FFCP PHASE1:Hg19::chr3:125899721..125899736,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:125899721..125899736,-
|short_description=p5@ALDH1L1
|description=CAGE_peak_5_at_ALDH1L1_5end
|association_with_transcript=-76bp_to_ENST00000393434,ENST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10840 | |EntrezGene=10840 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3978 | |HGNC=3978 | ||
|TSSclassifier=strong | |||
|UniProt=O75891,C9JYZ6 | |UniProt=O75891,C9JYZ6 | ||
|association_with_transcript=-76bp_to_ENST00000393434,ENST00000460368_5end | |||
|cluster_id=chr3:125899721..125899736,- | |||
|description=CAGE_peak_5_at_ALDH1L1_5end | |||
|id=chr3:125899721..125899736,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002623;7.01e-23;3!CL:0000622;5.82e-14;5!CL:0000154;1.01e-11;6!CL:0000136;5.92e-09;13!CL:0000244;3.06e-08;4!CL:0000731;3.06e-08;4!CL:0000150;5.72e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,5.63e-23,3;CL:0000622,5.11e-14,5;CL:0000154,9.09e-12,6;CL:0000244,3.54e-08,4;CL:0000731,3.54e-08,4;CL:0000150,5.33e-08,9;CL:0000136,8.76e-08,15 | |||
|ontology_enrichment_development_v019=UBERON:0008801;9.46e-09;1!UBERON:0006298;1.47e-08;1!UBERON:0004874;2.84e-08;1 | |||
|ontology_enrichment_disease_v019=DOID:114;8.04e-16;2!DOID:178;1.47e-08;1!DOID:326;1.47e-08;1!DOID:3978;1.47e-08;1!DOID:3394;1.47e-08;1!DOID:5844;1.47e-08;1!DOID:1287;2.38e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.66e-16,2;DOID:178,1.59e-08,1;DOID:326,1.59e-08,1;DOID:3978,1.59e-08,1;DOID:3394,1.59e-08,1;DOID:5844,1.59e-08,1;DOID:1287,2.47e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.05e-52!115;UBERON:0001049!4.74e-30!57;UBERON:0005068!4.74e-30!57;UBERON:0006241!4.74e-30!57;UBERON:0007135!4.74e-30!57;UBERON:0002616!3.03e-25!59;UBERON:0003075!8.02e-25!86;UBERON:0007284!8.02e-25!86;UBERON:0002346!4.57e-23!90;UBERON:0000153!1.45e-22!129;UBERON:0007811!1.45e-22!129;UBERON:0000033!3.21e-22!123;UBERON:0005743!4.60e-22!86;UBERON:0001017!3.44e-21!82;UBERON:0000955!1.09e-20!69;UBERON:0006238!1.09e-20!69;UBERON:0000073!1.17e-19!94;UBERON:0001016!1.17e-19!94;UBERON:0003080!8.73e-19!42;UBERON:0002780!1.06e-17!41;UBERON:0001890!1.06e-17!41;UBERON:0006240!1.06e-17!41;UBERON:0004121!2.14e-17!169;UBERON:0003056!7.90e-17!61;UBERON:0000924!1.40e-16!173;UBERON:0006601!1.40e-16!173;UBERON:0001893!5.73e-16!34;UBERON:0002020!9.23e-16!34;UBERON:0003528!9.23e-16!34;UBERON:0002791!3.72e-15!33;UBERON:0001869!5.03e-14!32;UBERON:0003076!5.91e-13!15;UBERON:0003057!5.91e-13!15;UBERON:0004111!7.62e-13!241;UBERON:0000475!3.23e-12!365;UBERON:0004733!6.85e-12!12;UBERON:0002028!6.85e-12!12;UBERON:0007277!6.85e-12!12;UBERON:0000025!1.16e-11!194;UBERON:0000481!5.10e-11!347;UBERON:0001044!5.58e-11!6;UBERON:0003293!5.58e-11!6;UBERON:0003294!5.58e-11!6;UBERON:0010047!5.58e-11!6;UBERON:0000167!5.58e-11!6;UBERON:0004732!9.16e-11!13;UBERON:0000477!1.08e-10!286;UBERON:0002298!1.16e-10!8;UBERON:0000956!8.97e-10!25;UBERON:0000203!8.97e-10!25;UBERON:0002365!2.25e-09!31;UBERON:0002330!2.25e-09!31;UBERON:0000119!3.65e-09!312;UBERON:0000483!4.92e-09!309;UBERON:0002619!1.14e-08!22;UBERON:0002680!3.03e-08!9;UBERON:0001895!3.03e-08!9;UBERON:0010092!3.03e-08!9;UBERON:0000467!3.16e-08!625;UBERON:0000480!3.67e-08!626;UBERON:0002308!5.17e-08!9;UBERON:0000125!5.17e-08!9;UBERON:0003408!7.06e-08!10;UBERON:0000062!1.02e-07!511;UBERON:0000923!1.57e-07!604;UBERON:0005291!1.57e-07!604;UBERON:0006598!1.57e-07!604;UBERON:0002532!1.57e-07!604;UBERON:0000922!1.67e-07!612;UBERON:0002050!1.82e-07!605;UBERON:0005423!1.82e-07!605;UBERON:0000078!2.46e-07!18;UBERON:0000468!4.25e-07!659;UBERON:0001950!7.42e