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FFCP PHASE1:Mm9::chr11:57981969..57982046,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=216766
|EntrezGene=216766
|HGNC=
|HGNC=
|MCL_coexpression_id=1067
|MCL_coexpression_id=1067
|TSSclassifier=NA
|UniProt=Q8BX17,A2AFQ9,E9PUU4,Q3TR97
|UniProt=Q8BX17,A2AFQ9,E9PUU4,Q3TR97
|association_with_transcript=0bp_to_ENSMUST00000035604,ENSMUST00000102711,ENSMUST00000172035,NM_001166669,NM_001166670,NM_001166671,NM_172558,uc007jal.2,uc007jan.2,uc007jao.2,uc011xvd.1,uc011xve.1_5end
|association_with_transcript=0bp_to_ENSMUST00000035604,ENSMUST00000102711,ENSMUST00000172035,NM_001166669,NM_001166670,NM_001166671,NM_172558,uc007jal.2,uc007jan.2,uc007jao.2,uc011xvd.1,uc011xve.1_5end
|cluster_id=chr11:57981969..57982046,-
|description=CAGE_peak_1_at_Gemin5_5end
|description=CAGE_peak_1_at_Gemin5_5end
|id=chr11:57981969..57982046,-
|id=chr11:57981969..57982046,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001048!2.15e-12!147;UBERON:0000949!1.76e-10!72;UBERON:0004177!2.79e-10!29;UBERON:0002323!2.80e-10!37;UBERON:0004458!2.80e-10!37;UBERON:0003886!7.30e-10!38;UBERON:0005057!1.53e-09!51;UBERON:0002553!4.20e-09!39;UBERON:0002370!7.82e-09!23;UBERON:0000974!7.82e-09!23;UBERON:0004807!7.82e-09!23;UBERON:0005058!7.82e-09!23;UBERON:0003351!7.82e-09!23;UBERON:0009113!7.82e-09!23;UBERON:0003295!7.82e-09!23;UBERON:0009722!7.82e-09!23;UBERON:0005562!7.82e-09!23;UBERON:0007690!7.82e-09!23;UBERON:0003408!6.85e-08!24;UBERON:0006562!8.15e-08!24;UBERON:0001557!8.15e-08!24;UBERON:0001042!8.15e-08!24;UBERON:0008814!8.15e-08!24;UBERON:0009145!8.15e-08!24;UBERON:0002368!8.34e-08!60;UBERON:0000926!3.38e-07!193;UBERON:0004120!3.38e-07!193;UBERON:0006603!3.38e-07!193;UBERON:0000991!4.03e-07!18;UBERON:0005564!4.03e-07!18;UBERON:0001041!4.10e-07!92
|ontology_enrichment_uberon=UBERON:0001048!2.15e-12!147;UBERON:0000949!1.76e-10!72;UBERON:0004177!2.79e-10!29;UBERON:0002323!2.80e-10!37;UBERON:0004458!2.80e-10!37;UBERON:0003886!7.30e-10!38;UBERON:0005057!1.53e-09!51;UBERON:0002553!4.20e-09!39;UBERON:0002370!7.82e-09!23;UBERON:0000974!7.82e-09!23;UBERON:0004807!7.82e-09!23;UBERON:0005058!7.82e-09!23;UBERON:0003351!7.82e-09!23;UBERON:0009113!7.82e-09!23;UBERON:0003295!7.82e-09!23;UBERON:0009722!7.82e-09!23;UBERON:0005562!7.82e-09!23;UBERON:0007690!7.82e-09!23;UBERON:0003408!6.85e-08!24;UBERON:0006562!8.15e-08!24;UBERON:0001557!8.15e-08!24;UBERON:0001042!8.15e-08!24;UBERON:0008814!8.15e-08!24;UBERON:0009145!8.15e-08!24;UBERON:0002368!8.34e-08!60;UBERON:0000926!3.38e-07!193;UBERON:0004120!3.38e-07!193;UBERON:0006603!3.38e-07!193;UBERON:0000991!4.03e-07!18;UBERON:0005564!4.03e-07!18;UBERON:0001041!4.10e-07!92
|ontology_enrichment_uberon_v019_2=UBERON:0000949,1.76e-10,72;UBERON:0004177,2.79e-10,29;UBERON:0005057,2.79e-10,29;UBERON:0002323,2.80e-10,37;UBERON:0004458,2.80e-10,37;UBERON:0003886,7.30e-10,38;UBERON:0001048,3.11e-09,134;UBERON:0002553,4.20e-09,39;UBERON:0002370,7.82e-09,23;UBERON:0000974,7.82e-09,23;UBERON:0004807,7.82e-09,23;UBERON:0005058,7.82e-09,23;UBERON:0003351,7.82e-09,23;UBERON:0009113,7.82e-09,23;UBERON:0003295,7.82e-09,23;UBERON:0009722,7.82e-09,23;UBERON:0005562,7.82e-09,23;UBERON:0007690,7.82e-09,23;UBERON:0000153,2.03e-08,43;UBERON:0000077,3.94e-08,35;UBERON:0003408,6.85e-08,24;UBERON:0006562,8.15e-08,24;UBERON:0001557,8.15e-08,24;UBERON:0001042,8.15e-08,24;UBERON:0008814,8.15e-08,24;UBERON:0009145,8.15e-08,24;UBERON:0002368,8.34e-08,60;UBERON:0000991,4.03e-07,18;UBERON:0005564,4.03e-07,18;UBERON:0007811,8.26e-07,36
