FFCP PHASE1:Hg19::chr4:138453559..138453572,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:138453559..138453572,-
|short_description=p2@PCDH18
|description=CAGE_peak_2_at_PCDH18_5end
|association_with_transcript=0bp_to_ENST00000511115_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54510 | |EntrezGene=54510 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14268 | |HGNC=14268 | ||
|TSSclassifier=strong | |||
|UniProt=B4DLR6 | |UniProt=B4DLR6 | ||
|association_with_transcript=0bp_to_ENST00000511115_5end | |||
|cluster_id=chr4:138453559..138453572,- | |||
|coexpression_cluster_id=C4371 | |||
|description=CAGE_peak_2_at_PCDH18_5end | |||
|id=chr4:138453559..138453572,- | |||
|ontology_enrichment_celltype=CL:0000055!1.25e-24!180;CL:0000057!6.28e-21!75;CL:0002620!1.98e-12!23;CL:0000136!4.96e-08!15;CL:0000680!3.08e-07!57;CL:0000056!3.08e-07!57;CL:0000355!3.08e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.17e-15;23!CL:0000057;9.40e-10;73!CL:0002552;5.82e-08;5!CL:0000136;9.03e-08;13!CL:0002556;1.84e-07;6!CL:0002320;1.84e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.72e-23,76;CL:0002620,3.48e-15,23;CL:0000136,4.77e-10,15;CL:0000048,2.50e-09,427;CL:0002320,2.78e-09,361;CL:0000723,7.70e-09,433;CL:0000034,3.24e-08,441;CL:0002552,6.22e-08,5;CL:0000134,1.01e-07,354;CL:0002556,2.50e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;5.90e-08;5!DOID:450;5.90e-08;5!DOID:66;5.90e-08;5!DOID:423;5.90e-08;5!DOID:0080000;5.90e-08;5!DOID:11722;5.90e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.27e-08,5;DOID:450,7.27e-08,5;DOID:66,7.27e-08,5;DOID:423,7.27e-08,5;DOID:0080000,7.27e-08,5;DOID:11722,7.27e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!3.95e-12!95;UBERON:0000914!1.34e-10!83;UBERON:0002329!1.34e-10!83;UBERON:0003077!1.34e-10!83;UBERON:0003059!1.34e-10!83;UBERON:0007282!1.34e-10!83;UBERON:0009618!1.34e-10!83;UBERON:0007285!1.34e-10!83;UBERON:0000475!1.74e-10!365;UBERON:0000468!2.57e-08!659;UBERON:0002199!2.76e-08!45;UBERON:0002416!2.76e-08!45;UBERON:0004290!6.97e-08!70;UBERON:0002097!2.00e-07!40;UBERON:0002385!3.17e-07!63;UBERON:0001015!3.17e-07!63;UBERON:0000383!3.17e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;4.62e-09;41!UBERON:0002199;2.81e-08;46!UBERON:0002416;2.81e-08;46!UBERON:0002384;3.40e-08;198!UBERON:0000075;4.91e-08;16!UBERON:0004457;5.70e-08;9!UBERON:0000042;5.70e-08;9!UBERON:0001758;1.84e-07;6!UBERON:0003672;1.84e-07;6!UBERON:0003688;2.81e-07;6!UBERON:0002358;2.81e-07;6!UBERON:0003684;2.81e-07;6!UBERON:0001178;2.81e-07;6!UBERON:0000165;3.86e-07;28!UBERON:0000160;4.36e-07;17!UBERON:0001555;6.88e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.43e-18,99;UBERON:0002199,1.36e-11,46;UBERON:0002416,1.36e-11,46;UBERON:0002097,1.44e-11,41;UBERON:0002384,2.65e-09,371;UBERON:0000075,6.38e-08,16;UBERON:0000165,9.83e-08,29;UBERON:0000930,9.83e-08,29;UBERON:0003688,2.05e-07,6;UBERON:0002358,2.05e-07,6;UBERON:0003684,2.05e-07,6;UBERON:0001178,2.05e-07,6;UBERON:0000160,2.47e-07,17;UBERON:0001758,2.50e-07,6;UBERON:0003672,2.50e-07,6;UBERON:0000161,2.80e-07,36 | |||
|phase1_expression=5.26867299884614,4.06790995392868,4.65149533516705,3.00219895059391,1.34088328328186,1.74467704820074,2.53299878168311,1.26343974685366,0,0.245733936501509,0,0,0,3.7129905888014,2.31978163009541,0.672325146451775,0,0.730310090387373,0.487932798790507,0.369363174230364,0,0,0,0,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0,2.50668955317945,1.44846518960824,0.795285947051099,0.486634870302636,0.283604451492204,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.886413581652058,0.264818361626438,5.16305917347865,2.12801029319014,0,0,0.24666754841716,1.8672662123986,0.134710672069688,0.163461903113459,1.66493170409425,3.45705554687999,0.937285727335186,0.936480230490962,0,1.94283284717341,0.587172493218824,1.13311061057692,0.561803226808994,4.08308342509786,4.66770405784718,7.12947890112782,16.6320400019487,6.18167323196392,0,0,4.04006673489759,3.00284447692714,3.04770527032601,1.31693286264251,1.5324389789951,4.20666564938471,0.226864366320042,17.5801842975085,4.27114777637135,4.02670612203168,26.107925359343,4.32820622801443,10.8209026819164,3.53622027030021,29.3670818099803,17.3437869186934,24.233642327435,6.07529331039176,8.72888706821584,19.8805371809304,7.45565526884538,4.57813599238317,0,0,0,0.121973706129595,0.265059536642971,0.116193942869518,0.725627385107593,0.252320850875628,0.72995471815166,0,3.21620469096443,1.38134921352481,5.10804720835177,4.33127689001751,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0.343135620597051,0,0,0,0.185176890317059,0.325808305310325,0,0,0.927443239