FFCP PHASE1:Hg19::chr4:75554137..75554144,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:75554137..75554144,-
|short_description=p@chr4:75554137..75554144,-
|description=CAGE_peak_at_chr4:75554137..75554144,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:75554137..75554144,- | |||
|description=CAGE_peak_at_chr4:75554137..75554144,- | |||
|id=chr4:75554137..75554144,- | |||
|ontology_enrichment_celltype=CL:0002057!1.12e-63!42;CL:0000860!1.08e-58!45;CL:0002009!8.64e-39!65;CL:0002194!5.01e-38!63;CL:0000576!5.01e-38!63;CL:0000040!5.01e-38!63;CL:0000559!5.01e-38!63;CL:0000766!4.35e-36!76;CL:0000557!1.22e-34!71;CL:0000839!3.21e-33!70;CL:0000763!1.48e-26!112;CL:0000049!1.48e-26!112;CL:0002087!2.69e-21!119;CL:0000738!3.70e-21!140;CL:0002031!1.06e-18!124;CL:0000037!6.82e-18!172;CL:0000566!6.82e-18!172;CL:0002032!4.72e-17!165;CL:0000837!4.72e-17!165;CL:0000988!3.17e-16!182;CL:0000244!1.69e-10!4;CL:0000731!1.69e-10!4;CL:0000767!6.40e-08!3;CL:0000063!1.63e-07!578;CL:0000134!2.48e-07!358;CL:0002231!3.62e-07!3;CL:0002320!6.08e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.07e-88;33!CL:0002057;2.07e-88;33!CL:0000473;4.83e-59;39!CL:0000234;4.83e-59;39!CL:0000576;1.66e-45;48!CL:0000766;1.69e-23;69!CL:0000244;9.12e-13;4!CL:0000731;9.12e-13;4!CL:0002087;3.12e-12;104!CL:0000763;2.21e-11;100!CL:0000738;1.66e-08;136!CL:0000767;8.87e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.39e-80,42;CL:0002057,2.39e-80,42;CL:0000473,1.29e-69,48;CL:0000234,1.29e-69,48;CL:0002194,1.39e-54,59;CL:0000576,1.39e-54,59;CL:0000040,1.39e-54,59;CL:0000559,1.39e-54,59;CL:0002009,1.21e-52,61;CL:0000766,2.89e-51,72;CL:0000839,2.67e-48,66;CL:0000557,1.65e-47,67;CL:0000763,2.16e-32,108;CL:0000049,2.16e-32,108;CL:0002087,9.14e-28,115;CL:0000738,1.33e-26,136;CL:0002031,3.03e-24,120;CL:0000037,2.04e-20,168;CL:0002032,7.38e-20,161;CL:0000837,7.38e-20,161;CL:0000988,4.46e-19,177;CL:0000244,1.12e-12,4;CL:0000731,1.12e-12,4;CL:0000767,1.06e-07,3;CL:0000134,2.85e-07,354;CL:0002320,5.18e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.00e-59;42!CL:0000049;8.56e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.39e-29!80;UBERON:0001474!8.43e-27!86;UBERON:0002390!2.63e-25!102;UBERON:0003061!2.63e-25!102;UBERON:0004765!1.17e-22!101;UBERON:0001434!1.17e-22!101;UBERON:0002193!4.54e-22!112;UBERON:0002405!4.41e-21!115;UBERON:0002204!1.51e-10!167;UBERON:0003081!3.11e-10!216;UBERON:0000365!2.25e-08!5;UBERON:0005910!5.89e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;2.61e-10;5!UBERON:0005910;1.15e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.65e-41,76;UBERON:0001474,6.51e-38,82;UBERON:0004765,4.35e-34,90;UBERON:0002390,1.60e-33,98;UBERON:0003061,1.60e-33,98;UBERON:0002405,8.04e-33,93;UBERON:0001434,3.71e-30,100;UBERON:0002193,6.42e-30,108;UBERON:0002204,6.84e-16,167;UBERON:0003081,2.68e-13,203;UBERON:0000365,3.07e-10,5;UBERON:0005910,1.31e-08,6;UBERON:0000926,2.57e-07,315;UBERON:0004120,2.57e-07,315;UBERON:0006603,2.57e-07,315 | |||
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| ||
|short_description=p@chr4:75554137..75554144,- | |||
}} | }} |
Latest revision as of 06:50, 30 July 2015
Short description: | p@chr4:75554137..75554144, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:75554137..75554144, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.39e-80 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.39e-80 | 42 |
defensive cell | 1.29e-69 | 48 |
phagocyte | 1.29e-69 | 48 |
monopoietic cell | 1.39e-54 | 59 |
monocyte | 1.39e-54 | 59 |
monoblast | 1.39e-54 | 59 |
promonocyte | 1.39e-54 | 59 |
macrophage dendritic cell progenitor | 1.21e-52 | 61 |
myeloid leukocyte | 2.89e-51 | 72 |
myeloid lineage restricted progenitor cell | 2.67e-48 | 66 |
granulocyte monocyte progenitor cell | 1.65e-47 | 67 |
myeloid cell | 2.16e-32 | 108 |
common myeloid progenitor | 2.16e-32 | 108 |
nongranular leukocyte | 9.14e-28 | 115 |
leukocyte | 1.33e-26 | 136 |
hematopoietic lineage restricted progenitor cell | 3.03e-24 | 120 |
hematopoietic stem cell | 2.04e-20 | 168 |
hematopoietic oligopotent progenitor cell | 7.38e-20 | 161 |
hematopoietic multipotent progenitor cell | 7.38e-20 | 161 |
hematopoietic cell | 4.46e-19 | 177 |
transitional epithelial cell | 1.12e-12 | 4 |
urothelial cell | 1.12e-12 | 4 |
basophil | 1.06e-07 | 3 |
mesenchymal cell | 2.85e-07 | 354 |
connective tissue cell | 5.18e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.65e-41 | 76 |
bone element | 6.51e-38 | 82 |
skeletal element | 4.35e-34 | 90 |
hematopoietic system | 1.60e-33 | 98 |
blood island | 1.60e-33 | 98 |
immune system | 8.04e-33 | 93 |
skeletal system | 3.71e-30 | 100 |
hemolymphoid system | 6.42e-30 | 108 |
musculoskeletal system | 6.84e-16 | 167 |
lateral plate mesoderm | 2.68e-13 | 203 |
urothelium | 3.07e-10 | 5 |
transitional epithelium | 1.31e-08 | 6 |
mesoderm | 2.57e-07 | 315 |
mesoderm-derived structure | 2.57e-07 | 315 |
presumptive mesoderm | 2.57e-07 | 315 |