FFCP PHASE1:Hg19::chr4:106816241..106816260,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:106816241..106816260,+
|short_description=p4@NPNT
|description=CAGE_peak_4_at_NPNT_5end
|association_with_transcript=-333bp_to_ENST00000379987_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=255743 | |EntrezGene=255743 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27405 | |HGNC=27405 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UXI9 | |UniProt=Q6UXI9 | ||
|association_with_transcript=-333bp_to_ENST00000379987_5end | |||
|cluster_id=chr4:106816241..106816260,+ | |||
|coexpression_cluster_id=C2768 | |||
|description=CAGE_peak_4_at_NPNT_5end | |||
|id=chr4:106816241..106816260,+ | |||
|ontology_enrichment_celltype=CL:0002251!2.06e-08!21;CL:0000223!2.72e-08!59;CL:0002076!6.45e-07!43 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.39e-16;29!UBERON:0006595;9.24e-08;86 | |||
|ontology_enrichment_disease=DOID:305!5.28e-17!106;DOID:0050687!1.73e-09!143;DOID:299!5.32e-09!25;DOID:5093!5.56e-07!4;DOID:1612!5.56e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.95e-11;4!DOID:1612;1.95e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.25e-11,4;DOID:1612,2.25e-11,4;DOID:305,4.63e-11,106;DOID:0050687,4.00e-07,143 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001737;1.36e-30;9!UBERON:0001557;1.36e-30;9!UBERON:0000065;8.82e-10;44!UBERON:0000007;1.09e-09;2!UBERON:0002108;1.10e-08;4!UBERON:0000160;2.61e-08;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.11e-31,9;UBERON:0001557,1.63e-17,19;UBERON:0008947,2.73e-12,38;UBERON:0003258,2.73e-12,38;UBERON:0001007,6.87e-11,145;UBERON:0001555,6.87e-11,145;UBERON:0007026,6.87e-11,145;UBERON:0004921,2.49e-10,118;UBERON:0000065,1.53e-09,54;UBERON:0000007,1.62e-09,2;UBERON:0004119,2.13e-09,160;UBERON:0000925,2.13e-09,160;UBERON:0006595,2.13e-09,160;UBERON:0002108,1.27e-08,4;UBERON:0000160,2.22e-08,17 | |||
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|short_description=p4@NPNT | |||
}} | }} |
Latest revision as of 06:46, 20 September 2015
Short description: | p4@NPNT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NPNT_5end |
Coexpression cluster: | C2768_thyroid_throat_aorta_cervical_small_lung_mesothelioma |
Association with transcript: | -333bp_to_ENST00000379987_5end |
EntrezGene: | NPNT |
HGNC: | 27405 |
UniProt: | Q6UXI9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 6.11e-31 | 9 |
upper respiratory tract | 1.63e-17 | 19 |
respiratory primordium | 2.73e-12 | 38 |
endoderm of foregut | 2.73e-12 | 38 |
digestive system | 6.87e-11 | 145 |
digestive tract | 6.87e-11 | 145 |
primitive gut | 6.87e-11 | 145 |
subdivision of digestive tract | 2.49e-10 | 118 |
respiratory tract | 1.53e-09 | 54 |
pituitary gland | 1.62e-09 | 2 |
endoderm-derived structure | 2.13e-09 | 160 |
endoderm | 2.13e-09 | 160 |
presumptive endoderm | 2.13e-09 | 160 |
small intestine | 1.27e-08 | 4 |
intestine | 2.22e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.25e-11 | 4 |
breast cancer | 2.25e-11 | 4 |
carcinoma | 4.63e-11 | 106 |
cell type cancer | 4.00e-07 | 143 |