FFCP PHASE1:Hg19::chr4:88932492..88932496,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:88932492..88932496,+
|short_description=p@chr4:88932492..88932496,+
|description=CAGE_peak_at_chr4:88932492..88932496,+
|association_with_transcript=NA
|E...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:88932492..88932496,+ | |||
|description=CAGE_peak_at_chr4:88932492..88932496,+ | |||
|id=chr4:88932492..88932496,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002581;5.29e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,2.84e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.29e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;5.29e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,8.99e-10,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.29e-10;1!UBERON:0001785;5.29e-10;1!UBERON:0002464;5.29e-10;1!UBERON:0004904;5.29e-10;1!UBERON:0001021;5.29e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.10e-10,1;UBERON:0001785,3.10e-10,1;UBERON:0002464,3.10e-10,1;UBERON:0004904,3.10e-10,1;UBERON:0001021,3.10e-10,1;UBERON:0003902,3.10e-10,1;UBERON:0005425,3.10e-10,1 | |||
|phase1_expression=0,0.214100523890983,0,1.0007329835313,0,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.251085279189606,0.229240217243854,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0.568676929949686,0.293600439334847,1.10799081706375,0.401088894940283,0,0.447830948479849,0,0,0.145398238779565,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0.320929027076094,2.55734850319616,0,0,0,0,0.56738522469114,0.622822248995575,0.251248665256743,0,0,0,0,0,0,0,0.419317291016752,0.112328631146495,0.150176892841506,0,0.570025487482497,0.19891667719909,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0.790152254325231,0,0.786021525498329,0,0.668745981562712,0,0,0,0.334231370655521,0.589211814949674,0.221533894583621,0.812411591295047,1.40900451698243,3.38154303655683,0.328875809207352,0.552700035571697,1.15921234294021,0.296573126324121,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0.50133791063589,0,0,0.973269740605272,0.189069634328136,0.221729397462564,0.175669571386252,0.130979075497713,0,0,1.29818957461873,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0.286836620748814,0,0.560677600142307,0,0,0,0,0.163461903113459,0.151357427644931,0.576175924479999,0,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0.421352420106746,0.408308342509787,0.859840221182376,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0.505008341862199,0.125118519871964,0.277064115484183,0,0,0,0,0.717558542755448,0.213557388818567,0.211931901159562,0.600182192168805,0.103052529238439,0.257640540045629,0,0.675105328965065,0.0974370051611986,0.504867548488229,0.552299391853796,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0.232387885739037,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0.464367928031979,0,0.236613600079688,0,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0.882926198829301,0.245976877086227,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0.462985512576611,0.380508304469197,0.790204397959275,0,0.246217006087397,0.468008530278475,0.148631162288728,0,0.16798212819886,0,0,0,0,0.492663237895943,0.264145302039678,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.26593811658487,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0.112085143993527,0,0.215627574859517,0.256686072559497,0,0,0,0.502548796003046,1.27587750330633,0,0,0,0.12269149171914,0,0,0.623912584592421,0.535286966391485,0.157702415033935,0.35142424497814,0,0,0,0,0,0.260650843404249,0.195801157462741,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0.460385919864187,0,0.128139149255701,0,0,1.48418066444991,0,0,0.0821271560138091,0,0,0.483437798366489,0,0.0920809889358963,0,0,0.131124414959424,0.451199612907412,0.231046011313244,0.784349769176855,0,0.105551628892876,1.13733384070897,0,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0,0.256450125116389,0.328014645699706,0.325378394664303,0,0.0915694648183434,0.082509499920588,0,0,0,0,0.308097234229289,0.307007349452259,0.137836572484531,0.107420244868274,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.359744915166629,0.54907405947211,0.589062011728432,0,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0.865615277858669,0.213425530045242,0,0,0.191505370132367,0.635020748171649,0,0,0.456469358066384,0.47003968731907,2.50634477090067,0.338583555603207,0,0.605399121573143,0.425846237690326,1.37402137902306,0,0,0,0,0,0,0,0.66614393599564,0,0,0.293016358543788,0,0.111443384277478,0.284136146806413,0,0,0,0,0.281338832821026,0.222617410045812,0.329607748453519,0.844501632511974,1.39473591775749,0,0,0,0.123084805461069,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0.347249989866585,0,0.482385754501632,0,0.442317039724898,0,0.219385397153973,0,0,0.230850775511391,0,0.23056390438806,0,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0.216388639742091,0,0.0884575645033392,0,0.296521128680622,0.247127877893006,0.104421949505455,0.067401132980677,0.802577647298789,0,0.364909578431332,0,0.485560759068186,0.394584402849391,2.41981432097328,0.30607276163049,0.252746318513952,0,0.103