FFCP PHASE1:Hg19::chr2:64327625..64327636,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:64327625..64327636,-
|short_description=p4@PELI1
|description=CAGE_peak_4_at_PELI1_5end
|association_with_transcript=-20bp_to_AK027668_5end
|EntrezGene=57...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57162 | |EntrezGene=57162 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8827 | |HGNC=8827 | ||
|TSSclassifier=strong | |||
|UniProt=Q96FA3 | |UniProt=Q96FA3 | ||
|association_with_transcript=-20bp_to_AK027668_5end | |||
|cluster_id=chr2:64327625..64327636,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_4_at_PELI1_5end | |||
|id=chr2:64327625..64327636,- | |||
|ontology_enrichment_celltype=CL:0002057!1.17e-36!42;CL:0000766!9.82e-34!76;CL:0000738!1.59e-33!140;CL:0000860!2.13e-33!45;CL:0002087!2.97e-28!119;CL:0000839!2.17e-26!70;CL:0002194!3.99e-26!63;CL:0000576!3.99e-26!63;CL:0000040!3.99e-26!63;CL:0000559!3.99e-26!63;CL:0002031!6.45e-26!124;CL:0000557!7.84e-26!71;CL:0002009!6.08e-25!65;CL:0000037!2.27e-23!172;CL:0000566!2.27e-23!172;CL:0002032!4.85e-22!165;CL:0000837!4.85e-22!165;CL:0000988!8.55e-22!182;CL:0000763!4.65e-19!112;CL:0000049!4.65e-19!112;CL:0002393!3.08e-10!9;CL:0002397!3.08e-10!9;CL:0000094!7.72e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000094;1.74e-31;8!CL:0000775;4.90e-31;3!CL:0000081;6.61e-23;11!CL:0000771;4.03e-21;2!CL:0000860;3.05e-20;33!CL:0002057;3.05e-20;33!CL:0000473;1.73e-14;39!CL:0000234;1.73e-14;39!CL:0000576;3.18e-12;48!CL:0000766;1.22e-10;69!CL:0000738;7.10e-10;136!CL:0002087;1.63e-08;104!CL:0000763;1.84e-08;100!CL:0000236;2.01e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.59e-31,8;CL:0000775,4.01e-31,3;CL:0000766,1.37e-28,72;CL:0000738,1.66e-26,136;CL:0000081,6.18e-23,11;CL:0000860,2.45e-22,42;CL:0002057,2.45e-22,42;CL:0002032,5.08e-22,161;CL:0000837,5.08e-22,161;CL:0000771,4.25e-21,2;CL:0000037,5.31e-21,168;CL:0000988,8.29e-20,177;CL:0000473,2.25e-19,48;CL:0000234,2.25e-19,48;CL:0000763,2.07e-18,108;CL:0000049,2.07e-18,108;CL:0002087,5.74e-17,115;CL:0002031,3.59e-16,120;CL:0002194,3.19e-15,59;CL:0000576,3.19e-15,59;CL:0000040,3.19e-15,59;CL:0000559,3.19e-15,59;CL:0002009,1.10e-14,61;CL:0000839,1.74e-13,66;CL:0000557,2.88e-13,67;CL:0000134,1.48e-08,354;CL:0002320,2.47e-08,361;CL:0000219,1.49e-07,386;CL:0000236,6.17e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;2.10e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.54e-24!102;UBERON:0003061!4.54e-24!102;UBERON:0002193!1.34e-21!112;UBERON:0002371!1.85e-21!80;UBERON:0001474!2.90e-21!86;UBERON:0004765!3.67e-16!101;UBERON:0001434!3.67e-16!101;UBERON:0002405!4.70e-15!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.50e-11,76;UBERON:0001474,1.30e-10,82;UBERON:0004765,1.49e-09,90;UBERON:0002405,3.35e-09,93;UBERON:0002390,1.16e-08,98;UBERON:0003061,1.16e-08,98;UBERON:0001434,1.83e-08,100;UBERON:0002384,4.95e-08,371;UBERON:0002193,9.78e-08,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,0,0.383829398097213,0,0,0,0.369754010166788,0,0,0,2.21598163412751,0.802177789880567,0.434021741431704,0.447830948479849,0,0.257575567634187,0.436194716338694,0,0.485168122375632,0.232429036905685,0,0.309706370895104,0,0.512321413058201,0.945928919554341,0,0.645484683583826,1.35426486594342,0.376484679085209,0.272906150057846,0.224723484445085,0.306083892370903,0,1.27867425159808,0.329851300186716,0.398927315243264,0.426224750532694,7.2552309657146,1.13477044938228,1.86846674698672,0.502497330513487,2.08593167368081,0.65156653411535,3.02699751316684,1.84138817993782,3.16462387440884,0.422510572623884,0.212604299965044,0.209658645508376,0,0.150176892841506,0,0.285012743741249,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,1.1384259382189,1.76171156811282,2.29363936875137,0,0.560508562981536,0,0,1.57204305099666,0.822405995998037,0,0,0,0,0,0.294605907474837,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,1.31780417436063,7.75560528296651,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0.637938751653163,4.49404214368309,14.9580729602012,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0.184161977871793,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