FFCP PHASE1:Hg19::chr3:87039544..87039558,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:87039544..87039558,-
|short_description=p@chr3:87039544..87039558,-
|description=CAGE_peak_at_chr3:87039544..87039558,-
|association_with_transcript=NA
|E...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:87039544..87039558,- | |||
|coexpression_cluster_id=C461 | |||
|description=CAGE_peak_at_chr3:87039544..87039558,- | |||
|id=chr3:87039544..87039558,- | |||
|ontology_enrichment_celltype=CL:0000057!5.37e-16!75;CL:0000055!1.42e-11!180;CL:0002620!3.78e-11!23;CL:0000188!1.23e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000511;7.74e-11;1!CL:0002625;7.74e-11;1!CL:0000216;7.74e-11;1!CL:0000228;2.07e-10;1!CL:0002372;2.07e-10;1!CL:0000056;5.20e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,8.14e-11,1;CL:0002625,8.14e-11,1;CL:0000216,8.14e-11,1;CL:0000228,1.57e-10,1;CL:0002372,1.57e-10,1;CL:0000515,4.76e-10,4 | |||
|ontology_enrichment_development_v019=CL:0000515;5.20e-10;4 | |||
|ontology_enrichment_disease=DOID:17!7.95e-07!5;DOID:450!7.95e-07!5;DOID:66!7.95e-07!5;DOID:423!7.95e-07!5;DOID:0080000!7.95e-07!5;DOID:11722!7.95e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:1325;3.14e-12;7!DOID:3904;3.14e-12;7!DOID:3371;7.74e-11;1!DOID:4549;7.74e-11;1!DOID:5861;7.74e-11;1!DOID:6496;7.74e-11;1!DOID:5409;5.20e-10;4!DOID:201;4.31e-07;6!DOID:0060100;4.31e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,3.15e-12,7;DOID:3904,3.15e-12,7;DOID:3371,7.40e-11,1;DOID:4549,7.40e-11,1;DOID:5861,7.40e-11,1;DOID:6496,7.40e-11,1;DOID:5409,5.71e-10,4;DOID:201,4.52e-07,6;DOID:0060100,4.52e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0004923!2.12e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;7.74e-11;1!UBERON:0001343;7.74e-11;1!UBERON:0004910;7.74e-11;1!UBERON:0004813;7.74e-11;1!UBERON:0007195;2.07e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,8.14e-11,1;UBERON:0001343,8.14e-11,1;UBERON:0004910,8.14e-11,1;UBERON:0005154,8.14e-11,1;UBERON:0005295,8.14e-11,1;UBERON:0004813,8.14e-11,1;UBERON:0005297,8.14e-11,1;UBERON:0005294,8.14e-11,1;UBERON:0010141,8.14e-11,1;UBERON:0005891,8.14e-11,1;UBERON:0007195,3.61e-10,1 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.422863212287913,0,0,0,0,0,0,0.737201809504527,0.697801167972428,0.436882744260345,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0.665188192387692,0.527008714158756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,1.45650098894541,0.860509862246441,0.709336764396714,1.12135520028461,0,0,0,0,0,0.151357427644931,0,0.937285727335186,0.312160076830321,0,0,0.117434498643765,0.323745888736263,0.421352420106746,0,0.122834317311768,0,0,0.247266929278557,0.910161361938026,0.718618141816238,0.168336113954066,0.125118519871964,0,0,0,0.300476117813194,0,0.538168907066586,0.427114777637135,0.635795703478686,1.80054657650641,0.412210116953756,0.257640540045629,0.18611685633159,0.843881661206331,0.487185025805993,0,0.276149695926898,0,0.710019185033229,0.604512589365842,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.821860859650752,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.22001485746285,0.387815147273333,0,0,0,1.04007436911366,0,0,0.266422179016099,0.142977993658148,0,0.823240336780769,0,0,0,0.301439377059586,0.871533458600294,0.299918973546171,0,0,0,0,0,1.42636905040718,1.15825045334063,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,1.32845119707087,0.368738337083406,0.521301686808497,0,0,0,0,0,0,0,0.30239029332968,0.992431231275107,0.460385919864187,0.280660094433074,0.512556597022804,0,0.804269605718038,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.232420756919918,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0.539107359730903,0,0,0.422206515571503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0,0,0,4.82051789532479,0.48335359146061,0.308097234229289,0.15350367472613,0.137836572484531,0.537101224341368,0.290033387828457,0.511359764496605,0.623224249527161,0.165284915360978,0,0.255225424989168,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0.744316738719335,0.949138274156178,0,0,0,0,0,0.539617372749944,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.196498082026242,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0.0898683511473268,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,1.41832609060762,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0.46112780877612,0,0,0.638002319463839,0.183195186803725,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.387025325156341,0.803982487948041,0,0,4.85408696803251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0.272406812223151,0.160753148465019,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0.157204305099666,0,0,0,0,0,0.544017803369474,0,0.612691153526923,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,1.63599316893057,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0.400027764663154,0,1.01024846629776,0,0,0.428883182749851,0,0.226705925512272,0.463044948647668,0.244736704506468,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,12.4767719442365,1.1441462864015,0,0,0.150420656698515,0,0,0,0.818859587550484,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.709618961301111,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0.521574816907738,1.60342