FFCP PHASE1:Hg19::chr3:66024921..66024926,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:66024921..66024926,-
|short_description=p12@MAGI1
|description=CAGE_peak_12_at_MAGI1_5end
|association_with_transcript=-412bp_to_ENST00000464060,NM_0010330...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9223 | |EntrezGene=9223 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=946 | |HGNC=946 | ||
|TSSclassifier=strong | |||
|UniProt=Q96QZ7 | |UniProt=Q96QZ7 | ||
|association_with_transcript=-412bp_to_ENST00000464060,NM_001033057,NM_004742,NM_015520,uc003dmm.2,uc003dmn.2,uc003dmo.2,uc003dmp.2,uc003dmr.2_5end | |||
|cluster_id=chr3:66024921..66024926,- | |||
|description=CAGE_peak_12_at_MAGI1_5end | |||
|id=chr3:66024921..66024926,- | |||
|ontology_enrichment_celltype=CL:0000066!7.38e-09!254;CL:0000095!1.04e-08!17;CL:0000123!1.04e-08!17;CL:0000243!4.11e-08!15;CL:0000125!4.11e-08!15;CL:0000030!4.11e-08!15;CL:0000339!4.11e-08!15;CL:0002319!1.22e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.87e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.31e-22,12;CL:0000223,2.03e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.21e-08;11!UBERON:0009497;4.24e-07;13!UBERON:0008425;9.47e-07;1 | |||
|ontology_enrichment_disease=DOID:305!1.38e-14!106;DOID:0050687!4.70e-13!143;DOID:14566!6.07e-08!239;DOID:162!8.50e-08!235 | |||
|ontology_enrichment_disease_v019=DOID:7;2.91e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.88e-08,106;DOID:7,6.38e-08,39;DOID:14566,4.53e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000475!2.78e-09!365;UBERON:0000481!3.65e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0000949;6.47e-14;43!UBERON:0002368;8.44e-14;33!UBERON:0002107;1.38e-13;19!UBERON:0006925;1.38e-13;19!UBERON:0003296;8.33e-13;4!UBERON:0010133;8.33e-13;4!UBERON:0001905;7.62e-12;2!UBERON:0002757;7.62e-12;2!UBERON:0010134;7.62e-12;2!UBERON:0005408;7.62e-12;2!UBERON:0001899;7.62e-12;2!UBERON:0002423;4.19e-10;25!UBERON:0002365;5.77e-10;31!UBERON:0002330;5.77e-10;31!UBERON:0001894;1.62e-07;7!UBERON:0005795;9.47e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000949,2.32e-15,45;UBERON:0002368,4.55e-14,35;UBERON:0002107,8.73e-14,19;UBERON:0006925,8.73e-14,19;UBERON:0008836,8.73e-14,19;UBERON:0007499,3.89e-13,25;UBERON:0009856,1.39e-12,26;UBERON:0003296,1.39e-12,4;UBERON:0010133,1.39e-12,4;UBERON:0008835,8.89e-12,22;UBERON:0003894,8.89e-12,22;UBERON:0001905,1.33e-11,2;UBERON:0002757,1.33e-11,2;UBERON:0010134,1.33e-11,2;UBERON:0005408,1.33e-11,2;UBERON:0001899,1.33e-11,2;UBERON:0009854,3.18e-11,23;UBERON:0002365,2.18e-10,31;UBERON:0002330,2.18e-10,31;UBERON:0009497,2.99e-10,25;UBERON:0000015,2.99e-10,25;UBERON:0002423,2.99e-10,25;UBERON:0006235,2.99e-10,25;UBERON:0004161,2.99e-10,25;UBERON:0002530,3.21e-09,59;UBERON:0001894,2.16e-07,7;UBERON:0006222,2.16e-07,7;UBERON:0005172,6.63e-07,54;UBERON:0005173,6.63e-07,54 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.893922188854576,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0.286235987131057,0.410623275218653,0.627713197974014,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.661743720148475,0.443458794925128,0.175669571386252,0.261958150995425,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0.33472061276467,0,0.760272105718513,0,0,0,0.0892997282840798,0.44905874525234,0.563057402416611,0,0,0,0,0,0.436094052142534,0,0.25326102332916,0.397227542439656,0.860509862246441,0.354668382198357,0,0,0,0,0.404132016209064,0.980771418680752,0,0,0,0,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0.204154171254893,0.245668634623536,0,0,0,0,0.718618141816238,0.168336113954066,0.250237039743928,0,0,0,0.45071417671979,0.113432183160021,0,0,0,0,0.206105058476878,0,0.18611685633159,0.168776332241266,0,0.252433774244115,0.0920498986422993,0.484938170456436,0.710019185033229,0.201504196455281,0,0.193260853163297,0,0,0.609868530647977,0.927708378250397,0.69716365721711,0.725627385107593,0,0,0,0,1.38134921352481,0,0,0.118306800039844,0.168584690078102,0.482022059766964,0,0,0,0.134831308160164,0,0,0,1.40241773803446,0,0,1.26755034821831,2.94848165003288,0,0,0.737930631258681,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0,2.37061319387782,0.858486162094873,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0.381988425558278,1.17217447210047,0,0.102827492703324,0,0,0,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0.144781306667579,0.61642896765115,0.537182889719687,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.157702415033935,0.468565659970853,0,0,0,0,0.184369168541703,0.260650843404249,