh.1_5end |
EntrezGene: | 19941,100034726 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 2.74e-18 | 97 |
somatic stem cell | 2.71e-15 | 91 |
multi fate stem cell | 2.71e-15 | 91 |
motile cell | 5.57e-14 | 54 |
hematopoietic cell | 1.11e-13 | 32 |
hematopoietic oligopotent progenitor cell | 1.11e-13 | 32 |
hematopoietic stem cell | 1.11e-13 | 32 |
hematopoietic multipotent progenitor cell | 1.11e-13 | 32 |
connective tissue cell | 1.42e-13 | 46 |
mesenchymal cell | 1.42e-13 | 46 |
hematopoietic lineage restricted progenitor cell | 1.63e-10 | 25 |
common myeloid progenitor | 1.98e-08 | 19 |
myeloid cell | 6.88e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.42e-13 | 46 |
hemolymphoid system | 8.01e-07 | 48 |
immune system | 8.01e-07 | 48 |