FFCP PHASE1:Hg19::chr4:114683412..114683431,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:114683412..114683431,-
|short_description=p10@CAMK2D
|description=CAGE_peak_10_at_CAMK2D_5end
|association_with_transcript=-329bp_to_ENST00000296402,ENST00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=817 | |EntrezGene=817 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1462 | |HGNC=1462 | ||
|TSSclassifier=strong | |||
|UniProt=Q13557 | |UniProt=Q13557 | ||
|association_with_transcript=-329bp_to_ENST00000296402,ENST00000394526,ENST00000418639,ENST00000429180,ENST00000454265,NM_001221,NM_172114,NM_172115,NM_172127,NM_172128,NM_172129,uc003ibi.2,uc003ibj.2,uc003ibk.2,uc003ibl.2,uc003ibm.2,uc003ibn.2,uc003ibo.3_5end | |||
|cluster_id=chr4:114683412..114683431,- | |||
|coexpression_cluster_id=C1053 | |||
|description=CAGE_peak_10_at_CAMK2D_5end | |||
|id=chr4:114683412..114683431,- | |||
|ontology_enrichment_celltype=CL:0000542!1.60e-32!53;CL:0000051!1.60e-32!53;CL:0000838!5.48e-32!52;CL:0002087!2.01e-24!119;CL:0000738!8.83e-20!140;CL:0002031!1.89e-19!124;CL:0000084!1.09e-16!25;CL:0000827!1.09e-16!25;CL:0000791!1.37e-14!18;CL:0000789!1.37e-14!18;CL:0002420!1.37e-14!18;CL:0002419!1.37e-14!18;CL:0000790!1.37e-14!18;CL:0000945!5.17e-14!24;CL:0000826!5.17e-14!24;CL:0000988!8.49e-13!182;CL:0000037!2.01e-12!172;CL:0000566!2.01e-12!172;CL:0002032!1.27e-11!165;CL:0000837!1.27e-11!165;CL:0000236!3.30e-10!14;CL:0000625!2.81e-09!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.44e-39;18!CL:0000789;4.44e-39;18!CL:0002419;4.44e-39;18!CL:0000542;9.56e-37;53!CL:0000084;3.05e-36;25!CL:0000236;1.22e-26;13!CL:0000945;8.85e-24;24!CL:0000625;1.05e-23;11!CL:0000624;2.94e-15;6!CL:0002087;1.67e-10;104!CL:0000623;2.84e-08;3!CL:0000898;2.94e-08;3!CL:0000226;2.18e-07;3!CL:0000842;2.18e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.42e-65,52;CL:0000542,4.20e-64,53;CL:0000051,4.20e-64,53;CL:0000791,4.67e-39,18;CL:0000789,4.67e-39,18;CL:0002420,4.67e-39,18;CL:0002419,4.67e-39,18;CL:0000790,4.67e-39,18;CL:0000084,3.54e-36,25;CL:0000827,3.54e-36,25;CL:0002087,1.01e-31,115;CL:0000738,3.33e-26,136;CL:0002031,2.36e-25,120;CL:0000236,1.34e-24,14;CL:0000945,8.59e-24,24;CL:0000826,8.59e-24,24;CL:0000625,1.02e-23,11;CL:0000988,1.66e-21,177;CL:0000037,7.88e-20,168;CL:0002032,6.91e-17,161;CL:0000837,6.91e-17,161;CL:0000624,2.67e-15,6;CL:0000623,2.13e-08,3;CL:0000825,2.13e-08,3;CL:0000898,2.65e-08,3;CL:0000226,2.22e-07,3;CL:0000842,2.22e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;4.44e-39;18!CL:0000051;9.56e-37;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.16e-07!15;UBERON:0000179!2.16e-07!15;UBERON:0000463!2.16e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.29e-13;15!UBERON:0000179;3.29e-13;15!UBERON:0000463;3.29e-13;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.47e-13,15;UBERON:0000179,4.47e-13,15;UBERON:0000463,4.47e-13,15 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,1.0007329835313,0,0,0,0,0,0,0,0.218441372130172,0,0.247532705920093,0,0,0,0,0,0,0.408001382488506,0,0.286235987131057,0.136874425072884,0.627713197974014,4.27915072188527,3.9408282935974,3.14843125254717,0.393364276848904,0.383829398097213,0.77408061658038,0,0,0,0.92960640696362,0.710846162437108,0,1.66198622559563,1.40381113229099,0.868043482863407,0.223915474239924,0.32389366601898,0.515151135268373,0.290796477559129,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0.512321413058201,0.236482229888585,0,0,1.35426486594342,0,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0.211255286311942,0,0.209658645508376,0,0.300353785683013,0,0,0,0.182664153764634,5.27988733383968,4.36910889009705,8.89509253863555,3.84057200309856,4.80475184443215,5.74752439954483,3.30522436392431,2.86216126360609,10.2458334439701,5.87237189370939,8.02773779062981,0,1.12101712596307,0,4.72103448273199,6.28817220398664,4.31763147898969,2.84217042164153,4.56291173287027,4.73447805734733,3.89653456815823,2.78526142212934,4.41908861212256,2.65840673500345,4.06205795647523,3.33037431286755,3.38154303655683,2.95988228286617,2.48715016007264,1.44901542867526,3.55887751588945,4.28065324943541,0,1.81294948316106,2.68254345521345,2.40539211837841,1.77113784413652,3.18565414324097,3.25541726928209,1.90090408889675,2.40920190524436,2.04778577847069,1.24930726552346,1.4206635122641,3.28451198768419,2.62088766192152,3.4767225451856,4.92402973201517,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0,0.522389211897802,0.398873881556595,0,0,0,0,1.72046919021225,0,0,0,0,0,0,0.71153252537342,0,0,0,0,0,0,0,0,0.112611480483322,0,1.89853131913626,0,0,0,0,0,0,0.662045904066094,0.286836620748814,0,0,0,0,0,0.134710672069688,0.490385709340376