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72580626,15.6816222010852,15.5037420259786,15.1048067950999,13.6378201946804,10.2084817373772,11.1468877030942,9.94142900939081,109.920123043417,28.258627202312,26.3078999826785,41.6125543056262,32.677435339866,28.3846290824507,23.9408766837338,30.4678260534843,52.8491095905583,63.2950396564136,75.4638616395607,27.1769563740233,30.4087822935246,27.6292474773385,27.9329769402259,33.477992089819,28.0140710241584,29.9286669304722,29.2425263805663,26.4532098864147,27.2820367824899,27.1222438018101,29.7246536256245,26.3620446094503,26.4141798930346,7.9355634265324,28.4142020318803,57.8654375131118,28.3725001655293,10.6254276717705,14.0761856588386,18.681465675261,20.1506276334322,14.5455910170255,18.0720589637461,16.1113832777512,14.3223878359849,17.5290245990561,13.0165678756422,12.0863023582352,8.77529250301348,11.7083512838297,11.3285602246051,16.0505696643064,35.3914855262042,29.1288157582753,21.5124343250209,18.9623239313269,23.476674214334,21.3258469802016,18.0019849519308,16.8948746935893,16.3668796891826,20.9738685763952,16.2226751929753,15.8446126764304,18.1664524491572,17.4148414541244,18.2070436589294,19.0517476513229,16.6873429360592,17.1689206212697,14.0109206273124,17.9582682563965,14.4005086001874,18.8124354528898,14.5446075867866,19.6217662453643,19.3865323655581,17.5998384414687,16.4635175585495,16.3103221091463,18.8767718245748,19.6399795080208,20.7611281717305,20.5874368164928,15.5507796404482,15.9584946421545,13.696369379661,19.7350356570977,15.439486157397,15.0409737833809,13.1988949127502,13.2354851471709,11.1296561097802
|phase1_expression=18.7374151112609,1.39590163055744,3.18499467572675,0.90739263392049,3.50627010962443,10.5763941304491,10.9797941079897,12.7832090207161,76.3074874062034,58.2820670541764,49.824428753622,45.3105863093511,19.0032810223638,17.3966600813805,24.650122374359,17.6153482629149,19.5877325875881,14.5112596064789,15.9052742982657,19.0975343309114,33.3369697392193,24.226992093016,16.7167865048919,7.03966660290989,5.50582274561208,3.44539178469012,5.1691439539089,4.30942465371778,4.75058548640935,12.0974462284767,6.87364583031445,35.5617177137393,46.7449238564273,0,21.9527231010969,28.0936550655852,26.542016314108,1.67412652294763,2.3440060335714,3.14114246384279,4.1176204162171,3.41522742479223,2.91306211818692,12.9673722514845,15.5106704765857,17.9875817118448,7.04152209913235,11.7733584445441,9.66619204031676,10.4992145500113,12.738764367908,20.125359011096,11.4092172119261,10.8804321301702,13.1076581665561,8.2323019531503,10.8882707176728,7.21940929188419,16.7922662513466,15.340738398889,11.4089652631112,12.5372476865579,9.78224275722253,4.94944844504769,3.9554654502679,3.5524005747305,3.89480143673926,4.61061966385865,16.7977171939734,17.5507719831198,18.5085965989216,14.568200204594,11.2642955885323,15.1888591026543,13.2266750005166,19.3035945188104,15.4162233399144,7.66124028511126,10.4452442614246,16.0901271030836,14.4550476891807,13.5437476344758,10.8881369610539,11.8180148106653,10.6958773443767,13.258286346315,14.6642831223076,16.4031512326265,15.2966910533032,14.2074533000757,18.8411917656091,9.46466264679525,5.439770669662,12.4131734076698,15.5946340187441,16.1289679355041,10.5333315098814,8.01022516116871,8.83272415649754,8.12681021373782,13.8026551381147,10.2661181931454,28.028576367731,14.2213340630666,17.3192832808971,12.92135313923,6.57181778519218,10.5049169341535,22.0097201100096,18.8521516612327,26.7167403219849,18.5723941770406,17.2961622942044,14.770818774157,17.6383060703557,15.9596570988688,11.3709685157812,13.3031408366319,14.153768831198,18.9267214438469,19.2132121060542,17.9403843660032,11.1835056730873,15.8101630386235,15.7085030110091,10.2182822083437,21.9261677845834,11.9980546198682,17.9169020173021,14.379901382863,19.2150253183823,21.4868942112998,16.6871347384585,12.2743419518559,16.2074674756457,14.7639549391659,17.5163705822544,16.4217201205323,14.1524744722858,10.3116509384372,25.3734863777272,20.4612872945791,20.5270827978098,19.1395118651358,19.1182562615231,20.1138540847214,20.052169055782,13.1938719076898,40.7423506643072,29