FFCP PHASE1:Hg19::chr3:112359673..112359680,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:112359673..112359680,-
|short_description=p32@CCDC80
|description=CAGE_peak_32_at_CCDC80_5end
|association_with_transcript=222bp_to_ENST00000475181_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=151887 | |EntrezGene=151887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30649 | |HGNC=30649 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=222bp_to_ENST00000475181_5end | |||
|cluster_id=chr3:112359673..112359680,- | |||
|coexpression_cluster_id=C1078 | |||
|description=CAGE_peak_32_at_CCDC80_5end | |||
|id=chr3:112359673..112359680,- | |||
|ontology_enrichment_celltype=CL:0000055!9.80e-20!180;CL:0000057!9.58e-17!75;CL:0002334!6.57e-08!12;CL:0000680!6.95e-08!57;CL:0000056!6.95e-08!57;CL:0000355!6.95e-08!57;CL:0000499!2.05e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002334;4.13e-12;12!CL:0002580;1.40e-10;3!CL:0002579;3.42e-10;3!CL:0002620;6.98e-09;23!CL:0000153;4.04e-08;9!CL:0000447;4.04e-08;9!CL:1000306;5.11e-08;4!CL:0002547;5.11e-08;4!CL:0002617;2.91e-07;2!CL:0000499;5.27e-07;28!CL:0000057;9.13e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.36e-18,76;CL:0002334,3.18e-12,12;CL:0002580,1.33e-10,3;CL:0002579,2.42e-10,3;CL:0002620,7.87e-09,23;CL:0000153,2.66e-08,9;CL:0000447,2.66e-08,9;CL:1000306,4.80e-08,4;CL:0002547,4.80e-08,4;CL:0000048,1.13e-07,427;CL:0000134,1.28e-07,354;CL:0002617,1.50e-07,2;CL:0000723,2.11e-07,433;CL:0002320,2.88e-07,361;CL:0000499,3.38e-07,28;CL:0000136,3.42e-07,15;CL:0000034,4.71e-07,441;CL:0000327,7.82e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.34e-07;4!UBERON:0007284;2.34e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.14e-08!84;UBERON:0000948!1.15e-08!24;UBERON:0005498!1.15e-08!24;UBERON:0004140!1.15e-08!24;UBERON:0009881!1.15e-08!24;UBERON:0004141!1.15e-08!24;UBERON:0003084!1.15e-08!24;UBERON:0007005!1.15e-08!24;UBERON:0004139!1.15e-08!24;UBERON:0004291!1.15e-08!24;UBERON:0000914!3.47e-08!83;UBERON:0002329!3.47e-08!83;UBERON:0003077!3.47e-08!83;UBERON:0003059!3.47e-08!83;UBERON:0007282!3.47e-08!83;UBERON:0009618!3.47e-08!83;UBERON:0007285!3.47e-08!83;UBERON:0001134!3.86e-07!61;UBERON:0002036!3.86e-07!61;UBERON:0003082!3.86e-07!61;UBERON:0007100!5.24e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.94e-16;9!UBERON:0000042;1.94e-16;9!UBERON:0003688;1.30e-13;6!UBERON:0002358;1.30e-13;6!UBERON:0003684;1.30e-13;6!UBERON:0001178;1.30e-13;6!UBERON:0004797;5.11e-08;4!UBERON:0000415;5.11e-08;4!UBERON:0007240;5.11e-08;4!UBERON:0005742;5.11e-08;4!UBERON:0005734;5.11e-08;4!UBERON:0004664;5.11e-08;4!UBERON:0004663;5.11e-08;4!UBERON:0000310;7.27e-08;10!UBERON:0000948;1.85e-07;22!UBERON:0005406;2.50e-07;2!UBERON:0001443;4.13e-07;11!UBERON:0002133;9.38e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.83e-14,6;UBERON:0002358,9.83e-14,6;UBERON:0003684,9.83e-14,6;UBERON:0001178,9.83e-14,6;UBERON:0004457,2.73e-12,12;UBERON:0000042,2.73e-12,12;UBERON:0004797,6.20e-11,7;UBERON:0000948,2.01e-08,24;UBERON:0005498,2.01e-08,24;UBERON:0004140,2.01e-08,24;UBERON:0009881,2.01e-08,24;UBERON:0004141,2.01e-08,24;UBERON:0003084,2.01e-08,24;UBERON:0007005,2.01e-08,24;UBERON:0004139,2.01e-08,24;UBERON:0004291,2.01e-08,24;UBERON:0000415,4.80e-08,4;UBERON:0007240,4.80e-08,4;UBERON:0005742,4.80e-08,4;UBERON:0005734,4.80e-08,4;UBERON:0004664,4.80e-08,4;UBERON:0004663,4.80e-08,4;UBERON:0000310,5.19e-08,10;UBERON:0005406,2.33e-07,2;UBERON:0002384,2.45e-07,371;UBERON:0007100,2.63e-07,27;UBERON:0001443,3.05e-07,11 | |||
