FFCP PHASE1:Mm9::chr3:106903846..106903907,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2357 | |MCL_coexpression_id=2357 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:106903846..106903907,+ | |||
|description=CAGE_peak_at_chr3:106903846..106903907,+ | |description=CAGE_peak_at_chr3:106903846..106903907,+ | ||
|id=chr3:106903846..106903907,+ | |id=chr3:106903846..106903907,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,8.73e-10,9;CL:0000221,8.64e-09,44;CL:0000133,8.64e-09,44;CL:0000540,2.40e-08,33;CL:0000047,2.40e-08,33;CL:0000031,2.40e-08,33;CL:0000404,2.40e-08,33;CL:0002319,6.30e-08,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.81e-13!102;UBERON:0000924!3.81e-13!102;UBERON:0006601!3.81e-13!102;UBERON:0000073!2.25e-10!75;UBERON:0001016!2.25e-10!75;UBERON:0001017!1.60e-09!73;UBERON:0005743!1.60e-09!73;UBERON:0000010!3.08e-07!11 | |ontology_enrichment_uberon=UBERON:0004121!3.81e-13!102;UBERON:0000924!3.81e-13!102;UBERON:0006601!3.81e-13!102;UBERON:0000073!2.25e-10!75;UBERON:0001016!2.25e-10!75;UBERON:0001017!1.60e-09!73;UBERON:0005743!1.60e-09!73;UBERON:0000010!3.08e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.12e-18,95;UBERON:0000924,4.12e-18,95;UBERON:0006601,4.12e-18,95;UBERON:0001016,6.03e-16,75;UBERON:0001017,2.13e-14,73;UBERON:0000010,9.24e-12,11;UBERON:0002410,8.73e-10,9;UBERON:0010371,1.62e-09,73;UBERON:0002346,1.25e-07,64;UBERON:0003075,1.25e-07,64;UBERON:0007284,1.25e-07,64;UBERON:0000073,1.99e-07,54;UBERON:0003076,3.13e-07,12;UBERON:0003057,3.13e-07,12 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.0874204024189974,1.33243904726265,0.809901069559304,0,0.315462165358238,0.548457734422955,0.42438965179803,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0,0.202316460859598,0,0,0,0,0,0,0,1.49800055259202,0.768436610643109,0,0,0.210324961351382,1.71390590642282,0.883474163806454,0,0.0958454710182364,0,1.10115880999389,3.06449611404451,2.61131106535614,0,0.182975287204819,0.52091337055676,2.79182999001381,0.56276261003168,3.51435969886663,3.53554302568401,3.98640706237488,0,1.13589289999776,3.92972112555285,0,0,0,0,0,0.448026887097336,0.842666520790511,0,0,0,13.5209682985613,0,0,0,0,0,0,0.34255163915718,2.33044095282455,0,0.173485326766136,0.304465478312141,1.15307748628029,1.05505848386836,1.76383060703557,0.502666365318702,0,2.31358971071859,0,0.970601099684455,1.10420759230197,0,0,3.51336956413857,4.81727425670947,0.255457055208591,0,0,0,2.24685959107234,2.28750301409313,0.251308704225729,0.869121600961382,1.79000820131231,2.90903262383384,2.59586020908412,0.305518091550949,1.61729061793121,0,1.68353484709179,0,0,0.180062129805349,0.30140963567143,0.612328492361951,0.384341160854549,1.12442069471675,2.32833033665114,0,0,0,0,0.278047249225598,0.696504333044333,0.823128545631774,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.405344047729279,0.584799949701329,0.439100230582101,0.536825675041487,1.68231958851302,0.308713837137853,0,0.264450566663544,0,0,0.257734922644187,0,0.667134131534611,0,0,0.329397909448022,1.00534083520108,0.198956472041151,0.779856348476481,0,0.648414149624083,0.597423819763102,0,0,0,0,0,0.210407459670956,0.0632365371242573,0.295220295959204,0,0.123397163921801,0.889357881261447,0,0.196558995113203,0,0.405720242777006,0.72353147925725,0.25462585178142,0.287696137450811,0.486405680325106,1.37280706594041,0,0.744281895337007,0.936113019343682,0.252578877947112,0.179397413521912,0.482443521363367,0.554259570499814,0,0.488894929326078,0.169745085775188,0.469380496577004,0.167506257441816,0.714130922658041,0.585400943573396,0.472905432318573,0,0.478364305972461,2.13022309130459,1.55416483679306,1.59113964439663,0,0,0,0,4.49541651965