FFCP PHASE1:Hg19::chr3:18467290..18467311,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:18467290..18467311,-
|short_description=p8@SATB1
|description=CAGE_peak_8_at_SATB1_5end
|association_with_transcript=-429bp_to_ENST00000450898_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6304 | |EntrezGene=6304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10541 | |HGNC=10541 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-429bp_to_ENST00000450898_5end | |||
|cluster_id=chr3:18467290..18467311,- | |||
|coexpression_cluster_id=C440 | |||
|description=CAGE_peak_8_at_SATB1_5end | |||
|id=chr3:18467290..18467311,- | |||
|ontology_enrichment_celltype=CL:0000037!4.07e-20!172;CL:0000566!4.07e-20!172;CL:0000988!3.20e-18!182;CL:0002032!2.72e-17!165;CL:0000837!2.72e-17!165;CL:0000738!2.83e-13!140;CL:0000084!1.58e-10!25;CL:0000827!1.58e-10!25;CL:0000763!6.27e-10!112;CL:0000049!6.27e-10!112;CL:0000791!1.56e-09!18;CL:0000789!1.56e-09!18;CL:0002420!1.56e-09!18;CL:0002419!1.56e-09!18;CL:0000790!1.56e-09!18;CL:0002031!7.04e-09!124;CL:0002087!1.88e-08!119;CL:0000838!3.53e-08!52;CL:0000542!7.90e-08!53;CL:0000051!7.90e-08!53;CL:0000094!1.42e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.18e-12;18!CL:0000789;4.18e-12;18!CL:0002419;4.18e-12;18!CL:0000084;1.92e-11;25!CL:0000094;2.03e-10;8!CL:0000625;2.63e-08;11!CL:0000775;1.14e-07;3!CL:0000081;2.54e-07;11!CL:0000226;7.46e-07;3!CL:0000842;7.46e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.36e-18,168;CL:0000988,5.68e-17,177;CL:0002032,5.95e-14,161;CL:0000837,5.95e-14,161;CL:0000738,3.25e-12,136;CL:0000791,3.59e-12,18;CL:0000789,3.59e-12,18;CL:0002420,3.59e-12,18;CL:0002419,3.59e-12,18;CL:0000790,3.59e-12,18;CL:0000084,1.37e-11,25;CL:0000827,1.37e-11,25;CL:0000094,1.41e-10,8;CL:0000838,1.01e-09,52;CL:0000542,1.89e-09,53;CL:0000051,1.89e-09,53;CL:0000625,2.09e-08,11;CL:0002087,3.04e-08,115;CL:0000775,7.97e-08,3;CL:0000081,1.97e-07,11;CL:0000226,5.55e-07,3;CL:0000842,5.55e-07,3;CL:0000623,6.99e-07,3;CL:0000825,6.99e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;4.18e-12;18 | |||
|ontology_enrichment_disease=DOID:1240!1.70e-10!39;DOID:8692!3.85e-10!31;DOID:2531!9.74e-10!51;DOID:0060083!9.74e-10!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.42e-11;31!DOID:1240;3.50e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.52e-11,31;DOID:1240,5.75e-11,39;DOID:2531,1.32e-08,51;DOID:0060083,1.32e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.51e-17!115;UBERON:0001049!2.04e-07!57;UBERON:0005068!2.04e-07!57;UBERON:0006241!2.04e-07!57;UBERON:0007135!2.04e-07!57;UBERON:0002780!2.04e-07!41;UBERON:0001890!2.04e-07!41;UBERON:0006240!2.04e-07!41;UBERON:0003080!4.80e-07!42;UBERON:0002616!9.49e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,4.72037132218685,0.383829398097213,0.619264493264304,0,0,0,0,0,2.64240395401362,0,0.401088894940283,1.30206522429511,0,0.647787332037959,0,0.145398238779565,0,0,0,0,0.929119112685311,0.28769239232215,1.0246428261164,0.236482229888585,1.37898272294647,0.645484683583826,0,0.564727018627814,0.545812300115692,0.224723484445085,1.22433556948361,0.641858054152187,0,0,0,0,0.580418477257168,0.56738522469114,0,0,0,0.217188844705117,0,0,0,0,0,0.209658645508376,0.336985893439485,0.450530678524519,0.48217676009124,0.570025487482497,0.19891667719909,0,0,0.546138611262131,0,2.13365111283254,0,1.14950487990897,1.32208974556972,0,0,0.587237189370939,0,5.28685314316103,3.36305137788922,0.526768169550154,2.16380747125216,4.32311839024081,1.43921049299656,0.668745981562712,3.58514493296949,0.473447805734733,1.94826728407911,0.779873198196215,0.294605907474837,0.221533894583621,0.541607727530031,1.40900451698243,0.650296737799391,2.79544437826249,2.21080014228679,2.31842468588042,2.66915813691709,2.67540828089713,3.1360657141493,1.47302145506836,0.383220493601921,1.71813722741315,0.506039384039006,2.22995790026868,2.60433381542567,0,1.35517607169996,1.53583933385302,1.24930726552346,0.710331756132051,0,0.80642697289893,1.60464117470104,1.73789284659359,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,1.19245312152671,0,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.5317047953172,0,0,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0.176096868026452,0.414656231081544,0.432359860250884,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