FFCP PHASE1:Mm9::chr8:26061312..26061316,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2479 | |MCL_coexpression_id=2479 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:26061312..26061316,- | |||
|description=CAGE_peak_at_chr8:26061312..26061316,- | |description=CAGE_peak_at_chr8:26061312..26061316,- | ||
|id=chr8:26061312..26061316,- | |id=chr8:26061312..26061316,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,6.18e-13,3;CL:0002202,6.18e-13,3;CL:0000069,6.18e-13,3;CL:0002632,6.18e-13,3;CL:0002368,6.18e-13,3;CL:0000307,6.18e-13,3;CL:0000377,6.18e-13,3;CL:0002494,1.15e-12,3;CL:0000737,1.15e-12,3;CL:0000746,1.15e-12,3;CL:0000513,1.15e-12,3;CL:0000680,1.29e-10,6;CL:0000187,1.29e-10,6;CL:0000056,1.29e-10,6;CL:0000222,4.13e-09,7;CL:0002476,2.51e-08,2;CL:0000355,4.25e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002329!7.51e-07!11;UBERON:0003077!7.51e-07!11;UBERON:0003059!7.51e-07!11;UBERON:0007282!7.51e-07!11;UBERON:0009618!7.51e-07!11;UBERON:0007285!7.51e-07!11 | |ontology_enrichment_uberon=UBERON:0002329!7.51e-07!11;UBERON:0003077!7.51e-07!11;UBERON:0003059!7.51e-07!11;UBERON:0007282!7.51e-07!11;UBERON:0009618!7.51e-07!11;UBERON:0007285!7.51e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,6.18e-13,3;UBERON:0001005,6.18e-13,3;UBERON:0007196,6.18e-13,3;UBERON:0001558,6.18e-13,3;UBERON:0001134,4.25e-07,9;UBERON:0002036,4.25e-07,9;UBERON:0002385,4.25e-07,9;UBERON:0000486,4.25e-07,9;UBERON:0007503,4.25e-07,9;UBERON:0001015,4.25e-07,9;UBERON:0002329,4.25e-07,9;UBERON:0003082,4.25e-07,9;UBERON:0003059,4.25e-07,9;UBERON:0007282,4.25e-07,9;UBERON:0004290,4.25e-07,9;UBERON:0009618,4.25e-07,9 | |||
|phase1_expression=0.480446541314382,0,0,0.30246421130683,0,0,0.233612640595526,0.129123323441576,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0.68822784320151,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0.418531630736908,0.7813353445238,0.523523743973798,0,0,0,0.755380907853464,0.709638518536602,1.10128051297009,0,0,0.219686182734472,0,0.419959264876088,0,0.167782606057736,0,0,6.43148590089868,1.71920063963254,3.09403255366465,0.202316460859598,0.528990979272033,0,0,0.889294796111139,0,0,0,0.299600110518405,0,0,0.135005938331691,0.210324961351382,0.285650984403804,0.662605622854841,0,0,0,0,0.383062014255563,0.614426133024974,0.395658863190582,0,0,0.558365998002762,0.56276261003168,1.22238598221448,1.17851434189467,0.427115042397309,0.186399445825301,1.4387976733305,0.906858721281426,0.869593466105033,0,0,0,0.649776417447669,0.448026887097336,0.280888840263504,0.170430322578058,2.07828803682295,1.41335829804136,0.563373679106722,1.28326477414318,2.54805239706646,0,4.11332977921307,3.80039798212648,7.07734223020697,1.02765491747154,0.258937883647172,0.148442139064825,0.346970653532272,0.304465478312141,0.230615497256059,0.301445281105245,0.352766121407114,0.251333182659351,0.494389935468748,0.144599356919912,0,0,0.662524555381181,0,0,0,0,0,0,0.599902730993408,0.127070227073065,0,0,0.251308704225729,0.347648640384553,0.767146371990992,0,0.324482526135515,0,0,0.505445516867349,0.210441855886474,0.260240885925407,0,0,0.150704817835715,0.340182495756639,0.384341160854549,0.562210347358373,0.258703370739016,0,0,0.175951124163949,0,0,0.348252166522167,0,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0.590292695242212,0.462801338662135,0.930135779001631,1.07309360559848,0.350296027101508,0.16455984991348,0.656669856316381,0.405344047729279,0.584799949701329,0.439100230582101,0,0.210289948564127,0.102904612379284,0.330418782983798,0.264450566663544,0.213288250535234,0.696710015581316,0.257734922644187,0,0,0,0.949058123089023,0.823494773620054,1.25667604400135,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0.387904974335251,0,0.189709611372772,0.295220295959204,0.627994911365499,0.246794327843601,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0.549122826376163,5.75072826109418,0.372140947668503,0.312