|phase1_expression=1.99846217197612,3.42560838225573,4.79244973926302,0,4.02264984984559,4.36169262050184,0,0,0.522371256399677,0,0,0.655324116390517,0,0.495065411840187,0.994192127183747,0.672325146451775,0.602694528023977,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0,1.40648818027883,0.722878304769133,3.00802746381534,0.869079113764942,1.5905718941022,1.45990461090791,0.0945348171640679,0.221729397462564,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,2.65924074495618,0.529636723252875,3.72887606973458,2.12801029319014,1.12135520028461,1.06748995729705,0.74000264525148,1.55605517699883,0.404132016209064,0.163461903113459,0.454072282934794,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0.125118519871964,0.277064115484183,0.877955241761676,0.919463387397059,0.300476117813194,0.226864366320042,1.25572744982203,0.85422955527427,1.69545520927649,2.10063767259082,0.618315175430633,1.54584324027377,0.744467425326359,1.35021065793013,1.26668106709558,0.757301322732344,1.84099797284599,0.484938170456436,3.55009592516614,0.806016785821122,1.01736355386293,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.928735856063958,0.721879481669586,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0.587043471179108,0.721832238805369,0,0.570762456703795,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.336393253036082,0.43596006883328,0.36669142910475,0.775630294546667,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0.479249710983165,0,0,1.73737568001095,0.61642896765115,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,1.66376689224646,1.42743191037729,1.10391690523754,0.702848489956279,1.50473049863859,0,0,0,0.368738337083406,0.260650843404249,0,0,0,0,0,0,1.66435439510497,0.604780586659361,2.97729369382532,2.14846762603287,3.08726103876381,3.71603532841533,1.53512174720011,2.89537058058494,1.48418066444991,0.308419387605311,0.710246901252508,0.164254312027618,0,0.232420756919918,0,0,0,0.68888668898764,0.546273504020151,1.18011973463482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0.650756789328606,0.206082023295445,0.27470839445503,0.330037999682352,0,0,1.6068392984416,0.096670718292122,0.308097234229289,0,0.137836572484531,0.214840489736547,0.145016693914229,0.170453254832202,0.534192213880424,0,0.192190067365106,0.127612712494584,0,0.464845549297286,1.88887408098384,0,0.616067160352178,0.532306030317022,0,0.18532421910392,0.143124886741991,0.744316738719335,0.949138274156178,0.953150969619124,0,0,0.318203247925937,0,0.899362287916574,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.272999822815972,0.707027159768564,3.39024349860728,0.551365343546124,1.32687795048244,0,0,0,0.405820753925408,0.30982349809975,0.281695602532241,0.143411352204052,0.392996164052485,0,0,1.47775344708365,1.97576935775941,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0.890894042497916,0,0,0,0.333926115068718,0,0,0.19924798825107,0,0,0,0,2.17727711363265,0.0898683511473268,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0,0,0,0.692552326534174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