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0.308419387605311,0,0.0821271560138091,0,0.232420756919918,0.966875596732978,0,0,0.34444334449382,0,0.131124414959424,0,0,0,1.46139224653261,0.211103257785751,0,0,0.215915916102139,0,0.270946437543853,0,0.764628819135115,0.831076008928724,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,0.206082023295445,0.0915694648183434,0.165018999841176,0,0,0,0.386682873168488,0.616194468458578,0.307007349452259,0.275673144969061,0.322260734604821,0.290033387828457,0.426133137080504,0.178064071293475,0,0.192190067365106,0.255225424989168,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0.636406495851874,0,0.719489830333259,0,0.471249609382746,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0.379473173765715,0.349934720244983,0.288666338176536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0.270455678475983,0,0,0.37428108081644,0.439524537815682,0.242721043499027,0,0,0.23874448473769,0,0,0,0.140669416410513,0.667852230137435,0,0.211125408127993,0,0.276283915531148,1.25966373927138,0.409074730008619,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0.969332746095218,0.278304294485554,0,0.260427761085233,1.13697999995054,0,0.1137934482855,1.01701460117107,0,0,0,0.347249989866585,0,0.120596438625408,0,0,0,0.219385397153973,0.10893846351899,0,0.153900517007594,0.341826167541004,0,0.179515288819544,1.73835795075213,0,0.0915975934018623,0,0,0,0.997270091400938,0,0,0,0.189753732724185,0,0,0.326465616318295,1.13082457147153,0,0,0.0884575645033392,0,0,0.617819694732514,0,0.067401132980677,0,0,0,0,0,0,0,0,0.189559738885464,0.60129367765797,0.311064574191741,0.664653872707185,0.330991955875499,1.88359751044335,1.19472429772959,1.70765727617876,0.277349346026277,0.347119476670262,0,0.0870592065804026,0.17472666824203,0.51595809741485,0.290268993867255,0.219267951258557,0.0821154570532092,0,0.970817393606503,0.451961481561065,0,0.794858446811959,0.0633107959558787,0.391102765469606,0.240476460754601,0.213452994739353,0.599428828746391,0,1.4889757501569,0.857974989309823,0.14405479798815,0.124252535565433,0.942776138467182,0.543616824294456,0.418411385249333,0.101998217636322,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0.0671834724867263,0,3.49487848582361,2.12714592229504,1.483485450861,1.61768505250044,0.0984274815147488,0,0,0.136203406111576,0.482259445395058,0.275078873194468,0.415440338029185,0,0,0.242998226632099,0,0.236417121897595,0.157363764404994,0.528001682597033,0,0,0,0,0.25426853765475,0,0,0,0,0.246277562248017,0.170388021785422,0.453248366080503,0.293104467356165,0,0.129282956361551,0.13223260174269,0.342173675768659,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0.7520696820681,0,0,0.628216385000937,0.886068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| ||
|short_description=p12@MAGI1 | |||
}} | }} |
Latest revision as of 10:25, 19 September 2015
Short description: | p12@MAGI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_MAGI1_5end |
Coexpression cluster: | NA |
Association with transcript: | -412bp_to_ENST00000464060, NM_001033057, NM_004742, NM_015520, uc003dmm.2, uc003dmn.2, uc003dmo.2, uc003dmp.2, uc003dmr.2_5end |
EntrezGene: | MAGI1 |
HGNC: | 946 |
UniProt: | Q96QZ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.31e-22 | 12 |
endodermal cell | 2.03e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
endocrine system | 2.32e-15 | 45 |
endocrine gland | 4.55e-14 | 35 |
liver | 8.73e-14 | 19 |
digestive gland | 8.73e-14 | 19 |
liver bud | 8.73e-14 | 19 |
epithelial sac | 3.89e-13 | 25 |
sac | 1.39e-12 | 26 |
gland of diencephalon | 1.39e-12 | 4 |
neuroendocrine gland | 1.39e-12 | 4 |
hepatic diverticulum | 8.89e-12 | 22 |
liver primordium | 8.89e-12 | 22 |
pineal body | 1.33e-11 | 2 |
regional part of epithalamus | 1.33e-11 | 2 |
secretory circumventricular organ | 1.33e-11 | 2 |
circumventricular organ | 1.33e-11 | 2 |
epithalamus | 1.33e-11 | 2 |
digestive tract diverticulum | 3.18e-11 | 23 |
exocrine gland | 2.18e-10 | 31 |
exocrine system | 2.18e-10 | 31 |
epithelium of foregut-midgut junction | 2.99e-10 | 25 |
anatomical boundary | 2.99e-10 | 25 |
hepatobiliary system | 2.99e-10 | 25 |
foregut-midgut junction | 2.99e-10 | 25 |
septum transversum | 2.99e-10 | 25 |
gland | 3.21e-09 | 59 |
diencephalon | 2.16e-07 | 7 |
future diencephalon | 2.16e-07 | 7 |
abdomen element | 6.63e-07 | 54 |
abdominal segment element | 6.63e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.88e-08 | 106 |
disease of anatomical entity | 6.38e-08 | 39 |
disease of cellular proliferation | 4.53e-07 | 239 |