FFCP PHASE1:Hg19::chr2:70142232..70142251,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:70142232..70142251,+
|short_description=p1@MXD1
|description=CAGE_peak_1_at_MXD1_5end
|association_with_transcript=0bp_to_ENST00000409442_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4084 | |EntrezGene=4084 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6761 | |HGNC=6761 | ||
|TSSclassifier=strong | |||
|UniProt=F8WBI0 | |UniProt=F8WBI0 | ||
|association_with_transcript=0bp_to_ENST00000409442_5end | |||
|cluster_id=chr2:70142232..70142251,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_MXD1_5end | |||
|id=chr2:70142232..70142251,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.64e-29!76;CL:0000763!6.03e-29!112;CL:0000049!6.03e-29!112;CL:0002057!1.84e-26!42;CL:0000557!6.56e-26!71;CL:0002009!7.19e-26!65;CL:0000860!9.11e-26!45;CL:0000037!1.39e-25!172;CL:0000566!1.39e-25!172;CL:0000738!8.53e-25!140;CL:0002194!9.01e-25!63;CL:0000576!9.01e-25!63;CL:0000040!9.01e-25!63;CL:0000559!9.01e-25!63;CL:0000839!2.64e-24!70;CL:0002032!4.16e-23!165;CL:0000837!4.16e-23!165;CL:0000988!1.49e-21!182;CL:0002031!3.55e-18!124;CL:0002087!6.19e-18!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.09e-20;33!CL:0002057;5.09e-20;33!CL:0000473;3.94e-19;39!CL:0000234;3.94e-19;39!CL:0000576;1.85e-15;48!CL:0000766;2.25e-13;69!CL:0000763;9.08e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.89e-31,72;CL:0000763,7.49e-30,108;CL:0000049,7.49e-30,108;CL:0000473,2.45e-29,48;CL:0000234,2.45e-29,48;CL:0002009,1.91e-27,61;CL:0000557,2.39e-27,67;CL:0000860,1.46e-26,42;CL:0002057,1.46e-26,42;CL:0002194,2.51e-26,59;CL:0000576,2.51e-26,59;CL:0000040,2.51e-26,59;CL:0000559,2.51e-26,59;CL:0000037,4.08e-26,168;CL:0000839,1.14e-25,66;CL:0000738,1.60e-25,136;CL:0002032,1.31e-23,161;CL:0000837,1.31e-23,161;CL:0000988,2.07e-22,177;CL:0002031,8.91e-19,120;CL:0002087,1.50e-18,115 | |||
|ontology_enrichment_development_v019=CL:0002057;2.30e-19;42!CL:0000049;7.29e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.84e-28!102;UBERON:0003061!2.84e-28!102;UBERON:0002193!1.55e-25!112;UBERON:0002371!4.40e-21!80;UBERON:0001474!8.86e-20!86;UBERON:0002405!1.32e-17!115;UBERON:0004765!5.38e-13!101;UBERON:0001434!5.38e-13!101;UBERON:0003081!6.42e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.53e-29,98;UBERON:0003061,2.53e-29,98;UBERON:0002193,2.18e-26,108;UBERON:0002371,4.46e-22,76;UBERON:0002405,6.31e-21,93;UBERON:0001474,1.22e-20,82;UBERON:0004765,3.97e-17,90;UBERON:0001434,1.09e-11,100;UBERON:0003081,9.05e-09,203 | |||
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| ||
|short_description=p1@MXD1 | |||
}} | }} |
Latest revision as of 04:55, 18 September 2015
Short description: | p1@MXD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MXD1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000409442_5end |
EntrezGene: | MXD1 |
HGNC: | 6761 |
UniProt: | F8WBI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.89e-31 | 72 |
myeloid cell | 7.49e-30 | 108 |
common myeloid progenitor | 7.49e-30 | 108 |
defensive cell | 2.45e-29 | 48 |
phagocyte | 2.45e-29 | 48 |
macrophage dendritic cell progenitor | 1.91e-27 | 61 |
granulocyte monocyte progenitor cell | 2.39e-27 | 67 |
classical monocyte | 1.46e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.46e-26 | 42 |
monopoietic cell | 2.51e-26 | 59 |
monocyte | 2.51e-26 | 59 |
monoblast | 2.51e-26 | 59 |
promonocyte | 2.51e-26 | 59 |
hematopoietic stem cell | 4.08e-26 | 168 |
myeloid lineage restricted progenitor cell | 1.14e-25 | 66 |
leukocyte | 1.60e-25 | 136 |
hematopoietic oligopotent progenitor cell | 1.31e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.31e-23 | 161 |
hematopoietic cell | 2.07e-22 | 177 |
hematopoietic lineage restricted progenitor cell | 8.91e-19 | 120 |
nongranular leukocyte | 1.50e-18 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.53e-29 | 98 |
blood island | 2.53e-29 | 98 |
hemolymphoid system | 2.18e-26 | 108 |
bone marrow | 4.46e-22 | 76 |
immune system | 6.31e-21 | 93 |
bone element | 1.22e-20 | 82 |
skeletal element | 3.97e-17 | 90 |
skeletal system | 1.09e-11 | 100 |
lateral plate mesoderm | 9.05e-09 | 203 |