.311442426012,25.5129130037726,22.3579647076126,20.8535436919198,17.7608604926305,16.2567887762275,29.855140022774,9.83098462238529,15.4408744268829,19.6072814582959,19.8840741634082,15.7132460187334,18.3663302690235,19.4130683179872,16.1346670032871,18.0492522078233,16.7424440220294,14.7550370769791,17.2812706703411,10.8609500942897,8.37254066803386,11.5117709555115,10.6725990820493,13.173006917463,11.6759584321523,17.2437757822584,17.5966887168576,4.62586296177317,11.3713743665324,37.7520203447364,29.0295839825548,25.3868898804524,14.117846723634,14.8993289376063,10.2721838100782,10.9141684155238,14.1641101062649,13.5721012752146,10.9426059622633,15.5971269695296,14.3811105384675,9.29393614461185,10.5544874824815,28.0708493410561,29.8188617911392,31.5581659884625,19.7541788009955,18.4254862809244,17.0430042333474,16.8209188750524,12.6944727262458,11.303908404579,10.488758933353,18.3800628794032,36.0385428346763,34.7909421350369,29.0072124976461,28.4004169943904,23.8765388154893,21.3885715496393,22.727994858614,17.8348749452539,15.9245619649087,18.6898668485561,17.8627654880882,19.6583734062173,16.4176270665623,13.8136008411872,13.9908621195376,11.8242041706627,26.7182890596384,26.5632911600502,29.3658998391075,22.5302638356962,14.9080569123216,13.0924002487308,13.8544889979037,14.817703545982,15.9454576547118,12.437471955284,12.7813385478276,8.63424909329478,10.2700831592873,3.01582567878545,8.70249094109935,13.769399644533,16.8321415245887,13.0045977890111,12.5416504653657,23.1148272981112,12.1186045058099,16.4064274096453,13.2749173060857,10.7711698866399,9.31978312014953,12.4767257486141,17.2676683781188,13.3587531552715,8.47541987942804,12.2539211163422,16.0660658210904,20.0135520143659,27.2440373610901,17.2660176914791,22.7658769702099,10.619611067197,26.463089340893,27.5114436837923,20.369348613637,27.1677741450311,21.213025208131,20.1574068671212,19.9943551212628,25.6678112436999,27.495197940416,27.4088382294997,21.6584640821192,13.9580238359053,24.3082476942269,21.2148241403717,19.2903331528433,12.2364761213169,18.1936193954112,13.9866667511803,14.9187825066154,14.54964589995,8.89694697628045,14.5548742716275,11.8718102117866,11.7869031488011,19.360448901938,14.6827983123858,17.2347944732314,12.2421951384537,12.0526446306831,22.042343622923,23.1153292118809,26.2976228864991,21.8507410125442,23.5114071680163,18.5310320297283,11.728511669576,13.1554365184239,11.1941978781583,3.81868247206045,28.6284074190927,21.1452245811923,18.1448972580626,15.6816222010852,15.5037420259786,15.1048067950999,13.6378201946804,10.2084817373772,11.1468877030942,9.94142900939081,109.920123043417,28.258627202312,26.3078999826785,41.6125543056262,32.677435339866,28.3846290824507,23.9408766837338,30.4678260534843,52.8491095905583,63.2950396564136,75.4638616395607,27.1769563740233,30.4087822935246,27.6292474773385,27.9329769402259,33.477992089819,28.0140710241584,29.9286669304722,29.2425263805663,26.4532098864147,27.2820367824899,27.1222438018101,29.7246536256245,26.3620446094503,26.4141798930346,7.9355634265324,28.4142020318803,57.8654375131118,28.3725001655293,10.6254276717705,14.0761856588386,18.681465675261,20.1506276334322,14.5455910170255,18.0720589637461,16.1113832777512,14.3223878359849,17.5290245990561,13.0165678756422,12.0863023582352,8.77529250301348,11.7083512838297,11.3285602246051,16.0505696643064,35.3914855262042,29.1288157582753,21.5124343250209,18.9623239313269,23.476674214334,21.3258469802016,18.0019849519308,16.8948746935893,16.3668796891826,20.9738685763952,16.2226751929753,15.8446126764304,18.1664524491572,17.4148414541244,18.2070436589294,19.0517476513229,16.6873429360592,17.1689206212697,14.0109206273124,17.9582682563965,14.4005086001874,18.8124354528898,14.5446075867866,19.6217662453643,19.3865323655581,17.5998384414687,16.4635175585495,16.3103221091463,18.8767718245748,19.6399795080208,20.7611281717305,20.5874368164928,15.5507796404482,15.9584946421545,13.696369379661,19.7350356570977,15.439486157397,15.0409737833809,13.1988949127502,13.2354851471709,11.1296561097802