,0.454072282934794,0,0,0.312160076830321,0.570471821544449,0,0.469737994575059,0,0.280901613404497,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0.538168907066586,0,0.211931901159562,1.20036438433761,0,0.257640540045629,0,0.168776332241266,0.0974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,0.710019185033229,0.201504196455281,0,0,0.272746120590835,0,0.243947412259191,0,0.116193942869518,0,0,0.36497735907583,0,1.28648187638577,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0.38474715694639,0,1.40241773803446,0,0,0,0,0,1.7658523976586,0,0.171567810298526,0,1.1240175325762,0,0,0,0,0,0.34779121492523,0.234817388471643,0.144366447761074,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0,0,0.268675568108545,0,0,0,0,0.414656231081544,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0.224262168690721,0,0.2933531432838,0,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0.144781306667579,0.410952645100767,0.179060963239896,1.2329365839288,3.54655368363469,3.88129634747131,4.87703537863044,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0.178428988797162,0.157702415033935,0.585707074963566,0.902838299183157,0,0,0,0,0.0868836144680828,0,0,2.27444828735176,1.72571360654893,2.02782359826544,0,0,0,0,0.153461973288062,0,0.384417447767103,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0.229628896329213,0.364182336013434,0.131124414959424,0,0,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.412164046590889,0.457847324091717,1.07262349896764,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0,0,0.165284915360978,0,0.510450849978337,0.2023155617111,0,0,0,0.924100740528266,0.532306030317022,0,0,0.143124886741991,1.116475108079,0.632758849437452,0.190630193923825,0.511795582622668,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0.6196469961995,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0.192444225451024,0,0,0.0941438007767792,0.43050537267123,0,0,0,0.507447609232169,0,1.13929437434833,0.476463550915578,1.23408681925858,2.59389324477087,0.540031437238115,2.37937552888281,0.213648142254946,0,0,0.743212700502875,0,0.782560276832555,1.27541018183058,0.199579371432817,0,0,0,0,1.59764275323235,0,0,0,0,0,0.425846237690326,0.343505344755765,0.921722292925374,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0,0.659215496907038,0,0,1.38141957765574,0.503865495708552,0.511343412510774,0.369254416383208,0.622079175323615,0,0,0,0.197286811273867,0,0,0,0.278304294485554,0,0,0,0,0.1137934482855,0.762760950878299,0,0,0,0,0,0.120596438625408,1.52581736317083,0.331737779793674,0.886642856860642,0.219385397153973,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,1.02193298195737,0.156980256395025,0,0,0,0,0,0,0.421996129056054,0,0.141353071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| 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| ||
|short_description=p10@CAMK2D | |||
}} | }} |
Latest revision as of 19:32, 24 September 2015
Short description: | p10@CAMK2D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CAMK2D_5end |
Coexpression cluster: | C1053_CD19_CD4_Natural_CD8_Peripheral_granulocyte_tonsil |
Association with transcript: | -329bp_to_ENST00000296402, ENST00000394526, ENST00000418639, ENST00000429180, ENST00000454265, NM_001221, NM_172114, NM_172115, NM_172127, NM_172128, NM_172129, uc003ibi.2, uc003ibj.2, uc003ibk.2, uc003ibl.2, uc003ibm.2, uc003ibn.2, uc003ibo.3_5end |
EntrezGene: | CAMK2D |
HGNC: | 1462 |
UniProt: | Q13557 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.42e-65 | 52 |
lymphocyte | 4.20e-64 | 53 |
common lymphoid progenitor | 4.20e-64 | 53 |
mature alpha-beta T cell | 4.67e-39 | 18 |
alpha-beta T cell | 4.67e-39 | 18 |
immature T cell | 4.67e-39 | 18 |
mature T cell | 4.67e-39 | 18 |
immature alpha-beta T cell | 4.67e-39 | 18 |
T cell | 3.54e-36 | 25 |
pro-T cell | 3.54e-36 | 25 |
nongranular leukocyte | 1.01e-31 | 115 |
leukocyte | 3.33e-26 | 136 |
hematopoietic lineage restricted progenitor cell | 2.36e-25 | 120 |
B cell | 1.34e-24 | 14 |
lymphocyte of B lineage | 8.59e-24 | 24 |
pro-B cell | 8.59e-24 | 24 |
CD8-positive, alpha-beta T cell | 1.02e-23 | 11 |
hematopoietic cell | 1.66e-21 | 177 |
hematopoietic stem cell | 7.88e-20 | 168 |
hematopoietic oligopotent progenitor cell | 6.91e-17 | 161 |
hematopoietic multipotent progenitor cell | 6.91e-17 | 161 |
CD4-positive, alpha-beta T cell | 2.67e-15 | 6 |
natural killer cell | 2.13e-08 | 3 |
pro-NK cell | 2.13e-08 | 3 |
naive T cell | 2.65e-08 | 3 |
single nucleate cell | 2.22e-07 | 3 |
mononuclear cell | 2.22e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 4.47e-13 | 15 |
haemolymphatic fluid | 4.47e-13 | 15 |
organism substance | 4.47e-13 | 15 |