817,4.21962071731931,0,1.76729649043061,1.26203287766503,0.390438744296638,5.60100834105277,5.4962823529087,7.12955757063661,9.34152551603147,2.02405350837447,2.63030272120181,2.76701444562566,6.10510501201433,0.425820255624806,0,0,0.494910368917606,0,0,0,0.377210159511796,0.295301892880773,0.922305443831782,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,0,1.02131881726136,0,0,0,0,0.356737635204141,0.822745103010605,0.304464949114599,0,0,1.32317038832977,1.48397627647332,0.968786560175433,0.663442174209714,1.19372344003136,1.47726809770555,0.582961673259701,6.67531087237835,3.93003025835061,0,0,0.753473828018764,1.77702496037333,2.51655990527175,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,0.108005340821801,0.418176592028937,0.436725127492355,0.809186078308924,1.48776220305605,0.523511883968059,0.388844919875379,0.621339313086926,0,0,0,0,0,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0.288030006257865,0.316011120628178,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0.360586348559907,0,0.605798699688886,0.304827226619999,0.201652370273681,1.16949456887703,0.962118416403295,1.05189211963412,3.40095575422817,0,0,0,3.28422309854724,0.187682475451182,0,0.857473516316263,0,0.564751842617067,0.460325236507177,0.572895513439397,1.20297227640581,0.685082519770642,1.5107877947794,3.37511250115903,0.45032120322422,1.35942722695261,1.55328093525546,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.735374033800057,0.666740183404846,0,0,0.758091635291392,0.760437899670719,0.754505365544305,0.37456602987953,0.704276676453562,0.689225627467359,0,1.0429589335037,0.77163688185482,0,0.735994600671987,0,1.06485483695602,0.715308569841963,0,0.282328141245992,0.846146078916765,0.365855945745545,0.526139422875686,0.679020569229309,0,0.830445126869219,0.591026894253381,0.409231043169689,0.464810523557898,0.771626443924566,0.749431733813838,0.701794825336225,1.07435527024149,0,1.98532277207564,1.62307484934295 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|phase1_expression=1.12104192973356,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.0874204024189974,1.33243904726265,0.809901069559304,0,0.315462165358238,0.548457734422955,0.42438965179803,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0,0.202316460859598,0,0,0,0,0,0,0,1.49800055259202,0.768436610643109,0,0,0.210324961351382,1.71390590642282,0.883474163806454,0,0.0958454710182364,0,1.10115880999389,3.06449611404451,2.61131106535614,0,0.182975287204819,0.52091337055676,2.79182999001381,0.56276261003168,3.51435969886663,3.53554302568401,3.98640706237488,0,1.13589289999776,3.92972112555285,0,0,0,0,0,0.448026887097336,0.842666520790511,0,0,0,13.5209682985613,0,0,0,0,0,0,0.34255163915718,2.33044095282455,0,0.173485326766136,0.304465478312141,1.15307748628029,1.05505848386836,1.76383060703557,0.502666365318702,0,2.31358971071859,0,0.970601099684455,1.10420759230197,0,0,3.51336956413857,4.81727425670947,0.255457055208591,0,0,0,2.24685959107234,2.28750301409313,0.251308704225729,0.869121600961382,1.79000820131231,2.90903262383384,2.59586020908412,0.305518091550949,1.61729061793121,0,1.68353484709179,0,0,0.180062129805349,0.30140963567143,0.612328492361951,0.384341160854549,1.12442069471675,2.32833033665114,0,0,0,0,0.278047249225598,0.696504333044333,0.823128545631774,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.405344047729279,0.584799949701329,0.439100230582101,0.536825675041487,1.68231958851302,0.308713837137853,0,0.264450566663544,0,0,0.257734922644187,0,0.667134131534611,0,0,0.329397909448022,1.00534083520108,0.198956472041151,0.779856348476481,0,0.648414149624083,0.597423819763102,0,0,0,0,0,0.210407459670956,0.0632365371