272946051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,1.07028081699812,1.46829906650648,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0.0939839179798536,0,0,0,1.41157948686277,0,0,0,0,0,0,0,0,1.11598505450025,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,1.12131862580613,0,0,0,0,0,0.215166616178029,0,0,0.853818767021724,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0.856402095563933,0.422863212287913,0,0,0,0,0,0,0.737201809504527,0.697801167972428,0.436882744260345,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0.665188192387692,0.527008714158756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,1.45650098894541,0.860509862246441,0.709336764396714,1.12135520028461,0,0,0,0,0,0.151357427644931,0,0.937285727335186,0.312160076830321,0,0,0.117434498643765,0.323745888736263,0.421352420106746,0,0.122834317311768,0,0,0.247266929278557,0.910161361938026,0.718618141816238,0.168336113954066,0.125118519871964,0,0,0,0.300476117813194,0,0.538168907066586,0.427114777637135,0.635795703478686,1.80054657650641,0.412210116953756,0.257640540045629,0.18611685633159,0.843881661206331,0.487185025805993,0,0.276149695926898,0,0.710019185033229,0.604512589365842,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.821860859650752,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.22001485746285,0.387815147273333,0,0,0,1.04007436911366,0,0,0.266422179016099,0.142977993658148,0,0.823240336780769,0,0,0,0.301439377059586,0.871533458600294,0.299918973546171,0,0,0,0,0,1.42636905040718,1.15825045334063,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,1.32845119707087,0.368738337083406,0.521301686808497,0,0,0,0,0,0,0,0.30239029332968,0.992431231275107,0.460385919864187,0.280660094433074,0.512556597022804,0,0.804269605718038,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.232420756919918,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0.539107359730903,0,0,0.422206515571503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0,0,0,4.82051789532479,0.48335359146061,0.308097234229289,0.15350367472613,0.137836572484531,0.537101224341368,0.290033387828457,0.511359764496605,0.623224249527161,0.165284915360978,0,0.255225424989168,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0.744316738719335,0.949138274156178,0,0,0,0,0,0.539617372749944,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.196498082026242,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0.0898683511473268,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,1.41832609060762,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0.46112780877612,0,0,0.638002319463839,0.183195186803725,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.387025325156341,0.803982487948041,0,0,4.85408696803251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0.272406812223151,0.160753148465019,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0.157204305099666,0,0,0,0,0,0.544017803369474,0,0.612691153526923,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,1.63599316893057,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0.400027764663154,0,1.01024846629776,0,0,0.428883182749851,0,0.226705925512272,0.463044948647668,0.244736704506468,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,12.4767719442365,1.1441462864015,0,0,0.150420656698515,0,0,0,0.818859587550484,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.709618961301111,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0.521574816907738,1.60342272946051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,1.07028081699812,1.46829906650648,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0.0939839179798536,0,0,0,1.41157948686277,0,0,0,0,0,0,0,0,1.11598505450025,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,1.12131862580613,0,0,0,0,0,0.215166616178029,0,0,0.853818767021724,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:87039544..87039558,- | |||
}} | }} |
Latest revision as of 23:47, 29 July 2015
Short description: | p@chr3:87039544..87039558, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:87039544..87039558, - |
Coexpression cluster: | C461_oral_chorionic_squamous_amniotic_epidermoid_gall_bronchogenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 8.14e-11 | 1 |
seminiferous tubule epithelial cell | 8.14e-11 | 1 |
Sertoli cell | 8.14e-11 | 1 |
multinucleate cell | 1.57e-10 | 1 |
myotube | 1.57e-10 | 1 |
skeletal muscle myoblast | 4.76e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 8.14e-11 | 1 |
seminiferous tubule of testis | 8.14e-11 | 1 |
epithelium of male gonad | 8.14e-11 | 1 |
epithelial cord | 8.14e-11 | 1 |
sex cord | 8.14e-11 | 1 |
seminiferous tubule epithelium | 8.14e-11 | 1 |
testis sex cord | 8.14e-11 | 1 |
genital ridge | 8.14e-11 | 1 |
primitive sex cord of indifferent gonad | 8.14e-11 | 1 |
coelomic epithelium | 8.14e-11 | 1 |
stroma of bone marrow | 3.61e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 3.15e-12 | 7 |
bronchogenic carcinoma | 3.15e-12 | 7 |
chondrosarcoma | 7.40e-11 | 1 |
extraosseous chondrosarcoma | 7.40e-11 | 1 |
myxoid chondrosarcoma | 7.40e-11 | 1 |
extraskeletal myxoid chondrosarcoma | 7.40e-11 | 1 |
lung small cell carcinoma | 5.71e-10 | 4 |
connective tissue cancer | 4.52e-07 | 6 |
musculoskeletal system cancer | 4.52e-07 | 6 |