FFCP PHASE1:Hg19::chr2:99122586..99122606,-: Difference between revisions
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|id=chr2:99122586..99122606,-
|short_description=p@chr2:99122586..99122606,-
|description=CAGE_peak_at_chr2:99122586..99122606,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:99122586..99122606,- | |||
|coexpression_cluster_id=C82 | |||
|description=CAGE_peak_at_chr2:99122586..99122606,- | |||
|id=chr2:99122586..99122606,- | |||
|ontology_enrichment_celltype=CL:0002057!1.70e-115!42;CL:0000860!3.94e-107!45;CL:0000766!8.48e-81!76;CL:0002194!2.94e-76!63;CL:0000576!2.94e-76!63;CL:0000040!2.94e-76!63;CL:0000559!2.94e-76!63;CL:0002009!1.22e-73!65;CL:0000839!9.73e-68!70;CL:0000557!1.17e-66!71;CL:0000738!1.54e-54!140;CL:0000763!4.37e-54!112;CL:0000049!4.37e-54!112;CL:0002087!7.75e-52!119;CL:0000037!3.47e-44!172;CL:0000566!3.47e-44!172;CL:0002031!2.71e-42!124;CL:0000988!4.00e-41!182;CL:0002032!1.89e-40!165;CL:0000837!1.89e-40!165;CL:0002393!5.14e-30!9;CL:0002397!5.14e-30!9;CL:0000134!4.11e-15!358;CL:0002320!1.36e-14!365;CL:0000219!1.46e-13!390;CL:0000767!4.47e-12!3;CL:0000094!2.20e-11!8;CL:0000048!2.32e-11!430;CL:0000875!3.41e-11!3;CL:0002396!3.41e-11!3;CL:0000723!4.87e-11!436;CL:0000842!1.11e-10!3;CL:0000034!1.27e-10!444;CL:0000081!3.66e-08!11;CL:0000224!4.12e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000767;4.09e-33;3!CL:0000860;4.17e-27;33!CL:0002057;4.17e-27;33!CL:0000766;6.47e-26;69!CL:0000473;3.60e-23;39!CL:0000234;3.60e-23;39!CL:0000576;8.93e-23;48!CL:0000094;1.03e-21;8!CL:0002393;2.28e-16;6!CL:0002397;2.28e-16;6!CL:0000081;7.14e-16;11!CL:0000763;1.34e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.58e-46,42;CL:0002057,1.58e-46,42;CL:0000766,3.72e-44,72;CL:0000473,1.76e-40,48;CL:0000234,1.76e-40,48;CL:0000767,3.89e-33,3;CL:0002194,5.24e-32,59;CL:0000576,5.24e-32,59;CL:0000040,5.24e-32,59;CL:0000559,5.24e-32,59;CL:0002009,6.51e-31,61;CL:0000763,7.71e-29,108;CL:0000049,7.71e-29,108;CL:0000839,1.84e-28,66;CL:0000557,5.15e-28,67;CL:0000738,2.99e-25,136;CL:0000094,9.51e-22,8;CL:0000037,5.03e-20,168;CL:0002393,5.32e-19,9;CL:0002397,5.32e-19,9;CL:0000988,6.84e-19,177;CL:0002032,1.21e-18,161;CL:0000837,1.21e-18,161;CL:0002087,4.68e-18,115;CL:0000081,6.76e-16,11;CL:0002031,7.31e-15,120;CL:0000134,3.33e-08,354;CL:0002320,5.41e-08,361;CL:0000219,2.99e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;7.26e-33;42!CL:0000049;6.78e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.02e-58!80;UBERON:0002390!7.10e-54!102;UBERON:0003061!7.10e-54!102;UBERON:0001474!2.05e-53!86;UBERON:0002193!3.73e-48!112;UBERON:0004765!4.54e-44!101;UBERON:0001434!4.54e-44!101;UBERON:0002405!1.31e-39!115;UBERON:0002204!8.19e-23!167;UBERON:0003081!6.01e-20!216;UBERON:0002384!9.84e-15!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.64e-24,76;UBERON:0001474,1.35e-22,82;UBERON:0002390,1.59e-21,98;UBERON:0003061,1.59e-21,98;UBERON:0004765,1.96e-20,90;UBERON:0002405,1.02e-19,93;UBERON:0002193,2.36e-19,108;UBERON:0001434,3.27e-18,100;UBERON:0002204,4.08e-10,167;UBERON:0003081,2.65e-09,203;UBERON:0002384,1.05e-07,371 | |||
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| ||
|short_description=p@chr2:99122586..99122606,- | |||
}} | }} |
Latest revision as of 13:30, 29 July 2015
Short description: | p@chr2:99122586..99122606, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:99122586..99122606, - |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.58e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.58e-46 | 42 |
myeloid leukocyte | 3.72e-44 | 72 |
defensive cell | 1.76e-40 | 48 |
phagocyte | 1.76e-40 | 48 |
basophil | 3.89e-33 | 3 |
monopoietic cell | 5.24e-32 | 59 |
monocyte | 5.24e-32 | 59 |
monoblast | 5.24e-32 | 59 |
promonocyte | 5.24e-32 | 59 |
macrophage dendritic cell progenitor | 6.51e-31 | 61 |
myeloid cell | 7.71e-29 | 108 |
common myeloid progenitor | 7.71e-29 | 108 |
myeloid lineage restricted progenitor cell | 1.84e-28 | 66 |
granulocyte monocyte progenitor cell | 5.15e-28 | 67 |
leukocyte | 2.99e-25 | 136 |
granulocyte | 9.51e-22 | 8 |
hematopoietic stem cell | 5.03e-20 | 168 |
intermediate monocyte | 5.32e-19 | 9 |
CD14-positive, CD16-positive monocyte | 5.32e-19 | 9 |
hematopoietic cell | 6.84e-19 | 177 |
hematopoietic oligopotent progenitor cell | 1.21e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.21e-18 | 161 |
nongranular leukocyte | 4.68e-18 | 115 |
blood cell | 6.76e-16 | 11 |
hematopoietic lineage restricted progenitor cell | 7.31e-15 | 120 |
mesenchymal cell | 3.33e-08 | 354 |
connective tissue cell | 5.41e-08 | 361 |
motile cell | 2.99e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.64e-24 | 76 |
bone element | 1.35e-22 | 82 |
hematopoietic system | 1.59e-21 | 98 |
blood island | 1.59e-21 | 98 |
skeletal element | 1.96e-20 | 90 |
immune system | 1.02e-19 | 93 |
hemolymphoid system | 2.36e-19 | 108 |
skeletal system | 3.27e-18 | 100 |
musculoskeletal system | 4.08e-10 | 167 |
lateral plate mesoderm | 2.65e-09 | 203 |
connective tissue | 1.05e-07 | 371 |