|short_description=p1@Gemin5
|short_description=p1@Gemin5
}}
}}

Latest revision as of 18:28, 1 October 2015

Short description:p1@Gemin5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gemin5_5end
Coexpression cluster:MCL_coexpression_mm9:1067
Association with transcript: 0bp_to_ENSMUST00000035604, ENSMUST00000102711, ENSMUST00000172035, NM_001166669, NM_001166670, NM_001166671, NM_172558, uc007jal.2, uc007jan.2, uc007jao.2, uc011xvd.1, uc011xve.1_5end
EntrezGene:Gemin5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gemin5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G718.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I710.58
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.98
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E912.78
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E776.31
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F258.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E649.82
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F145.31
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E419.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E817.40
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A124.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A317.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A519.59
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A214.51
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A415.91
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A619.10
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A333.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H224.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I916.72
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.51
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I15.17
GP2+ M cell, pool3.CNhs13240.11847-124I24.31
Ileum epithelium, pool1.CNhs13199.10252-104B94.75
Ileum epithelium, pool2.CNhs13232.10253-104C112.10
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.87
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I335.56
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G646.74
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F521.95
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F628.09
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F726.54
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D812.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D915.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B317.99
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C211.77
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.67
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C412.74
Mouse Astrocytes, donor3.CNhs12107.11633-122C420.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A211.41
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.88
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A113.11
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C18.23
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.89
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.22
Mouse Granule cells, donor1.CNhs12131.11713-123C316.79
Mouse Granule cells, donor2.CNhs12357.11731-123E315.34
Mouse Granule cells, donor3.CNhs12108.11636-122C711.41
Mouse Meningeal cells, donor1.CNhs12132.11716-123C612.54
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D516.80
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F517.55
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D918.51
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.26
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D215.19