037673114561,0.252578877947112,0.538192240565737,1.4473305640901,0.554259570499814,0,0,0.509235257325564,0.469380496577004,0.167506257441816,0,0.390267295715598,0.315270288212382,0.44292937929755,0.318909537314974,0.327726629431476,0.863424909329478,1.01254341007058,1.50791283939272,1.08781136763742,0,0,0.481651769963376,0.35163505977661,0.491804836130026,0.504941854408746,0.631016438832513,0,0,0,0,0,0.404810701674894,0.292255857911312,0,0,0,0.890328018336276,0.325773918707152,0.329940245945071,0,0.242780636154981,0,0,0,0,0.775284879504663,0.363533729477506,0.712994756769443,0,0,0,0,0.36012218806262,0,0.214337035031592,0,0,0.329098041204242,0,0.23467170806371,0.21183207086382,0.441056796109924,0,0.484393280087717,0,0.358117032009409,0,0.291480836629851,0,0.170870880797853,0,0.370389054739423,0.376736914009382,0.27338845544205,0.228778173206523,0.169978429993855,0.139951452323658,0.138199973804424,0.954670618015114,0,0,0.540026704109006,0.418176592028937,0.655087691238533,0.134864346384821,0.330613822901344,1.04702376793612,0.518459893167171,0,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0.168956125490778,0.117357238645754,0.13020438484395,0,0.241584120826006,0,0,0,0.308132871494482,0,0,0.198681354781265,0,0.443068581523732,0,0.15241361331,0.100826185136841,0,0,0,0.226730383615211,0.221985953374065,0.269141569828427,0,0.19318959403219,0.375364950902364,0.549454872801795,0.214368379079066,0,0.564751842617067,0.460325236507177,0.572895513439397,1.03111909406213,0,0.755393897389701,0,0,0,0,0.207574695168353,0,0,0,0,0.183843508450014,0,0,0,0.505394423527595,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0.38581844092741,0.412085900803307,0.294397840268795,0.685738504770831,0.354951612318675,0.715308569841963,0.145346416632329,0.376437521661322,0.25384382367503,0.365855945745545,0,0.135804113845862,0,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0,0.191288332068843,0.220591419119515,0.231867835620421 | |phase1_expression=0.480446541314382,0,0,0.30246421130683,0,0,0.233612640595526,0.129123323441576,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0.68822784320151,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0.418531630736908,0.7813353445238,0.523523743973798,0,0,0,0.755380907853464,0.709638518536602,1.10128051297009,0,0,0.219686182734472,0,0.419959264876088,0,0.167782606057736,0,0,6.43148590089868,1.71920063963254,3.09403255366465,0.202316460859598,0.528990979272033,0,0,0.889294796111139,0,0,0,0.299600110518405,0,0,0.135005938331691,0.210324961351382,0.285650984403804,0.662605622854841,0,0,0,0,0.383062014255563,0.614426133024974,0.395658863190582,0,0,0.558365998002762,0.56276261003168,1.22238598221448,1.17851434189467,0.427115042397309,0.186399445825301,1.4387976733305,0.906858721281426,0.869593466105033,0,0,0,0.649776417447669,0.448026887097336,0.280888840263504,0.170430322578058,2.07828803682295,1.41335829804136,0.563373679106722,1.28326477414318,2.54805239706646,0,4.11332977921307,3.80039798212648,7.07734223020697,1.02765491747154,0.258937883647172,0.148442139064825,0.346970653532272,0.304465478312141,0.230615497256059,0.301445281105245,0.352766121407114,0.251333182659351,0.494389935468748,0.144599356919912,0,0,0.662524555381181,0,0,0,0,0,0,0.599902730993408,0.127070227073065,0,0,0.251308704225729,0.347648640384553,0.767146371990992,0,0.324482526135515,0,0,0.505445516867349,0.210441855886474,0.260240885925407,0,0,0.150704817835715,0.340182495756639,0.384341160854549,0.562210347358373,0.258703370739016,0,0,0.175951124163949,0,0,0.348252166522167,0,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0.590292695242212,0.462801338662135,0.930135779001631,1.07309360559848,0.350296027101508,0.16455984991348,0.656669856316381,0.405344047729279,0.584799949701329,0.439100230582101,0,0.210289948564127,0.102904612379284,0.330418782983798,0.264450566663544,0.213288250535234,0.696710015581316,0.257734922644187,0,0