688191397247,0,0.330991955875499,0.313932918407225,0,0,0.138674673013139,0,0,0,0.17472666824203,0.343972064943233,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0.189932387867636,0,0,0.426905989478705,0,0,0.114536596165916,0.514784993585894,0,0.248505071130865,0,0.135904206073614,0.313808538937,0.203996435272644,0.577901179803038,0,0.410716136675979,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0.223171457441873,0.0671834724867263,1.08089965062721,0,0.0787831823072236,0.0824158583811665,0,0,0.0846733320657845,0,0.136203406111576,0.803765742325096,0.137539436597234,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0.537862017998534,0,0,0,0,0,0.864221491201268,0,0,0.082092520749339,0.170388021785422,0,0,0,0.258565912723101,0.26446520348538,0.171086837884329,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.244052529803926,0,0,0,0.248385611765534,0.276697269872462,0.124980407962107,0.151649117541648,0,0.470531639396343,0,0.28984205722165,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0.265841714557995,1.04349012362347,0.450772826991655,0.380805212168795,0.406870733204662,1.09109195521536,0.107410557042488,0.464033759878494,0.398095888698616,1.60011105865261,0,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0.353378291891762,0,0.506827321959218,0.256241518587947,0.345430341731199,0.303859956177382,0.414775308455192,0.194860308839388,0,0,0,0.245772908753719,0,0,0,0.344429959321631,0,0,0,0,0.383683113910955,0.107824811396682,0,0.327628914576042,0.509197589862076,0.425149840203366,0.371807292777007,0,0.954013051960256,0.47317047000752,0,0,0.6124909547064,0.0642292250964595,0,0.798169295285756,0,0,0.0691572524642179,0.161475645631851,1.42769420259154,0,0.11796972334774,0,0.115525666150338,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0.202612753855184,0,0.826747186004736,0.19024743058172,1.09394961803644,0,0.992422356778588,0,0,1.07140367175657,0.336283722218824,0,0,0.0887023701626388,0,0,0.203909198930495,0.131545547125698,0,0.111231401892069,0.078493092850514,0.314231179832004,0,0,0,1.9110067515482,0,0.790068058663633,0,0,0,0,0.17071847709395,0,0,0,0,0.846774100381858,0,0,0,0.335566295393377,0.196300467230486,0,0,0,0,0.971421986118279,0.467878926924211,0,0,0,0.219881033490858,0,0.0771741581079447,0,0.470317296361523,0.490296643507811,0,0,0.297046400327086,0,0.339854229375634,0,0,0.199882311849858,0,0,0.0802413666891683,0,0,0.573358332605805,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0.218531143927391,0.126698501011437,0.101988829741982,0.26721740526556,0.18378979906969,0.250707539292375,0.151557396436479,0,0,0.310298987585686,0,0.23806443146374,0.0645889098360061,0,0.112131862580613,0,0,0,0,0.134704106029175,0.286888821570705,0,0,0.320182037633146,0,0.0898252021065869,0,0.611207220914332,0.406896178315738,0,0,0 | |phase1_expression=0,0.214100523890983,0,1.0007329835313,0,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.251085279189606,0.229240217243854,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0.568676929949686,0.293600439334847,1.10799081706375,0.401088894940283,0,0.447830948479849,0,0,0.145398238779565,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0.320929027076094,2.55734850319616,0,0,0,0,0.56738522469114,0.622822248995575,0.251248665256743,0,0,0,0,0,0,0,0.419317291016752,0.112328631146495,0.150176892841506,0,0.570025487482497,0.19891667719909,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0.790152254325231,0,0.786021525498329,0,0.668745981562712,0,0,0,0.334231370655521,0.589211814949674,0.221533894583621,0.812411591295047,1.40900451698243,3.38154303655683,0.328875809207352,0.552700035571697,1.15921234294021,0.296573126324121,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0.50133791063589,0,0,0.973269740605272,0.189069634328136,0.221729397462564,0.175669571386252,0.130979075497713,0,0,1.29818957461873,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0.286836620748814,0,0.560677600142307,0,0,0,0,0.163461903113459,0.151357427644931,0.576175924479999,0,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0.421352420106746,0.408308342509787,0.859840221182376,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0.505008341862199,0.125118519871964,0.277064115484183,0,0,0,0,0.717558542755448,0.213557388818567,0.211931901159562,0.600182192168805,0.103052529238439,0.257640540045629,0,0.675105328965065,0.0974370051611986,0.504867548488229,0.552299391853796,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0.232387885739037,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0.464367928031979,0,0.236613600079688,0,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0.882926198829301,0.245976877086227,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0.462985512576611,0.380508304469197,0.790204397959275,0,0.246217006087397,0.468008530278475,0.148631162288728,0,0.16798212819886,0,0,0,0,0.492663237895943,0.264145302039678,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.26593811658487,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0.112085143993527,0,0.215627574859517,0.256686072559497,0,0,0,0.502548796003046,1.27587750330633,0,0,0,0.12269149171