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;7.50e-44;6!UBERON:0003293;7.50e-44;6!UBERON:0003294;7.50e-44;6!UBERON:0010047;7.50e-44;6!UBERON:0003408;7.50e-44;6!UBERON:0000167;7.50e-44;6!UBERON:0002365;1.57e-21;31!UBERON:0002330;1.57e-21;31!UBERON:0001041;1.49e-18;14!UBERON:0001829;1.34e-15;2!UBERON:0000161;1.54e-13;19!UBERON:0000166;1.54e-13;19!UBERON:0000165;4.37e-12;28!UBERON:0001831;9.46e-09;1!UBERON:0001389;9.46e-09;1!UBERON:0000026;9.46e-09;1!UBERON:0008784;9.46e-09;1!UBERON:0006058;9.46e-09;1!UBERON:0003663;9.46e-09;1!UBERON:0004256;9.46e-09;1!UBERON:0004708;9.46e-09;1!UBERON:0002101;9.46e-09;1!UBERON:0004709;9.46e-09;1!UBERON:0002529;9.46e-09;1!UBERON:0010538;9.46e-09;1!UBERON:0003661;9.46e-09;1!UBERON:0010890;9.46e-09;1!UBERON:0002471;9.46e-09;1!UBERON:0001383;9.46e-09;1!UBERON:0010758;9.46e-09;1!UBERON:0010707;9.46e-09;1!UBERON:0000978;9.46e-09;1!UBERON:0002103;9.46e-09;1!UBERON:0001665;9.46e-09;1!UBERON:0003823;9.46e-09;1!UBERON:0001567;9.46e-09;1!UBERON:0000154;9.46e-09;1!UBERON:0010709;9.46e-09;1!UBERON:0001736;1.47e-08;1!UBERON:0000989;2.84e-08;1!UBERON:0008811;2.84e-08;1!UBERON:0000365;9.43e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,4.84e-44,6;UBERON:0003293,4.84e-44,6;UBERON:0003294,4.84e-44,6;UBERON:0010047,4.84e-44,6;UBERON:0000167,4.84e-44,6;UBERON:0003408,2.87e-26,10;UBERON:0002365,1.09e-21,31;UBERON:0002330,1.09e-21,31;UBERON:0001829,1.08e-15,2;UBERON:0000166,1.23e-15,22;UBERON:0000165,1.16e-11,29;UBERON:0000930,1.16e-11,29;UBERON:0002530,1.32e-10,59;UBERON:0001041,1.02e-09,87;UBERON:0000161,3.14e-09,36;UBERON:0005418,8.15e-09,1;UBERON:0001389,8.15e-09,1;UBERON:0000026,8.15e-09,1;UBERON:0008784,8.15e-09,1;UBERON:0006058,8.15e-09,1;UBERON:0003663,8.15e-09,1;UBERON:0004256,8.15e-09,1;UBERON:0004708,8.15e-09,1;UBERON:0002101,8.15e-09,1;UBERON:0004709,8.15e-09,1;UBERON:0002529,8.15e-09,1;UBERON:0010538,8.15e-09,1;UBERON:0003661,8.15e-09,1;UBERON:0010890,8.15e-09,1;UBERON:0002471,8.15e-09,1;UBERON:0001383,8.15e-09,1;UBERON:0004357,8.15e-09,1;UBERON:0004347,8.15e-09,1;UBERON:0005420,8.15e-09,1;UBERON:0005732,8.15e-09,1;UBERON:0010758,8.15e-09,1;UBERON:0010707,8.15e-09,1;UBERON:0000978,8.15e-09,1;UBERON:0002103,8.15e-09,1;UBERON:0001665,8.15e-09,1;UBERON:0003823,8.15e-09,1;UBERON:0000154,8.15e-09,1;UBERON:0010709,8.15e-09,1;UBERON:0005733,8.15e-09,1;UBERON:0005730,8.15e-09,1;UBERON:0001831,8.78e-09,1;UBERON:0001567,8.78e-09,1;UBERON:0008801,8.78e-09,1;UBERON:0001736,1.27e-08,1;UBERON:0006298,1.27e-08,1;UBERON:0000989,2.13e-08,1;UBERON:0008811,2.13e-08,1;UBERON:0006258,2.13e-08,1;UBERON:0005876,2.13e-08,1;UBERON:0004874,2.13e-08,1;UBERON:0007023,2.88e-08,114 | |||
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|short_description=p5@ALDH1L1 | |||
}} | }} |
Latest revision as of 03:54, 20 September 2015
Short description: | p5@ALDH1L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ALDH1L1_5end |
Coexpression cluster: | NA |
Association with transcript: | -76bp_to_ENST00000393434, ENST00000460368_5end |
EntrezGene: | ALDH1L1 |
HGNC: | 3978 |
UniProt: | O75891C9JYZ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 5.63e-23 | 3 |
acinar cell | 5.11e-14 | 5 |
protein secreting cell | 9.09e-12 | 6 |
transitional epithelial cell | 3.54e-08 | 4 |
urothelial cell | 3.54e-08 | 4 |
glandular epithelial cell | 5.33e-08 | 9 |
fat cell | 8.76e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
heart disease | 8.66e-16 | 2 |
vascular disease | 1.59e-08 | 1 |
ischemia | 1.59e-08 | 1 |
extrinsic cardiomyopathy | 1.59e-08 | 1 |
myocardial ischemia | 1.59e-08 | 1 |
myocardial infarction | 1.59e-08 | 1 |
cardiovascular system disease | 2.47e-08 | 4 |