,0,0.949058123089023,0.823494773620054,1.25667604400135,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0.387904974335251,0,0.189709611372772,0.295220295959204,0.627994911365499,0.246794327843601,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0.549122826376163,5.75072826109418,0.372140947668503,0.312037673114561,0.252578877947112,0.538192240565737,1.4473305640901,0.554259570499814,0,0,0.509235257325564,0.469380496577004,0.167506257441816,0,0.390267295715598,0.315270288212382,0.44292937929755,0.318909537314974,0.327726629431476,0.863424909329478,1.01254341007058,1.50791283939272,1.08781136763742,0,0,0.481651769963376,0.35163505977661,0.491804836130026,0.504941854408746,0.631016438832513,0,0,0,0,0,0.404810701674894,0.292255857911312,0,0,0,0.890328018336276,0.325773918707152,0.329940245945071,0,0.242780636154981,0,0,0,0,0.775284879504663,0.363533729477506,0.712994756769443,0,0,0,0,0.36012218806262,0,0.214337035031592,0,0,0.329098041204242,0,0.23467170806371,0.21183207086382,0.441056796109924,0,0.484393280087717,0,0.358117032009409,0,0.291480836629851,0,0.170870880797853,0,0.370389054739423,0.376736914009382,0.27338845544205,0.228778173206523,0.169978429993855,0.139951452323658,0.138199973804424,0.954670618015114,0,0,0.540026704109006,0.418176592028937,0.655087691238533,0.134864346384821,0.330613822901344,1.04702376793612,0.518459893167171,0,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0.168956125490778,0.117357238645754,0.13020438484395,0,0.241584120826006,0,0,0,0.308132871494482,0,0,0.198681354781265,0,0.443068581523732,0,0.15241361331,0.100826185136841,0,0,0,0.226730383615211,0.221985953374065,0.269141569828427,0,0.19318959403219,0.375364950902364,0.549454872801795,0.214368379079066,0,0.564751842617067,0.460325236507177,0.572895513439397,1.03111909406213,0,0.755393897389701,0,0,0,0,0.207574695168353,0,0,0,0,0.183843508450014,0,0,0,0.505394423527595,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0.38581844092741,0.412085900803307,0.294397840268795,0.685738504770831,0.354951612318675,0.715308569841963,0.145346416632329,0.376437521661322,0.25384382367503,0.365855945745545,0,0.135804113845862,0,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0,0.191288332068843,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr8:26061312..26061316,- | |short_description=p@chr8:26061312..26061316,- | ||
}} | }} |
Latest revision as of 06:53, 6 August 2015
Short description: | p@chr8:26061312..26061316, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:26061312..26061316, - |
Coexpression cluster: | MCL_coexpression_mm9:2479 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 6.18e-13 | 3 |
epithelial cell of tracheobronchial tree | 6.18e-13 | 3 |
branched duct epithelial cell | 6.18e-13 | 3 |
epithelial cell of lower respiratory tract | 6.18e-13 | 3 |
respiratory epithelial cell | 6.18e-13 | 3 |
tracheal epithelial cell | 6.18e-13 | 3 |
tracheoblast | 6.18e-13 | 3 |
cardiocyte | 1.15e-12 | 3 |
striated muscle cell | 1.15e-12 | 3 |
cardiac muscle cell | 1.15e-12 | 3 |
cardiac muscle myoblast | 1.15e-12 | 3 |
muscle precursor cell | 1.29e-10 | 6 |
muscle cell | 1.29e-10 | 6 |
myoblast | 1.29e-10 | 6 |
mesodermal cell | 4.13e-09 | 7 |
bone marrow macrophage | 2.51e-08 | 2 |
multi-potent skeletal muscle stem cell | 4.25e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
trachea | 6.18e-13 | 3 |
respiratory airway | 6.18e-13 | 3 |
tracheobronchial tree | 6.18e-13 | 3 |
lower respiratory tract | 6.18e-13 | 3 |
skeletal muscle tissue | 4.25e-07 | 9 |
striated muscle tissue | 4.25e-07 | 9 |
muscle tissue | 4.25e-07 | 9 |
multilaminar epithelium | 4.25e-07 | 9 |
epithelial vesicle | 4.25e-07 | 9 |
musculature | 4.25e-07 | 9 |
somite | 4.25e-07 | 9 |
myotome | 4.25e-07 | 9 |
presomitic mesoderm | 4.25e-07 | 9 |
presumptive segmental plate | 4.25e-07 | 9 |
dermomyotome | 4.25e-07 | 9 |
trunk paraxial mesoderm | 4.25e-07 | 9 |