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F213.23
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D619.30
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D416.09
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.54
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.89
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.70
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.26
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.66
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.40
Mouse Schwann, donor1.CNhs12507.11728-123D915.30
Mouse Schwann, donor2.CNhs12573.11746-123F914.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G318.84
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C812.41
Mouse hepatocyte, donor6.CNhs13090.11822-124F415.59
Mouse hepatocyte, donor8.CNhs13091.11824-124F616.13
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.13
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G613.80
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I828.03
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G117.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G212.92
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.57
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.50
accessory axillary lymph node, adult.CNhs10475.1063-29H922.01
adrenal gland, adult.CNhs10508.49-24D718.85
adrenal gland, embryo E14.CNhs11038.406-44C526.72
adrenal gland, embryo E16.CNhs11004.1254-43D618.57
adrenal gland, embryo E17.CNhs11043.1263-45I117.30
adrenal gland, embryo E18.CNhs11026.1262-18F514.77
adrenal gland, neonate N00.CNhs11191.1311-23C117.64
adrenal gland, neonate N25.CNhs11223.1377-27I315.96
amnion, adult pregnant day17.5.CNhs10488.583-22A811.37
aorta, adult.CNhs10498.46-23H113.30
bone (os femoris), adult.CNhs10483.56-12G214.15
bone (os femoris), neonate N02.CNhs11227.1985-43F518.93
bone (os femoris), neonate N16.CNhs11225.1525-43A619.21
bone (os femoris), neonate N20.CNhs11195.1350-25C317.94
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B215.81
cerebellum, neonate N30.CNhs11135.1395-42I215.71
colon, adult.CNhs10468.36-18H710.22
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C721.93
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D112.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D417.92
corpora quadrigemina, adult.CNhs10501.16-22A414.38
corpus striatum, adult.CNhs10487.19-21D819.22
corpus striatum, neonate N00.CNhs11226.630-43F121.49
cortex, adult.CNhs10473.12-14D516.69
cortex, neonate N30.CNhs11107.1392-42F212.27
diencephalon, adult.CNhs10482.20-12F216.21
diencephalon, neonate N30.CNhs11201.1388-42B214.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B117.52
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A216.42
epididymis, adult.CNhs10490.58-23B214.15
eyeball, adult.CNhs10484.31-12G410.31
eyeball, embryo E12.CNhs11016.345-16C625.37
eyeball, embryo E14.CNhs10521.399-16E220.46
eyeball, embryo E15.CNhs10593.426-16C920.53
eyeball, embryo E17.CNhs11023.1261-18D419.14
eyeball, neonate N00.CNhs11207.633-15C619.12
eyeball, neonate N01.CNhs11140.1532-43E720.11
eyeball, neonate N02.CNhs11205.1551-44G820.05
eyeball, neonate N16.CNhs11188.777-19A213.19
forelimb, embryo E11.CNhs10596.335-25E240.74
forelimb, embryo E12.CNhs10600.359-14H229.31
forelimb, embryo E13.CNhs10589.384-1E225.51
forelimb, embryo E14.CNhs10577.413-26A822.36
forelimb, embryo E15.CNhs11007.437-20E720.85
forelimb, embryo E17.CNhs10598.1517-43C417.76
forelimb, embryo E18.CNhs11008.1520-43B516.26
gonad, embryo E13.CNhs11044.1564-45I629.86
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C89.83
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D215.44
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D519.61
heart, embryo E11.CNhs10586.331-24E919.88
heart, embryo E12.CNhs11015.353-12F515.71
heart, embryo E13.CNhs11013.376-3I918.37