,1.57624608161542,1.72502059887614,1.79680250791648,0.254094624222463,0,0,0.335032530668698,0,2.99602809578873,2.99161459204025,3.31532410748828,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,1.44737618286021,1.94142780736755,2.13455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,1.13733384070897,0,0,0,0,0.501689773854853,0,0,0,0.219259876645935,0,0,0.328014645699706,0.325378394664303,0.721287081534056,0.366277859273374,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0.43050537267123,0,0,0,0,1.52927441428475,0.569647187174163,0.714695326373367,0.411362273086194,1.29694662238543,1.08006287447623,1.58625035258854,0.106824071127473,0,0,0,0.144269212976445,1.92082977040718,2.55082036366116,1.99579371432817,0.957526850661834,1.05836791361941,0.649243880549111,0.561594356226918,3.19528550646469,1.09675927041116,2.50634477090067,0.677167111206413,0.1605880751037,8.67738740921505,2.55507742614196,0.343505344755765,8.29550063632837,7.15763545255731,7.50821137703588,0,0,2.46174797895425,0.270455678475983,4.66300755196948,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0.988823245360557,0,0.796991953004279,0,3.02319297425131,0,0,0,0,0,30.6943422136123,0.197286811273867,0,0,0,0.371072392647405,0,0,0,0,0,0,0,5.17115059862197,0,0,0.885741385813839,0,1.52581736317083,1.10579259931225,0,0.219385397153973,0,0.41827123283581,0.153900517007594,0,0,0,0.54323685961004,0,0,0,0,1.72678282034527,0,0,0,0,0.189753732724185,0.158936578980379,0,0,0,0,0.995261931078505,0.265372693510018,0.611030144933625,0,0,0.104421949505455,0.067401132980677,0,0.234264445725339,0.364909578431332,0,0.485560759068186,1.97292201424695,0,0,0.189559738885464,0.60129367765797,0.414752765588989,0,0.330991955875499,0,0,0.284609546029793,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0.443175571691151,0.195551382734803,0.400794101257669,0.213452994739353,0,0.432271251462318,0,2.23073497220554,0,0.372757606696298,0,0.407712618220842,0.104602846312333,0,0,0,0.273810757783986,0,0,0.525774708558629,0,0,0,0,1.28767814440971,0.669514372325618,0.201550417460179,0,0,0,0,0,0,0,0,0.953423842781029,0,0.275078873194468,0,0.674921674654501,0.77380195455795,0.728994679896296,0,0.315222829196793,0.157363764404994,0.422401346077626,0,0,0,0.662091970365432,0,0,0,0,0,0.410462603746695,0,0.113312091520126,0.732761168390412,1.32506888912221,0.258565912723101,0.13223260174269,0,0,0.213574825135389,0.157204305099666,0,0,0,0.365377795142688,0,0,0,0,0,0.628216385000937,0.886068179966986,1.58634144372552,1.001527445652,0.573409195690071,0.110929051536852,0.18628920882415,0,0,0.151649117541648,0,0,4.21501415226193,2.17381542916238,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0.19998739585493,1.92045113449454,0,0,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| ||
|short_description=p8@SATB1 | |||
}} | }} |
Latest revision as of 03:09, 17 September 2015
Short description: | p8@SATB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SATB1_5end |
Coexpression cluster: | C440_biphenotypic_acute_immature_splenic_B_myelodysplastic_Eosinophils |
Association with transcript: | -429bp_to_ENST00000450898_5end |
EntrezGene: | SATB1 |
HGNC: | 10541 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.36e-18 | 168 |
hematopoietic cell | 5.68e-17 | 177 |
hematopoietic oligopotent progenitor cell | 5.95e-14 | 161 |
hematopoietic multipotent progenitor cell | 5.95e-14 | 161 |
leukocyte | 3.25e-12 | 136 |
mature alpha-beta T cell | 3.59e-12 | 18 |
alpha-beta T cell | 3.59e-12 | 18 |
immature T cell | 3.59e-12 | 18 |
mature T cell | 3.59e-12 | 18 |
immature alpha-beta T cell | 3.59e-12 | 18 |
T cell | 1.37e-11 | 25 |
pro-T cell | 1.37e-11 | 25 |
granulocyte | 1.41e-10 | 8 |
lymphoid lineage restricted progenitor cell | 1.01e-09 | 52 |
lymphocyte | 1.89e-09 | 53 |
common lymphoid progenitor | 1.89e-09 | 53 |
CD8-positive, alpha-beta T cell | 2.09e-08 | 11 |
nongranular leukocyte | 3.04e-08 | 115 |
neutrophil | 7.97e-08 | 3 |
blood cell | 1.97e-07 | 11 |
single nucleate cell | 5.55e-07 | 3 |
mononuclear cell | 5.55e-07 | 3 |
natural killer cell | 6.99e-07 | 3 |
pro-NK cell | 6.99e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.52e-11 | 31 |
leukemia | 5.75e-11 | 39 |
hematologic cancer | 1.32e-08 | 51 |
immune system cancer | 1.32e-08 | 51 |