FFCP PHASE1:Mm9::chr8:85387297..85387308,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=330812 | |EntrezGene=330812 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2324 | |MCL_coexpression_id=2324 | ||
|TSSclassifier=NA | |||
|UniProt=Q5DTZ6 | |UniProt=Q5DTZ6 | ||
|association_with_transcript=42bp_to_ENSMUST00000078525,NM_177378,uc009mjq.1,uc009mjt.2_5end | |association_with_transcript=42bp_to_ENSMUST00000078525,NM_177378,uc009mjq.1,uc009mjt.2_5end | ||
|cluster_id=chr8:85387297..85387308,+ | |||
|description=CAGE_peak_7_at_Rnf150_5end | |description=CAGE_peak_7_at_Rnf150_5end | ||
|id=chr8:85387297..85387308,+ | |id=chr8:85387297..85387308,+ | ||
|ontology_enrichment_celltype=CL:0000393!8.14e-15!39;CL:0000211!8.14e-15!39;CL:0000540!2.82e-12!33;CL:0000047!2.82e-12!33;CL:0000031!2.82e-12!33;CL:0000404!2.82e-12!33;CL:0000055!1.06e-11!50;CL:0000221!1.97e-10!44;CL:0000133!1.97e-10!44;CL:0002319!7.55e-10!43;CL:0000107!6.91e-08!9 | |ontology_enrichment_celltype=CL:0000393!8.14e-15!39;CL:0000211!8.14e-15!39;CL:0000540!2.82e-12!33;CL:0000047!2.82e-12!33;CL:0000031!2.82e-12!33;CL:0000404!2.82e-12!33;CL:0000055!1.06e-11!50;CL:0000221!1.97e-10!44;CL:0000133!1.97e-10!44;CL:0002319!7.55e-10!43;CL:0000107!6.91e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,5.88e-24,9;CL:0000192,2.34e-18,3;CL:0000359,2.34e-18,3;CL:0002539,2.34e-18,3;CL:0000514,2.34e-18,3;CL:0000393,2.79e-17,39;CL:0000211,2.79e-17,39;CL:0000723,3.58e-11,91;CL:0000048,3.58e-11,91;CL:0000540,7.11e-11,33;CL:0000047,7.11e-11,33;CL:0000031,7.11e-11,33;CL:0000404,7.11e-11,33;CL:0000034,2.24e-10,97;CL:0000680,1.80e-09,6;CL:0000187,1.80e-09,6;CL:0000056,1.80e-09,6;CL:0002321,5.06e-09,70;CL:0000222,3.43e-08,7;CL:0002319,3.81e-08,43;CL:0000221,6.11e-08,44;CL:0000133,6.11e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!6.91e-08!9;UBERON:0000010!2.90e-07!11;UBERON:0000073!3.99e-07!75;UBERON:0001016!3.99e-07!75;UBERON:0001017!4.95e-07!73;UBERON:0005743!4.95e-07!73;UBERON:0004121!8.38e-07!102;UBERON:0000924!8.38e-07!102;UBERON:0006601!8.38e-07!102 | |ontology_enrichment_uberon=UBERON:0002410!6.91e-08!9;UBERON:0000010!2.90e-07!11;UBERON:0000073!3.99e-07!75;UBERON:0001016!3.99e-07!75;UBERON:0001017!4.95e-07!73;UBERON:0005743!4.95e-07!73;UBERON:0004121!8.38e-07!102;UBERON:0000924!8.38e-07!102;UBERON:0006601!8.38e-07!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,5.88e-24,9;UBERON:0000010,1.48e-19,11;UBERON:0010313,5.95e-19,3;UBERON:0002342,5.95e-19,3;UBERON:0002005,5.95e-19,3;UBERON:0005428,5.95e-19,3;UBERON:0005062,5.95e-19,3;UBERON:0000013,1.03e-18,3;UBERON:0001135,2.34e-18,3;UBERON:0004237,2.34e-18,3;UBERON:0004695,2.34e-18,3;UBERON:0002111,2.34e-18,3;UBERON:0004178,2.34e-18,3;UBERON:0000947,6.32e-14,4;UBERON:0001637,6.32e-14,4;UBERON:0004573,6.32e-14,4;UBERON:0003509,6.32e-14,4;UBERON:0004571,6.32e-14,4;UBERON:0010191,6.32e-14,4;UBERON:0004572,6.32e-14,4;UBERON:0000055,2.95e-11,5;UBERON:0007500,2.95e-11,5;UBERON:0001981,2.95e-11,5;UBERON:0002049,2.95e-11,5;UBERON:0007798,2.95e-11,5;UBERON:0004537,2.95e-11,5;UBERON:0006965,2.95e-11,5 