heart, embryo E14.CNhs10597.403-26D419.41
heart, embryo E15.CNhs11017.431-16C816.13
heart, embryo E16.CNhs11021.457-17C618.05
heart, embryo E17.CNhs11025.479-18E516.74
heart, embryo E18.CNhs11030.1283-20G314.76
heart, neonate N00.CNhs11213.639-21E317.28
heart, neonate N03.CNhs11221.1349-25I210.86
heart, neonate N10.CNhs11118.749-24G18.37
heart, neonate N16.CNhs11209.782-15G111.51
heart, neonate N20.CNhs11127.821-26I610.67
heart, neonate N25.CNhs11196.1351-25D313.17
heart, neonate N30.CNhs11202.1390-42D211.68
hippocampus, adult.CNhs10478.13-16E817.24
hippocampus, neonate N00.CNhs11228.627-43G117.60
intestinal mucosa, adult.CNhs10506.860-29I34.63
intestine, adult.CNhs10496.178-9A311.37
intestine, embryo E12.CNhs11019.1251-16I537.75
intestine, embryo E13.CNhs11010.381-16D529.03
intestine, embryo E15.CNhs10602.976-16D825.39
intestine, embryo E16.CNhs10585.463-22H414.12
intestine, embryo E17.CNhs10582.482-18D314.90
intestine, embryo E18.CNhs10526.1289-20F710.27
intestine, neonate N00.CNhs11126.644-26D110.91
intestine, neonate N01.CNhs11192.1322-23E914.16
intestine, neonate N06.CNhs11102.688-20B813.57
intestine, neonate N07.CNhs11095.720-20F210.94
intestine, neonate N10.CNhs11098.755-23A515.60
intestine, neonate N20.CNhs11187.827-18D114.38
intestine, neonate N25.CNhs11121.1352-25E39.29
intestine, neonate N30.CNhs11131.1384-42G110.55
kidney, embryo E14.CNhs10606.411-4I928.07
kidney, embryo E15.CNhs10997.434-16F829.82
kidney, embryo E16.CNhs10584.464-22A531.56
kidney, embryo E17.CNhs11028.483-18I219.75
kidney, embryo E18.CNhs11001.1288-20C718.43
kidney, neonate N00.CNhs11214.646-21G717.04
kidney, neonate N10.CNhs11206.758-6D516.82
kidney, neonate N20.CNhs11113.832-19I112.69
kidney, neonate N25.CNhs11122.1353-25F311.30
kidney, neonate N30.CNhs11203.1385-42H110.49
liver, adult pregnant day01.CNhs10466.508-5B218.38
liver, embryo E12.CNhs10601.355-15F836.04
liver, embryo E13.CNhs10524.378-3H634.79
liver, embryo E14.CNhs10594.409-16E129.01
liver, embryo E15.CNhs10520.433-16D728.40
liver, embryo E16.CNhs10523.462-17F523.88
liver, embryo E17.CNhs10510.481-18A321.39
liver, embryo E18.CNhs10579.499-43G422.73
liver, neonate N00.CNhs11117.641-24F417.83
liver, neonate N03.CNhs11123.1345-25G215.92
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H217.86
liver, neonate N10.CNhs11115.751-24B919.66
liver, neonate N20.CNhs11220.823-25A316.42
liver, neonate N25.CNhs11198.1368-26H113.81
liver, neonate N30.CNhs11106.1382-42D113.99
lung, adult.CNhs10474.28-22B111.82
lung, embryo E12.CNhs10522.354-16G226.72
lung, embryo E14.CNhs10604.404-26F826.56
lung, embryo E15.CNhs11020.432-17C529.37
lung, embryo E16.CNhs10998.458-17B622.53
lung, embryo E17.CNhs10605.480-44A614.91
lung, embryo E18.CNhs10583.1287-20I613.09
lung, neonate N00.CNhs11224.640-42C613.85
lung, neonate N06.CNhs11212.683-20E514.82
lung, neonate N07.CNhs11111.715-19A315.95
lung, neonate N10.CNhs11219.750-23E612.44
lung, neonate N20.CNhs11109.822-18A412.78
lung, neonate N25.CNhs11119.1359-25C78.63
lung, neonate N30.CNhs11133.1394-42H210.27
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.70
mammary gland, adult lactating day02.CNhs10480.595-22B613.77
mammary gland, adult pregnant day19.CNhs10476.588-5H216.83
medulla oblongata, adult.CNhs10477.17-12C213.00
medulla oblongata, neonate N30.CNhs11200.1396-42A312.54
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C723.11
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C212.12
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E116.41
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.27
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.77
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D79.32
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.48
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D917.27
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D413.36
