FFCP PHASE1:Hg19::chr4:41937231..41937252,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:41937231..41937252,+
|short_description=p2@TMEM33
|description=CAGE_peak_2_at_TMEM33_5end
|association_with_transcript=62bp_to_ENST00000325094_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55161 | |EntrezGene=55161 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25541 | |HGNC=25541 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=62bp_to_ENST00000325094_5end | |||
|cluster_id=chr4:41937231..41937252,+ | |||
|description=CAGE_peak_2_at_TMEM33_5end | |||
|id=chr4:41937231..41937252,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.96e-23!254;CL:0000223!2.22e-17!59;CL:0002076!1.66e-13!43;CL:0002251!2.08e-08!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.46e-11;42!CL:0002251;1.11e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.77e-24,253;CL:0000223,1.49e-18,58;CL:0002076,1.51e-14,42;CL:0002251,1.48e-09,20 | |||
|ontology_enrichment_development_v019=CL:0000223;1.78e-09;58!UBERON:0001041;2.37e-07;30 | |||
|ontology_enrichment_disease=DOID:14566!3.04e-24!239;DOID:0050687!4.54e-24!143;DOID:305!8.71e-24!106;DOID:162!8.73e-24!235;DOID:0050686!3.29e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:305;5.74e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.34e-24,239;DOID:0050687,5.81e-24,143;DOID:162,6.77e-24,235;DOID:305,9.25e-24,106;DOID:0050686,2.85e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.08e-15!169;UBERON:0000925!1.08e-15!169;UBERON:0006595!1.08e-15!169;UBERON:0004921!4.87e-15!129;UBERON:0004185!4.87e-15!129;UBERON:0001007!5.87e-15!155;UBERON:0001555!5.87e-15!155;UBERON:0007026!5.87e-15!155;UBERON:0000077!1.48e-12!130;UBERON:0001041!1.60e-12!98;UBERON:0005911!1.82e-09!82;UBERON:0001004!2.37e-09!72;UBERON:0000065!1.99e-07!53;UBERON:0008947!8.29e-07!38;UBERON:0003258!8.29e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0004807;7.81e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,4.91e-14,118;UBERON:0004119,8.38e-14,160;UBERON:0000925,8.38e-14,160;UBERON:0006595,8.38e-14,160;UBERON:0001007,1.86e-13,145;UBERON:0001555,1.86e-13,145;UBERON:0007026,1.86e-13,145;UBERON:0001041,1.43e-11,87;UBERON:0005911,1.41e-09,82;UBERON:0001004,2.35e-08,74;UBERON:0011216,3.25e-07,223;UBERON:0000065,7.51e-07,54;UBERON:0008947,8.99e-07,38;UBERON:0003258,8.99e-07,38 | |||
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| ||
|short_description=p2@TMEM33 | |||
}} | }} |
Latest revision as of 20:02, 17 September 2015
Short description: | p2@TMEM33 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMEM33_5end |
Coexpression cluster: | NA |
Association with transcript: | 62bp_to_ENST00000325094_5end |
EntrezGene: | TMEM33 |
HGNC: | 25541 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.77e-24 | 253 |
endodermal cell | 1.49e-18 | 58 |
endo-epithelial cell | 1.51e-14 | 42 |
epithelial cell of alimentary canal | 1.48e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 4.91e-14 | 118 |
endoderm-derived structure | 8.38e-14 | 160 |
endoderm | 8.38e-14 | 160 |
presumptive endoderm | 8.38e-14 | 160 |
digestive system | 1.86e-13 | 145 |
digestive tract | 1.86e-13 | 145 |
primitive gut | 1.86e-13 | 145 |
foregut | 1.43e-11 | 87 |
endo-epithelium | 1.41e-09 | 82 |
respiratory system | 2.35e-08 | 74 |
organ system subdivision | 3.25e-07 | 223 |
respiratory tract | 7.51e-07 | 54 |
respiratory primordium | 8.99e-07 | 38 |
endoderm of foregut | 8.99e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.34e-24 | 239 |
cell type cancer | 5.81e-24 | 143 |
cancer | 6.77e-24 | 235 |
carcinoma | 9.25e-24 | 106 |
organ system cancer | 2.85e-08 | 137 |