FFCP PHASE1:Hg19::chr3:50654619..50654632,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:50654619..50654632,+
|short_description=p2@MAPKAPK3
|description=CAGE_peak_2_at_MAPKAPK3_5end
|association_with_transcript=4bp_to_uc003dba.1_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7867 | |EntrezGene=7867 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6888 | |HGNC=6888 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_uc003dba.1_5end | |||
|cluster_id=chr3:50654619..50654632,+ | |||
|description=CAGE_peak_2_at_MAPKAPK3_5end | |||
|id=chr3:50654619..50654632,+ | |||
|ontology_enrichment_celltype=CL:0000763!3.17e-25!112;CL:0000049!3.17e-25!112;CL:0000766!1.03e-21!76;CL:0000988!1.60e-21!182;CL:0000037!4.10e-21!172;CL:0000566!4.10e-21!172;CL:0002057!1.95e-20!42;CL:0000860!1.96e-20!45;CL:0002032!2.99e-19!165;CL:0000837!2.99e-19!165;CL:0000557!8.69e-19!71;CL:0002009!1.79e-18!65;CL:0002194!4.19e-18!63;CL:0000576!4.19e-18!63;CL:0000040!4.19e-18!63;CL:0000559!4.19e-18!63;CL:0000839!1.13e-16!70;CL:0000738!4.68e-16!140;CL:0002087!3.13e-12!119;CL:0002031!6.62e-12!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.19e-15;33!CL:0002057;2.19e-15;33!CL:0000473;1.32e-13;39!CL:0000234;1.32e-13;39!CL:0000576;5.92e-11;48!CL:0000766;3.89e-10;69!CL:0000763;9.62e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.73e-26,108;CL:0000049,4.73e-26,108;CL:0000766,6.58e-23,72;CL:0000988,2.43e-22,177;CL:0000037,9.84e-22,168;CL:0000473,2.92e-21,48;CL:0000234,2.92e-21,48;CL:0000860,7.30e-21,42;CL:0002057,7.30e-21,42;CL:0000557,7.53e-20,67;CL:0002032,8.10e-20,161;CL:0000837,8.10e-20,161;CL:0002009,1.34e-19,61;CL:0002194,3.10e-19,59;CL:0000576,3.10e-19,59;CL:0000040,3.10e-19,59;CL:0000559,3.10e-19,59;CL:0000839,1.32e-17,66;CL:0000738,1.47e-16,136;CL:0002087,9.00e-13,115;CL:0002031,1.91e-12,120;CL:0002076,9.32e-07,42 | |||
|ontology_enrichment_development_v019=CL:0002057;2.96e-15;42!CL:0000049;4.59e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.83e-25!102;UBERON:0003061!3.83e-25!102;UBERON:0002193!5.15e-21!112;UBERON:0002371!3.90e-19!80;UBERON:0001474!5.01e-18!86;UBERON:0004765!1.94e-13!101;UBERON:0001434!1.94e-13!101;UBERON:0002405!4.96e-12!115;UBERON:0003081!3.35e-11!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.92e-26,98;UBERON:0003061,2.92e-26,98;UBERON:0002193,4.05e-22,108;UBERON:0002371,4.08e-20,76;UBERON:0001474,8.78e-19,82;UBERON:0002405,7.45e-17,93;UBERON:0004765,6.67e-16,90;UBERON:0001434,8.07e-12,100;UBERON:0003081,2.08e-09,203 | |||
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| ||
|short_description=p2@MAPKAPK3 | |||
}} | }} |
Latest revision as of 20:39, 18 September 2015
Short description: | p2@MAPKAPK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MAPKAPK3_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_uc003dba.1_5end |
EntrezGene: | MAPKAPK3 |
HGNC: | 6888 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.73e-26 | 108 |
common myeloid progenitor | 4.73e-26 | 108 |
myeloid leukocyte | 6.58e-23 | 72 |
hematopoietic cell | 2.43e-22 | 177 |
hematopoietic stem cell | 9.84e-22 | 168 |
defensive cell | 2.92e-21 | 48 |
phagocyte | 2.92e-21 | 48 |
classical monocyte | 7.30e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.30e-21 | 42 |
granulocyte monocyte progenitor cell | 7.53e-20 | 67 |
hematopoietic oligopotent progenitor cell | 8.10e-20 | 161 |
hematopoietic multipotent progenitor cell | 8.10e-20 | 161 |
macrophage dendritic cell progenitor | 1.34e-19 | 61 |
monopoietic cell | 3.10e-19 | 59 |
monocyte | 3.10e-19 | 59 |
monoblast | 3.10e-19 | 59 |
promonocyte | 3.10e-19 | 59 |
myeloid lineage restricted progenitor cell | 1.32e-17 | 66 |
leukocyte | 1.47e-16 | 136 |
nongranular leukocyte | 9.00e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 1.91e-12 | 120 |
endo-epithelial cell | 9.32e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.92e-26 | 98 |
blood island | 2.92e-26 | 98 |
hemolymphoid system | 4.05e-22 | 108 |
bone marrow | 4.08e-20 | 76 |
bone element | 8.78e-19 | 82 |
immune system | 7.45e-17 | 93 |
skeletal element | 6.67e-16 | 90 |
skeletal system | 8.07e-12 | 100 |
lateral plate mesoderm | 2.08e-09 | 203 |