242573,0.295220295959204,0,0.123397163921801,0.889357881261447,0,0.196558995113203,0,0.405720242777006,0.72353147925725,0.25462585178142,0.287696137450811,0.486405680325106,1.37280706594041,0,0.744281895337007,0.936113019343682,0.252578877947112,0.179397413521912,0.482443521363367,0.554259570499814,0,0.488894929326078,0.169745085775188,0.469380496577004,0.167506257441816,0.714130922658041,0.585400943573396,0.472905432318573,0,0.478364305972461,2.13022309130459,1.55416483679306,1.59113964439663,0,0,0,0,4.49541651965817,4.21962071731931,0,1.76729649043061,1.26203287766503,0.390438744296638,5.60100834105277,5.4962823529087,7.12955757063661,9.34152551603147,2.02405350837447,2.63030272120181,2.76701444562566,6.10510501201433,0.425820255624806,0,0,0.494910368917606,0,0,0,0.377210159511796,0.295301892880773,0.922305443831782,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,0,1.02131881726136,0,0,0,0,0.356737635204141,0.822745103010605,0.304464949114599,0,0,1.32317038832977,1.48397627647332,0.968786560175433,0.663442174209714,1.19372344003136,1.47726809770555,0.582961673259701,6.67531087237835,3.93003025835061,0,0,0.753473828018764,1.77702496037333,2.51655990527175,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,0.108005340821801,0.418176592028937,0.436725127492355,0.809186078308924,1.48776220305605,0.523511883968059,0.388844919875379,0.621339313086926,0,0,0,0,0,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0.288030006257865,0.316011120628178,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0.360586348559907,0,0.605798699688886,0.304827226619999,0.201652370273681,1.16949456887703,0.962118416403295,1.05189211963412,3.40095575422817,0,0,0,3.28422309854724,0.187682475451182,0,0.857473516316263,0,0.564751842617067,0.460325236507177,0.572895513439397,1.20297227640581,0.685082519770642,1.5107877947794,3.37511250115903,0.45032120322422,1.35942722695261,1.55328093525546,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.735374033800057,0.666740183404846,0,0,0.758091635291392,0.760437899670719,0.754505365544305,0.37456602987953,0.704276676453562,0.689225627467359,0,1.0429589335037,0.77163688185482,0,0.735994600671987,0,1.06485483695602,0.715308569841963,0,0.282328141245992,0.846146078916765,0.365855945745545,0.526139422875686,0.679020569229309,0,0.830445126869219,0.591026894253381,0.409231043169689,0.464810523557898,0.771626443924566,0.749431733813838,0.701794825336225,1.07435527024149,0,1.98532277207564,1.62307484934295 | ||
|short_description=p@chr3:106903846..106903907,+ | |short_description=p@chr3:106903846..106903907,+ | ||
}} | }} |
Latest revision as of 19:56, 5 August 2015
Short description: | p@chr3:106903846..106903907, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:106903846..106903907, + |
Coexpression cluster: | MCL_coexpression_mm9:2357 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 8.73e-10 | 9 |
ectodermal cell | 8.64e-09 | 44 |
neurectodermal cell | 8.64e-09 | 44 |
neuron | 2.40e-08 | 33 |
neuronal stem cell | 2.40e-08 | 33 |
neuroblast | 2.40e-08 | 33 |
electrically signaling cell | 2.40e-08 | 33 |
neural cell | 6.30e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 4.12e-18 | 95 |
ectoderm | 4.12e-18 | 95 |
presumptive ectoderm | 4.12e-18 | 95 |
nervous system | 6.03e-16 | 75 |
central nervous system | 2.13e-14 | 73 |
peripheral nervous system | 9.24e-12 | 11 |
autonomic nervous system | 8.73e-10 | 9 |
ecto-epithelium | 1.62e-09 | 73 |
neurectoderm | 1.25e-07 | 64 |
neural plate | 1.25e-07 | 64 |
presumptive neural plate | 1.25e-07 | 64 |
regional part of nervous system | 1.99e-07 | 54 |
posterior neural tube | 3.13e-07 | 12 |
chordal neural plate | 3.13e-07 | 12 |