0.611030144933625,0,0,0,0.269604531922708,0,0,0,0,0,0.394584402849391,0,0,0.947798694427319,0,0,0,0,0,0,0,0,0,0,0.174118413160805,1.22308667769421,0.343972064943233,0,0.0730893170861856,0,0.290967049465258,0,0,0.411125773940253,0,0,0,0.240476460754601,0.640358984218058,0,0,0,0,0,0.124252535565433,0,0,0,0.713987523454252,0,0,0,0,0.859530882839914,0,1.11712960508902,0.458320848023367,1.43574604915363,0,0,0,0.201550417460179,2.88239906833923,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.104909176269996,0,0,0,0.714695326373367,0,0,2.17199840701485,1.72844298240254,0,0,0,1.36310417428337,0.113312091520126,0,0,0,0.13223260174269,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0.5013797880454,0,0.983617892129413,0,0,0.244052529803926,0,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0.298509605773748,1.16856654923612,1.66441758450784,0.568209015825267,1.0062716070103,0,0.686520205190771,2.11723293268535,0.310874401165561,0.443565449968902,0.159296767163702,0,0.621051827505038,0,1.59505028734797,0,1.20206087197775,2.28483127301277,0,0.545545977607678,0.214821114084977,0,1.19428766609585,0,1.03018711554838,0.336749488765919,0,0,0,0.26099429196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| ||
|short_description=p32@CCDC80 | |||
}} | }} |
Latest revision as of 14:37, 19 September 2015
Short description: | p32@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_32_at_CCDC80_5end |
Coexpression cluster: | C1078_Cardiac_Preadipocyte_Fibroblast_Chondrocyte_Synoviocyte_Ewing_Smooth |
Association with transcript: | 222bp_to_ENST00000475181_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.36e-18 | 76 |
preadipocyte | 3.18e-12 | 12 |
preadipocyte of the breast | 1.33e-10 | 3 |
omentum preadipocyte | 2.42e-10 | 3 |
skin fibroblast | 7.87e-09 | 23 |
GAG secreting cell | 2.66e-08 | 9 |
carbohydrate secreting cell | 2.66e-08 | 9 |
fibroblast of tunica adventitia of artery | 4.80e-08 | 4 |
fibroblast of the aortic adventitia | 4.80e-08 | 4 |
multi fate stem cell | 1.13e-07 | 427 |
mesenchymal cell | 1.28e-07 | 354 |
adipocyte of breast | 1.50e-07 | 2 |
somatic stem cell | 2.11e-07 | 433 |
connective tissue cell | 2.88e-07 | 361 |
stromal cell | 3.38e-07 | 28 |
fat cell | 3.42e-07 | 15 |
stem cell | 4.71e-07 | 441 |
extracellular matrix secreting cell | 7.82e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 9.83e-14 | 6 |
peritoneum | 9.83e-14 | 6 |
abdominal cavity | 9.83e-14 | 6 |
visceral peritoneum | 9.83e-14 | 6 |
cavity lining | 2.73e-12 | 12 |
serous membrane | 2.73e-12 | 12 |
blood vessel layer | 6.20e-11 | 7 |
heart | 2.01e-08 | 24 |
primitive heart tube | 2.01e-08 | 24 |
primary heart field | 2.01e-08 | 24 |
anterior lateral plate mesoderm | 2.01e-08 | 24 |
heart tube | 2.01e-08 | 24 |
heart primordium | 2.01e-08 | 24 |
cardiac mesoderm | 2.01e-08 | 24 |
cardiogenic plate | 2.01e-08 | 24 |
heart rudiment | 2.01e-08 | 24 |
artery wall | 4.80e-08 | 4 |
tunica adventitia of artery | 4.80e-08 | 4 |
adventitia | 4.80e-08 | 4 |
tunica adventitia of blood vessel | 4.80e-08 | 4 |
aorta tunica adventitia | 4.80e-08 | 4 |
aorta wall | 4.80e-08 | 4 |
breast | 5.19e-08 | 10 |
perirenal fat | 2.33e-07 | 2 |
connective tissue | 2.45e-07 | 371 |
primary circulatory organ | 2.63e-07 | 27 |
chest | 3.05e-07 | 11 |