FFCP PHASE1:Hg19::chr5:169816462..169816506,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:169816462..169816506,+
|short_description=p1@ENST00000518387
|description=CAGE_peak_1_at_ENST00000518387_5end
|association_with_transcript=0bp_to_ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000518387_5end | |||
|cluster_id=chr5:169816462..169816506,+ | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_1_at_ENST00000518387_5end | |||
|id=chr5:169816462..169816506,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000453;6.97e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,7.18e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.21e-09;1!UBERON:0005754;2.21e-09;1!UBERON:0004874;2.93e-09;1!UBERON:0009143;4.54e-09;1!UBERON:0001045;8.49e-09;1!UBERON:0006603;6.99e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.55e-29!115;UBERON:0006947!1.21e-08!3;UBERON:0004054!1.21e-08!3;UBERON:0003135!5.48e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000059;4.84e-17;11!UBERON:0005409;2.51e-15;22!UBERON:0000160;1.06e-14;17!UBERON:0001155;1.37e-13;9!UBERON:0004921;2.41e-12;33!UBERON:0003135;1.02e-11;11!UBERON:0006947;1.15e-11;3!UBERON:0004054;1.15e-11;3!UBERON:0006834;1.60e-09;1!UBERON:0001000;2.21e-09;1!UBERON:0000998;2.21e-09;1!UBERON:0006868;2.21e-09;1!UBERON:0005352;2.21e-09;1!UBERON:0004175;2.68e-09;21!UBERON:0000989;2.93e-09;1!UBERON:0008811;2.93e-09;1!UBERON:0005795;4.54e-09;1!UBERON:0005904;5.76e-09;4!UBERON:0003101;7.89e-09;22!UBERON:0000079;7.89e-09;22!UBERON:0001154;8.49e-09;1!UBERON:0000996;8.49e-09;1!UBERON:0002146;8.49e-09;1!UBERON:0001153;8.49e-09;1!UBERON:0009854;8.49e-09;1!UBERON:0005623;8.49e-09;1!UBERON:0004907;5.47e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000059,3.82e-17,11;UBERON:0000160,9.64e-15,17;UBERON:0007023,1.78e-14,114;UBERON:0001155,1.20e-13,9;UBERON:0005409,1.63e-13,25;UBERON:0003135,1.06e-11,11;UBERON:0006947,1.21e-11,3;UBERON:0004054,1.21e-11,3;UBERON:0001046,5.84e-10,19;UBERON:0006834,1.60e-09,1;UBERON:0000998,2.22e-09,1;UBERON:0006868,2.22e-09,1;UBERON:0001000,2.40e-09,1;UBERON:0005352,2.40e-09,1;UBERON:0000989,3.05e-09,1;UBERON:0008811,3.05e-09,1;UBERON:0006258,3.05e-09,1;UBERON:0005876,3.05e-09,1;UBERON:0004874,3.05e-09,1;UBERON:0005904,5.99e-09,4;UBERON:0003101,8.30e-09,22;UBERON:0000079,8.30e-09,22;UBERON:0001154,8.49e-09,1;UBERON:0001153,8.49e-09,1;UBERON:0001045,8.49e-09,1;UBERON:0002146,9.91e-09,1;UBERON:0005623,9.91e-09,1;UBERON:0000996,1.07e-08,1;UBERON:0004175,9.48e-08,25;UBERON:0005156,1.93e-07,59;UBERON:0000990,1.93e-07,59;UBERON:0003133,3.07e-07,48;UBERON:0004907,5.00e-07,5;UBERON:0003064,8.45e-07,28 | |||
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| ||
|short_description=p1@ENST00000518387 | |||
}} | }} |
Latest revision as of 12:58, 30 July 2015
Short description: | p1@ENST00000518387 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000518387_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 0bp_to_ENST00000518387_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 7.18e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
large intestine | 3.82e-17 | 11 |
intestine | 9.64e-15 | 17 |
adult organism | 1.78e-14 | 114 |
colon | 1.20e-13 | 9 |
gastrointestinal system | 1.63e-13 | 25 |
male reproductive organ | 1.06e-11 | 11 |
male genital duct | 1.21e-11 | 3 |
internal male genitalia | 1.21e-11 | 3 |
hindgut | 5.84e-10 | 19 |
uterus or analog | 1.60e-09 | 1 |
seminal vesicle | 2.22e-09 | 1 |
seminal fluid secreting gland | 2.22e-09 | 1 |
vas deferens | 2.40e-09 | 1 |
spermatic cord | 2.40e-09 | 1 |
penis | 3.05e-09 | 1 |
intromittent organ | 3.05e-09 | 1 |
lateral plate mesenchyme | 3.05e-09 | 1 |
undifferentiated genital tubercle | 3.05e-09 | 1 |
somatopleure | 3.05e-09 | 1 |
duct of male reproductive system | 5.99e-09 | 4 |
male organism | 8.30e-09 | 22 |
male reproductive system | 8.30e-09 | 22 |
vermiform appendix | 8.49e-09 | 1 |
caecum | 8.49e-09 | 1 |
midgut | 8.49e-09 | 1 |
pulmonary valve | 9.91e-09 | 1 |
semi-lunar valve | 9.91e-09 | 1 |
vagina | 1.07e-08 | 1 |
internal genitalia | 9.48e-08 | 25 |
reproductive structure | 1.93e-07 | 59 |
reproductive system | 1.93e-07 | 59 |
reproductive organ | 3.07e-07 | 48 |
lower digestive tract | 5.00e-07 | 5 |
intermediate mesoderm | 8.45e-07 | 28 |