FFCP PHASE1:Hg19::chr2:230786679..230786758,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:230786679..230786758,-
|short_description=p1@TRIP12
|description=CAGE_peak_1_at_TRIP12_5end
|association_with_transcript=0bp_to_ENST00000283943,ENST0000034...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9320 | |EntrezGene=9320 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12306 | |HGNC=12306 | ||
|TSSclassifier=strong | |||
|UniProt=Q14669,F8W9P3,Q14CA3,B4DYJ6 | |UniProt=Q14669,F8W9P3,Q14CA3,B4DYJ6 | ||
|association_with_transcript=0bp_to_ENST00000283943,ENST00000343290,ENST00000389044,ENST00000479037,ENST00000543084_5end | |||
|cluster_id=chr2:230786679..230786758,- | |||
|description=CAGE_peak_1_at_TRIP12_5end | |||
|id=chr2:230786679..230786758,- | |||
|ontology_enrichment_celltype=CL:0000766!1.54e-13!76;CL:0002009!2.08e-13!65;CL:0002194!5.85e-13!63;CL:0000576!5.85e-13!63;CL:0000040!5.85e-13!63;CL:0000559!5.85e-13!63;CL:0000839!1.70e-12!70;CL:0002057!2.54e-12!42;CL:0000557!1.87e-11!71;CL:0000860!7.81e-10!45;CL:0000763!1.86e-09!112;CL:0000049!1.86e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.61e-13;33!CL:0002057;1.61e-13;33!CL:0000473;8.12e-13;39!CL:0000234;8.12e-13;39!CL:0000576;3.76e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,6.82e-16,61;CL:0000766,8.79e-16,72;CL:0002194,1.95e-15,59;CL:0000576,1.95e-15,59;CL:0000040,1.95e-15,59;CL:0000559,1.95e-15,59;CL:0000839,9.69e-15,66;CL:0000473,6.23e-14,48;CL:0000234,6.23e-14,48;CL:0000557,1.51e-13,67;CL:0000860,2.54e-12,42;CL:0002057,2.54e-12,42;CL:0000763,7.92e-11,108;CL:0000049,7.92e-11,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.38e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.52e-15!115;UBERON:0002390!8.10e-12!102;UBERON:0003061!8.10e-12!102;UBERON:0002193!5.33e-11!112;UBERON:0004765!1.36e-08!101;UBERON:0001434!1.36e-08!101;UBERON:0002371!2.90e-08!80;UBERON:0001474!4.11e-08!86;UBERON:0002405!6.82e-08!115;UBERON:0000062!1.15e-07!511;UBERON:0000467!1.60e-07!625;UBERON:0000480!1.99e-07!626;UBERON:0000468!3.81e-07!659 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.05e-14,114;UBERON:0002390,1.67e-13,98;UBERON:0003061,1.67e-13,98;UBERON:0002193,1.63e-12,108;UBERON:0001434,2.70e-10,100;UBERON:0004765,5.86e-10,90;UBERON:0002371,8.38e-10,76;UBERON:0002405,1.27e-09,93;UBERON:0001474,1.45e-09,82;UBERON:0002204,7.59e-07,167 | |||
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554707233 | ||
|short_description=p1@TRIP12 | |||
}} | }} |
Latest revision as of 05:51, 25 September 2015
Short description: | p1@TRIP12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIP12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000283943, ENST00000343290, ENST00000389044, ENST00000479037, ENST00000543084_5end |
EntrezGene: | TRIP12 |
HGNC: | 12306 |
UniProt: | Q14669F8W9P3Q14CA3B4DYJ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 6.82e-16 | 61 |
myeloid leukocyte | 8.79e-16 | 72 |
monopoietic cell | 1.95e-15 | 59 |
monocyte | 1.95e-15 | 59 |
monoblast | 1.95e-15 | 59 |
promonocyte | 1.95e-15 | 59 |
myeloid lineage restricted progenitor cell | 9.69e-15 | 66 |
defensive cell | 6.23e-14 | 48 |
phagocyte | 6.23e-14 | 48 |
granulocyte monocyte progenitor cell | 1.51e-13 | 67 |
classical monocyte | 2.54e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.54e-12 | 42 |
myeloid cell | 7.92e-11 | 108 |
common myeloid progenitor | 7.92e-11 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.05e-14 | 114 |
hematopoietic system | 1.67e-13 | 98 |
blood island | 1.67e-13 | 98 |
hemolymphoid system | 1.63e-12 | 108 |
skeletal system | 2.70e-10 | 100 |
skeletal element | 5.86e-10 | 90 |
bone marrow | 8.38e-10 | 76 |
immune system | 1.27e-09 | 93 |
bone element | 1.45e-09 | 82 |
musculoskeletal system | 7.59e-07 | 167 |