914,0,0,0.623912584592421,0.535286966391485,0.157702415033935,0.35142424497814,0,0,0,0,0,0.260650843404249,0.195801157462741,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0.460385919864187,0,0.128139149255701,0,0,1.48418066444991,0,0,0.0821271560138091,0,0,0.483437798366489,0,0.0920809889358963,0,0,0.131124414959424,0.451199612907412,0.231046011313244,0.784349769176855,0,0.105551628892876,1.13733384070897,0,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0,0.256450125116389,0.328014645699706,0.325378394664303,0,0.0915694648183434,0.082509499920588,0,0,0,0,0.308097234229289,0.307007349452259,0.137836572484531,0.107420244868274,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.359744915166629,0.54907405947211,0.589062011728432,0,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0.865615277858669,0.213425530045242,0,0,0.191505370132367,0.635020748171649,0,0,0.456469358066384,0.47003968731907,2.50634477090067,0.338583555603207,0,0.605399121573143,0.425846237690326,1.37402137902306,0,0,0,0,0,0,0,0.66614393599564,0,0,0.293016358543788,0,0.111443384277478,0.284136146806413,0,0,0,0,0.281338832821026,0.222617410045812,0.329607748453519,0.844501632511974,1.39473591775749,0,0,0,0.123084805461069,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0.347249989866585,0,0.482385754501632,0,0.442317039724898,0,0.219385397153973,0,0,0.230850775511391,0,0.23056390438806,0,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0.216388639742091,0,0.0884575645033392,0,0.296521128680622,0.247127877893006,0.104421949505455,0.067401132980677,0.802577647298789,0,0.364909578431332,0,0.485560759068186,0.394584402849391,2.41981432097328,0.30607276163049,0.252746318513952,0,0.103688191397247,0,0.330991955875499,0.313932918407225,0,0,0.138674673013139,0,0,0,0.17472666824203,0.343972064943233,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0.189932387867636,0,0,0.426905989478705,0,0,0.114536596165916,0.514784993585894,0,0.248505071130865,0,0.135904206073614,0.313808538937,0.203996435272644,0.577901179803038,0,0.410716136675979,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0.223171457441873,0.0671834724867263,1.08089965062721,0,0.0787831823072236,0.0824158583811665,0,0,0.0846733320657845,0,0.136203406111576,0.803765742325096,0.137539436597234,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0.537862017998534,0,0,0,0,0,0.864221491201268,0,0,0.082092520749339,0.170388021785422,0,0,0,0.258565912723101,0.26446520348538,0.171086837884329,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.244052529803926,0,0,0,0.248385611765534,0.276697269872462,0.124980407962107,0.151649117541648,0,0.470531639396343,0,0.28984205722165,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0.265841714557995,1.04349012362347,0.450772826991655,0.380805212168795,0.406870733204662,1.09109195521536,0.107410557042488,0.464033759878494,0.398095888698616,1.60011105865261,0,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0.353378291891762,0,0.506827321959218,0.256241518587947,0.345430341731199,0.303859956177382,0.414775308455192,0.194860308839388,0,0,0,0.245772908753719,0,0,0,0.344429959321631,0,0,0,0,0.383683113910955,0.107824811396682,0,0.327628914576042,0.509197589862076,0.425149840203366,0.371807292777007,0,0.954013051960256,0.47317047000752,0,0,0.6124909547064,0.0642292250964595,0,0.798169295285756,0,0,0.0691572524642179,0.161475645631851,1.42769420259154,0,0.11796972334774,0,0.115525666150338,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0.202612753855184,0,0.826747186004736,0.19024743058172,1.09394961803644,0,0.992422356778588,0,0,1.07140367175657,0.336283722218824,0,0,0.0887023701626388,0,0,0.203909198930495,0.131545547125698,0,0.111231401892069,0.078493092850514,0.314231179832004,0,0,0,1.9110067515482,0,0.790068058663633,0,0,0,0,0.17071847709395,0,0,0,0,0.846774100381858,0,0,0,0.335566295393377,0.196300467230486,0,0,0,0,0.971421986118279,0.467878926924211,0,0,0,0.219881033490858,0,0.0771741581079447,0,0.470317296361523,0.490296643507811,0,0,0.297046400327086,0,0.339854229375634,0,0,0.199882311849858,0,0,0.0802413666891683,0,0,0.573358332605805,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0.218531143927391,0.126698501011437,0.101988829741982,0.26721740526556,0.18378979906969,0.250707539292375,0.151557396436479,0,0,0.310298987585686,0,0.23806443146374,0.0645889098360061,0,0.112131862580613,0,0,0,0,0.134704106029175,0.286888821570705,0,0,0.320182037633146,0,0.0898252021065869,0,0.611207220914332,0.406896178315738,0,0,0 | ||
|short_description=p@chr4:88932492..88932496,+ | |||
}} | }} |
Latest revision as of 07:53, 30 July 2015
Short description: | p@chr4:88932492..88932496, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:88932492..88932496, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 2.84e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.10e-10 | 1 |
cranial nerve | 3.10e-10 | 1 |
nerve trunk | 3.10e-10 | 1 |
nerve connecting eye with brain | 3.10e-10 | 1 |
nerve | 3.10e-10 | 1 |
retinal neural layer | 3.10e-10 | 1 |
presumptive neural retina | 3.10e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 8.99e-10 | 1 |