800615,1.17408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.2933531432838,0.775630294546667,0,0,17.0200394614317,9.36066932202295,0.257207374262142,0,0,37.4602343384347,1.62786481617433,0.823240336780769,0.325736184293735,33.4068431817993,0,0,0,0,0,0,0,0.479249710983165,1.14861935834114,0,0.868687840005475,1.02738161275192,0.358121926479791,0,0,0,0,0.508189248444927,1.30139853857622,0,0,0,0,0,0,9.56993635409291,3.00102312635806,0,1.66376689224646,1.78428988797162,0.630809660135739,0.702848489956279,3.31040709700491,0,3.10419213877515,2.65690239414175,1.47495334833363,7.81952530212746,0.391602314925481,1.02943027143257,0,0,0,0,0,0.30239029332968,4.96215615637554,15.8065832486704,9.5424432107245,1.92208723883551,6.14048698880044,1.60853921143608,0,0.771048469013278,0.532685175939381,2.05317890034523,2.07701771673448,0.929683027679674,0,0,0,2.29628896329214,2.91345868810747,5.24497659837697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62689197332152,0.9273691048295,0.54941678891006,0.742585499285292,0,0,0,1.16004861950546,0.308097234229289,0.460511024178389,0.137836572484531,1.28904293841928,1.30515024522806,0.426133137080504,0.890320356467374,0,0,0,0,0,2.51849877464512,1.3940745403212,0.924100740528266,0.532306030317022,0,0.37064843820784,0.429374660225974,1.86079184679834,0,0.571890581771475,0.255897791311334,7.70290178461057,0.636406495851874,0,18.5268631310814,5.76527762445715,4.47687128913608,0,0,0,0.975267478179181,0,0,11.1929927354548,2.2624869112594,0,0.551365343546124,0.66343897524122,0,1.15755106853338,7.87073702455959,0,0.92947049429925,0.281695602532241,0.573645408816206,0.88424136911809,0,4.61189383291777,2.32218398827431,0.987884678879706,0,2.44954304171488,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0.557216921387392,0,0,0,0,0,0,0.222617410045812,0,0,0.996239941255349,0.828851746593443,0,0.20453736500431,0,5.28767299025073,0,0,0,1.7755813014648,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591095237907095,0.219385397153973,0,0,1.38510465306835,0,0,0,0,0,6.04544116452291,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,1.85760885457012,2.4441205797345,0,0.123563938946503,0,0.606610196826093,0,0,0,0,0,0.394584402849391,0,0.61214552326098,1.13735843331278,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,1.35784623083787,21.7110071661091,1.80784592624426,0,0,0.569797163602908,0,0,5.33632486848381,0.19980960958213,0,82.4663492394593,0,0,0,0,0,0,4.99791266417977,0.577901179803038,0,0.273810757783986,0,0,0,0.558564802544508,0.458320848023367,0,0.199679000498991,0,0,0.470284307407084,0.360299883542404,0,0,0,0,0,0,0,0,0,0.550157746388935,0,0,0,0.0607495566580247,0,0.0788057072991982,0.83927341015997,0.105600336519406,0,0,0.714695326373367,0.662091970365432,0,1.08599920350743,0.864221491201268,3.26587360109409,0,0,0.340776043570843,0,0.732761168390412,0,0.129282956361551,0.13223260174269,0,0,0,4.87333345808964,0,0.992332043623902,0,0,0,1.08803560673895,1.7548292581589,0.612691153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| ||
|short_description=p2@PCDH18 | |||
}} | }} |
Latest revision as of 05:16, 25 September 2015
Short description: | p2@PCDH18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PCDH18_5end |
Coexpression cluster: | C4371_Fibroblast_gastric_normal_Mesenchymal_Nucleus_Preadipocyte_mesenchymal |
Association with transcript: | 0bp_to_ENST00000511115_5end |
EntrezGene: | PCDH18 |
HGNC: | 14268 |
UniProt: | B4DLR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.72e-23 | 76 |
skin fibroblast | 3.48e-15 | 23 |
fat cell | 4.77e-10 | 15 |
multi fate stem cell | 2.50e-09 | 427 |
connective tissue cell | 2.78e-09 | 361 |
somatic stem cell | 7.70e-09 | 433 |
stem cell | 3.24e-08 | 441 |
fibroblast of gingiva | 6.22e-08 | 5 |
mesenchymal cell | 1.01e-07 | 354 |
fibroblast of periodontium | 2.50e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
surface structure | 4.43e-18 | 99 |
integument | 1.36e-11 | 46 |
integumental system | 1.36e-11 | 46 |
skin of body | 1.44e-11 | 41 |
connective tissue | 2.65e-09 | 371 |
subdivision of skeletal system | 6.38e-08 | 16 |
mouth | 9.83e-08 | 29 |
stomodeum | 9.83e-08 | 29 |
omentum | 2.05e-07 | 6 |
peritoneum | 2.05e-07 | 6 |
abdominal cavity | 2.05e-07 | 6 |
visceral peritoneum | 2.05e-07 | 6 |
intestine | 2.47e-07 | 17 |
periodontium | 2.50e-07 | 6 |
dentition | 2.50e-07 | 6 |
orifice | 2.80e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.27e-08 | 5 |
myotonic disease | 7.27e-08 | 5 |
muscle tissue disease | 7.27e-08 | 5 |
myopathy | 7.27e-08 | 5 |
muscular disease | 7.27e-08 | 5 |
myotonic dystrophy | 7.27e-08 | 5 |