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,1.11514624341466,4.03802854755699,0.782391344348039,0,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0.202316460859598,1.5869729378161,0.633831403506179,0,0,0,0.988866362566974,0.7104801149461,0.898800331555214,0,0.311068836925433,0.540023753326763,0,0.285650984403804,0.441737081903227,0.734944795289724,0.383381884072945,0,0,0,0.614426133024974,0.395658863190582,0.640413505216868,0,0.279182999001381,0,0.30559649555362,1.17851434189467,0.569486723196412,0.745597783301202,0,0.453429360640713,0,0,0,0,0,0,0.702222100658759,0.852151612890289,1.03914401841148,1.06001872353102,0.704217098883403,0,0,0,0,0,0,0,0,0.445326417194474,0,0,0,0,0,0.251333182659351,0,0.289198713839823,0,0.161766849947409,0.441683036920787,0,0,0.292780797011547,0.628340120440365,0.255457055208591,0,0,0,0,0.457500602818626,0.251308704225729,0,0,0,0.162241263067758,0.305518091550949,0.373220911830279,0,0,0.520481771850815,0.229902104433473,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.749613796477831,0.258703370739016,0,0.378212160335639,0.527853372491847,0,0,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0.492502392237286,0.162137619091711,0.146199987425332,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0,0.156998727841375,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0.189491411770485,0.325929952884052,0,0.469380496577004,0.167506257441816,0.238043640886014,0.390267295715598,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0,1.50791283939272,0,0,0,0.160550589987792,0,1.3114795630134,0.504941854408746,1.89304931649754,3.12350995437311,1.50796378412959,0.477937595905104,0.445597348164788,0.283076530788832,1.21443210502468,2.33804686329049,2.37172666767914,0.321321316421807,0.141940085208269,0,0.488660878060728,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0.32977250588296,0,0.120625849856312,0,0,0.291480836629851,0,0.170870880797853,0.412773735926445,0.185194527369712,0,0,0,0,0.279902904647316,0.138199973804424,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0,0,0.147689527174577,0.100966449948148,0.228620419965,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0.386379188064381,0.187682475451182,0.36630324853453,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0.51776031175182,0,0.399024873401031,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0.187283014939765,0.128050304809739,0,0,0,0,0,0.147198920134397,0,0.354951612318675,0.476872379894642,0.290692833264657,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0.561142271657738,0,0.197008964751127,0,0,0,0.249810577937946,0.233931608445408,0,0.191288332068843,0.220591419119515,0.231867835620421 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,1.11514624341466,4.03802854755699,0.782391344348039,0,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0.202316460859598,1.5869729378161,0.633831403506179,0,0,0,0.988866362566974,0.7104801149461,0.898800331555214,0,0.311068836925433,0.540023753326763,0,0.285650984403804,0.441737081903227,0.734944795289724,0.383381884072945,0,0,0,0.614426133024974,0.395658863190582,0.640413505216868,0,0.279182999001381,0,0.30559649555362,1.17851434189467,0.569486723196412,0.745597783301202,0,0.453429360640713,0,0,0,0,0,0,0.702222100658759,0.852151612890289,1.03914401841148,1.06001872353102,0.704217098883403,0,0,0,0,0,0,0,0,0.445326417194474,0,0,0,0,0,0.251333182659351,0,0.289198713839823,0,0.161766849947409,0.441683036920787,0,0,0.292780797011547,0.628340120440365,0.255457055208591,0,0,0,0,0.457500602818626,0.251308704225729,0,0,0,0.162241263067758,0.305518091550949,0.373220911830279,0,0,0.520481771850815,0.229902104433473,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.749613796477831,0.258703370739016,0,0.378212160335639,0.527853372491847,0,0,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0.492502392237286,0.162137619091711,0.146199987425332,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0,0.156998727841375,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0.189491411770485,0.325