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.48
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D612.25
olfactory brain, adult.CNhs10489.18-22I916.07
ovary, adult.CNhs10507.91-2I720.01
ovary, embryo E18.CNhs11040.505-44H727.24
ovary, neonate N00.CNhs11217.1299-22I417.27
oviduct, adult pregnant day01.CNhs10500.988-6G622.77
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F426.46
pancreas, embryo E15.CNhs11042.1556-45F227.51
pancreas, embryo E16.CNhs11003.460-26E520.37
pancreas, embryo E17.CNhs10599.1558-45G327.17
pancreas, embryo E18.CNhs10580.1535-43I721.21
pancreas, neonate N00.CNhs11105.645-26G920.16
pancreas, neonate N01.CNhs11138.1531-43D719.99
pancreas, neonate N02.CNhs11139.1539-43D825.67
pancreas, neonate N16.CNhs11136.787-43B627.50
pancreas, neonate N25.CNhs11094.1555-45E227.41
pancreas, neonate N30.CNhs11182.1548-44H521.66
pituitary gland, adult.CNhs10493.21-1G813.96
pituitary gland, embryo E12.CNhs11018.346-16E624.31
pituitary gland, embryo E13.CNhs11009.370-44C721.21
pituitary gland, embryo E14.CNhs11037.398-44A519.29
pituitary gland, embryo E15.CNhs10592.427-16B912.24
pituitary gland, embryo E16.CNhs11036.449-43F618.19
pituitary gland, embryo E17.CNhs11039.1265-44F513.99
pituitary gland, neonate N00.CNhs11190.1308-22E914.92
placenta, adult pregnant day10.CNhs10472.539-13I714.55
placenta, adult pregnant day17.CNhs10464.577-18G38.90
prostate, adult.CNhs10470.859-1F814.55
skin, adult.CNhs10492.30-1C311.87
skin, neonate N00.CNhs11124.650-25G411.79
skin, neonate N03.CNhs11215.662-22H319.36
skin, neonate N06.CNhs11097.693-20I514.68
skin, neonate N10.CNhs11108.762-6C417.23
small intestine, neonate N16.CNhs11114.790-21I112.24
spinal cord, adult.CNhs10505.24-13C912.05
spleen, adult.CNhs10465.25-2G222.04
spleen, embryo E16.CNhs11035.461-43C123.12
spleen, embryo E18.CNhs11011.1271-21F226.30
spleen, neonate N10.CNhs11116.752-24D121.85
spleen, neonate N20.CNhs11112.824-19H123.51
spleen, neonate N25.CNhs11099.1354-25G318.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C611.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C913.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D311.19
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E328.63
stomach, embryo E15.CNhs10603.1252-16G821.15
stomach, embryo E16.CNhs11022.459-17D418.14
stomach, embryo E17.CNhs11006.1035-18D515.68
stomach, embryo E18.CNhs10999.1286-20C615.50
stomach, neonate N03.CNhs11193.1340-24B815.10
stomach, neonate N07.CNhs11210.718-18A913.64
stomach, neonate N25.CNhs11104.1355-25E410.21
stomach, neonate N30.CNhs11134.1386-42I111.15
submandibular gland, adult.CNhs10469.59-29C19.94
testis, adult.CNhs10504.57-7G5109.92
testis, embryo E13.CNhs11031.389-23F528.26
testis, embryo E15.CNhs11034.443-27C526.31
testis, embryo E16.CNhs11033.470-26G541.61
testis, embryo E17.CNhs11029.486-18I532.68
testis, embryo E18.CNhs11027.503-18G528.38
testis, neonate N00.CNhs11189.1300-22B723.94
testis, neonate N07.CNhs11222.726-26I430.47
testis, neonate N10.CNhs11204.763-44D952.85
testis, neonate N20.CNhs11110.839-18H363.30
testis, neonate N30.CNhs11130.1391-42E275.46
thymus, adult.CNhs10471.38-12B527.18
thymus, embryo E14.CNhs11041.402-44I430.41
thymus, embryo E15.CNhs11005.430-45I227.63
thymus, embryo E16.CNhs11002.456-26C527.93
thymus, embryo E17.CNhs10581.478-18C133.48
thymus, embryo E18.CNhs10595.1273-19G428.01
thymus, neonate N02.CNhs11181.1541-43F829.93
thymus, neonate N03.CNhs11137.2104-43C729.24
thymus, neonate N06.CNhs11197.681-26C426.45
thymus, neonate N07.CNhs11211.713-19D327.28
thymus, neonate N10.CNhs11194.748-24E427.12
thymus, neonate N20.CNhs11186.820-7A229.72
thymus, neonate N25.CNhs11125.1362-25G726.36
thymus, neonate N30.CNhs11132.1393-42G226.41
tongue, adult.CNhs10499.32-1B47.94
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H328.41