0.251932747854276,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0.173624994933292,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0,0.321506296930038,0.275078873194468,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0.206686796501184,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0.230467975111559,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0.436350690340377,0,0,0,0,0.126166424835079,0,0.380095503034311,0,0,0,0,0,0,0,0,0.213233981900981,0,0.129177819672012,0.124149428591716,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,0,0.383829398097213,0,0,0,0.369754010166788,0,0,0,2.21598163412751,0.802177789880567,0.434021741431704,0.447830948479849,0,0.257575567634187,0.436194716338694,0,0.485168122375632,0.232429036905685,0,0.309706370895104,0,0.512321413058201,0.945928919554341,0,0.645484683583826,1.35426486594342,0.376484679085209,0.272906150057846,0.224723484445085,0.306083892370903,0,1.27867425159808,0.329851300186716,0.398927315243264,0.426224750532694,7.2552309657146,1.13477044938228,1.86846674698672,0.502497330513487,2.08593167368081,0.65156653411535,3.02699751316684,1.84138817993782,3.16462387440884,0.422510572623884,0.212604299965044,0.209658645508376,0,0.150176892841506,0,0.285012743741249,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,1.1384259382189,1.76171156811282,2.29363936875137,0,0.560508562981536,0,0,1.57204305099666,0.822405995998037,0,0,0,0,0,0.294605907474837,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,1.31780417436063,7.75560528296651,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0.637938751653163,4.49404214368309,14.9580729602012,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0.184161977871793,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0.251932747854276,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0.173624994933292,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0,0.321506296930038,0.275078873194468,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0.206686796501184,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0.230467975111559,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0.436350690340377,0,0,0,0,0.126166424835079,0,0.380095503034311,0,0,0,0,0,0,0,0,0.213233981900981,0,0.129177819672012,0.124149428591716,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@PELI1 | |||
}} | }} |
Latest revision as of 23:02, 17 September 2015
Short description: | p4@PELI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PELI1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -20bp_to_AK027668_5end |
EntrezGene: | PELI1 |
HGNC: | 8827 |
UniProt: | Q96FA3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.59e-31 | 8 |
neutrophil | 4.01e-31 | 3 |
myeloid leukocyte | 1.37e-28 | 72 |
leukocyte | 1.66e-26 | 136 |
blood cell | 6.18e-23 | 11 |
classical monocyte | 2.45e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.45e-22 | 42 |
hematopoietic oligopotent progenitor cell | 5.08e-22 | 161 |
hematopoietic multipotent progenitor cell | 5.08e-22 | 161 |
eosinophil | 4.25e-21 | 2 |
hematopoietic stem cell | 5.31e-21 | 168 |
hematopoietic cell | 8.29e-20 | 177 |
defensive cell | 2.25e-19 | 48 |
phagocyte | 2.25e-19 | 48 |
myeloid cell | 2.07e-18 | 108 |
common myeloid progenitor | 2.07e-18 | 108 |
nongranular leukocyte | 5.74e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 3.59e-16 | 120 |
monopoietic cell | 3.19e-15 | 59 |
monocyte | 3.19e-15 | 59 |
monoblast | 3.19e-15 | 59 |
promonocyte | 3.19e-15 | 59 |
macrophage dendritic cell progenitor | 1.10e-14 | 61 |
myeloid lineage restricted progenitor cell | 1.74e-13 | 66 |
granulocyte monocyte progenitor cell | 2.88e-13 | 67 |
mesenchymal cell | 1.48e-08 | 354 |
connective tissue cell | 2.47e-08 | 361 |
motile cell | 1.49e-07 | 386 |
B cell | 6.17e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.50e-11 | 76 |
bone element | 1.30e-10 | 82 |
skeletal element | 1.49e-09 | 90 |
immune system | 3.35e-09 | 93 |
hematopoietic system | 1.16e-08 | 98 |
blood island | 1.16e-08 | 98 |
skeletal system | 1.83e-08 | 100 |
connective tissue | 4.95e-08 | 371 |
hemolymphoid system | 9.78e-08 | 108 |