929952884052,0,0.469380496577004,0.167506257441816,0.238043640886014,0.390267295715598,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0,1.50791283939272,0,0,0,0.160550589987792,0,1.3114795630134,0.504941854408746,1.89304931649754,3.12350995437311,1.50796378412959,0.477937595905104,0.445597348164788,0.283076530788832,1.21443210502468,2.33804686329049,2.37172666767914,0.321321316421807,0.141940085208269,0,0.488660878060728,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0.32977250588296,0,0.120625849856312,0,0,0.291480836629851,0,0.170870880797853,0.412773735926445,0.185194527369712,0,0,0,0,0.279902904647316,0.138199973804424,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0,0,0.147689527174577,0.100966449948148,0.228620419965,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0.386379188064381,0.187682475451182,0.36630324853453,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0.51776031175182,0,0.399024873401031,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0.187283014939765,0.128050304809739,0,0,0,0,0,0.147198920134397,0,0.354951612318675,0.476872379894642,0.290692833264657,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0.561142271657738,0,0.197008964751127,0,0,0,0.249810577937946,0.233931608445408,0,0.191288332068843,0.220591419119515,0.231867835620421 | ||
|short_description=p7@Rnf150 | |short_description=p7@Rnf150 | ||
}} | }} |
Latest revision as of 20:24, 25 September 2015
Short description: | p7@Rnf150 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Rnf150_5end |
Coexpression cluster: | MCL_coexpression_mm9:2324 |
Association with transcript: | 42bp_to_ENSMUST00000078525, NM_177378, uc009mjq.1, uc009mjt.2_5end |
EntrezGene: | Rnf150 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 5.88e-24 | 9 |
smooth muscle cell | 2.34e-18 | 3 |
vascular associated smooth muscle cell | 2.34e-18 | 3 |
aortic smooth muscle cell | 2.34e-18 | 3 |
smooth muscle myoblast | 2.34e-18 | 3 |
electrically responsive cell | 2.79e-17 | 39 |
electrically active cell | 2.79e-17 | 39 |
somatic stem cell | 3.58e-11 | 91 |
multi fate stem cell | 3.58e-11 | 91 |
neuron | 7.11e-11 | 33 |
neuronal stem cell | 7.11e-11 | 33 |
neuroblast | 7.11e-11 | 33 |
electrically signaling cell | 7.11e-11 | 33 |
stem cell | 2.24e-10 | 97 |
muscle precursor cell | 1.80e-09 | 6 |
muscle cell | 1.80e-09 | 6 |
myoblast | 1.80e-09 | 6 |
embryonic cell | 5.06e-09 | 70 |
mesodermal cell | 3.43e-08 | 7 |
neural cell | 3.81e-08 | 43 |
ectodermal cell | 6.11e-08 | 44 |
neurectodermal cell | 6.11e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 5.88e-24 | 9 |
peripheral nervous system | 1.48e-19 | 11 |
neural crest-derived structure | 5.95e-19 | 3 |
neural crest | 5.95e-19 | 3 |
enteric nervous system | 5.95e-19 | 3 |
vagal neural crest | 5.95e-19 | 3 |
neural fold | 5.95e-19 | 3 |
sympathetic nervous system | 1.03e-18 | 3 |
smooth muscle tissue | 2.34e-18 | 3 |
blood vessel smooth muscle | 2.34e-18 | 3 |
arterial system smooth muscle | 2.34e-18 | 3 |
artery smooth muscle tissue | 2.34e-18 | 3 |
aorta smooth muscle tissue | 2.34e-18 | 3 |
aorta | 6.32e-14 | 4 |
artery | 6.32e-14 | 4 |
systemic artery | 6.32e-14 | 4 |
arterial blood vessel | 6.32e-14 | 4 |
systemic arterial system | 6.32e-14 | 4 |
aortic system | 6.32e-14 | 4 |
arterial system | 6.32e-14 | 4 |
vessel | 2.95e-11 | 5 |
epithelial tube open at both ends | 2.95e-11 | 5 |
blood vessel | 2.95e-11 | 5 |
vasculature | 2.95e-11 | 5 |
vascular system | 2.95e-11 | 5 |
blood vasculature | 2.95e-11 | 5 |
vascular cord | 2.95e-11 | 5 |