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F757.87
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G528.37
urinary bladder, adult.CNhs10481.879-12E410.63
uterus, adult pregnant day19.CNhs10497.590-15F514.08
uterus, adult.CNhs10509.92-27E518.68
vagina, adult.CNhs10502.89-27D520.15
vesicular gland, adult.CNhs10491.51-27F814.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A118.07
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.11
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.32
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D717.53
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.33
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A916.05
whole body, embryo E11.CNhs11014.324-5I835.39
whole body, embryo E12.CNhs10587.857-27C929.13
whole body, embryo E13.CNhs10512.372-23H221.51
whole body, embryo E14.5.CNhs10578.420-27D218.96
whole body, embryo E14.CNhs10519.395-14B123.48
whole body, embryo E16.CNhs10514.453-14F221.33
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G518.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.89
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G516.37
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G520.97
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.22
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.84
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G518.17
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G517.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G518.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G519.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G516.69
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G517.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G514.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G517.96
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G518.81
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.54
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G519.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G519.39
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.60
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G516.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G516.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G518.88
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G519.64
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G520.76
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G520.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.96
whole body, embryo E17.5.CNhs10513.490-9F913.70
whole body, embryo E17.CNhs10517.475-3I519.74
whole body, embryo E18.CNhs10516.493-3B315.44
whole body, neonate N00.CNhs10525.657-19C215.04
whole body, neonate N01.CNhs10576.659-23C613.20
whole body, neonate N06.CNhs10515.692-21D113.24
whole body, neonate N10.CNhs10518.761-6B411.13





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endocrine system1.76e-1072
hemopoietic organ2.79e-1029
immune organ2.79e-1029
body cavity2.80e-1037
body cavity or lining2.80e-1037
body cavity precursor7.30e-1038
primordium3.11e-09134
anatomical cavity4.20e-0939
thymus7.82e-0923
neck7.82e-0923
respiratory system epithelium7.82e-0923
hemolymphoid system gland7.82e-0923
pharyngeal epithelium7.82e-0923
thymic region7.82e-0923
pharyngeal gland7.82e-0923
entire pharyngeal arch endoderm7.82e-0923
thymus primordium7.82e-0923
early pharyngeal endoderm7.82e-0923
anterior region of body2.03e-0843
mixed endoderm/mesoderm-derived structure3.94e-0835
gland of gut6.85e-0824
pharynx8.15e-0824
upper respiratory tract8.15e-0824
chordate pharynx8.15e-0824
pharyngeal arch system8.15e-0824
pharyngeal region of foregut8.15e-0824
endocrine gland8.34e-0860
gonad4.03e-0718
gonad primordium4.03e-0718
craniocervical region8.26e-0736
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