FFCP PHASE1:Hg19::chr6:148664333..148664338,-: Difference between revisions
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|id=chr6:148664333..148664338,-
|short_description=p@chr6:148664333..148664338,-
|description=CAGE_peak_at_chr6:148664333..148664338,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:148664333..148664338,- | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_at_chr6:148664333..148664338,- | |||
|id=chr6:148664333..148664338,- | |||
|ontology_enrichment_celltype=CL:0002139!1.70e-43!24;CL:0000115!6.98e-33!35;CL:0000071!3.77e-32!18;CL:0002546!3.77e-32!18;CL:0002078!1.85e-24!44;CL:0000213!1.12e-21!57;CL:0000215!1.12e-21!57;CL:1000413!3.40e-19!9;CL:0002544!2.54e-13!6;CL:0005020!7.65e-13!6;CL:0002138!7.65e-13!6;CL:0005022!7.65e-13!6;CL:0000076!2.37e-09!62;CL:0002543!6.15e-09!6;CL:0000066!1.24e-07!254;CL:0002144!1.28e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.96e-111;24!CL:0000071;3.96e-101;18!CL:0000115;1.15e-73;36!CL:1000413;7.55e-66;9!CL:0002078;5.39e-47;45!CL:0002544;4.72e-39;6!CL:0000213;5.22e-31;58!CL:0000215;5.22e-31;58!CL:0002144;2.77e-29;3!CL:0002545;4.67e-20;2!CL:0000076;6.40e-16;63!CL:0002543;2.18e-15;6!CL:0002138;8.72e-15;6!CL:0000540;1.21e-14;6!CL:0000404;1.21e-14;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.71e-111,24;CL:0000071,2.83e-101,18;CL:0002546,2.83e-101,18;CL:0000115,8.96e-83,36;CL:1000413,3.99e-66,9;CL:0002078,9.74e-66,45;CL:0000213,1.89e-50,58;CL:0000215,1.89e-50,58;CL:0002544,1.97e-39,6;CL:0002144,3.20e-29,3;CL:0000076,1.82e-27,63;CL:0000222,7.85e-23,121;CL:0002545,3.02e-20,2;CL:0002543,2.35e-15,6;CL:0005020,9.82e-15,6;CL:0002138,9.82e-15,6;CL:0005022,9.82e-15,6;CL:0000540,1.37e-14,6;CL:0000031,1.37e-14,6;CL:0000404,1.37e-14,6;CL:0002321,8.66e-14,250;CL:0000047,4.35e-11,8;CL:0000066,1.85e-09,253 | |||
|ontology_enrichment_development_v019=CL:0002546;3.96e-101;18!CL:0005022;8.72e-15;6!CL:0000031;1.21e-14;6!CL:0000222;3.43e-09;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.77e-32!18;UBERON:0004638!3.77e-32!18;UBERON:0004852!3.77e-32!18;UBERON:0000487!2.69e-25!22;UBERON:0006914!1.31e-21!25;UBERON:0003915!3.40e-19!9;UBERON:0004700!3.40e-19!9;UBERON:0001917!3.40e-19!9;UBERON:0000055!7.04e-14!69;UBERON:0002049!4.07e-12!79;UBERON:0007798!4.07e-12!79;UBERON:0001473!2.22e-09!8;UBERON:0004536!2.22e-09!8;UBERON:0006558!2.22e-09!8;UBERON:0001981!5.06e-09!60;UBERON:0007500!5.06e-09!60;UBERON:0004537!5.06e-09!60;UBERON:0006965!5.06e-09!60;UBERON:0001638!7.09e-08!9;UBERON:0003920!7.09e-08!9;UBERON:0004582!7.09e-08!9;UBERON:0001915!1.28e-07!3;UBERON:0001982!1.28e-07!3;UBERON:0004535!2.55e-07!110;UBERON:0002465!2.63e-07!10;UBERON:0001009!6.10e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.96e-101;18!UBERON:0001986;3.96e-101;18!UBERON:0004852;3.96e-101;18!UBERON:0000487;2.16e-82;22!UBERON:0006914;2.85e-72;25!UBERON:0003915;7.55e-66;9!UBERON:0004700;7.55e-66;9!UBERON:0001917;7.55e-66;9!UBERON:0000490;1.01e-51;33!UBERON:0010523;2.77e-29;3!UBERON:0001915;2.77e-29;3!UBERON:0001982;2.77e-29;3!UBERON:0000055;8.78e-23;65!UBERON:0007500;3.08e-20;56!UBERON:0001981;3.08e-20;56!UBERON:0004537;3.08e-20;56!UBERON:0005800;4.67e-20;2!UBERON:0001515;4.67e-20;2!UBERON:0002049;4.69e-18;75!UBERON:0007798;4.69e-18;75!UBERON:0003914;7.86e-15;74!UBERON:0001637;4.76e-13;42!UBERON:0003509;4.76e-13;42!UBERON:0004572;4.76e-13;42!UBERON:0001473;3.12e-11;8!UBERON:0004536;3.12e-11;8!UBERON:0006558;3.12e-11;8!UBERON:0000025;3.84e-11;93!UBERON:0000947;3.90e-11;21!UBERON:0010191;3.90e-11;21!UBERON:0001638;1.93e-10;9!UBERON:0003920;1.93e-10;9!UBERON:0004582;1.93e-10;9!UBERON:0001009;6.67e-10;112!UBERON:0004535;9.34e-10;109!UBERON:0002465;4.32e-09;10!UBERON:0004573;3.07e-07;33!UBERON:0004571;3.07e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.83e-101,18;UBERON:0001986,2.83e-101,18;UBERON:0004852,2.83e-101,18;UBERON:0000487,1.64e-82,22;UBERON:0006914,2.24e-72,25;UBERON:0003915,3.99e-66,9;UBERON:0004700,3.99e-66,9;UBERON:0001917,3.99e-66,9;UBERON:0000055,8.18e-38,68;UBERON:0002049,1.20e-32,78;UBERON:0007798,1.20e-32,78;UBERON:0007500,1.78e-29,59;UBERON:0001981,1.78e-29,59;UBERON:0004537,1.78e-29,59;UBERON:0006965,1.78e-29,59;UBERON:0010523,3.20e-29,3;UBERON:0001915,3.20e-29,3;UBERON:0001982,3.20e-29,3;UBERON:0004535,1.23e-22,109;UBERON:0001009,5.83e-22,112;UBERON:0004872,2.54e-20,83;UBERON:0005800,3.02e-20,2;UBERON:0001515,3.02e-20,2;UBERON:0003914,5.24e-16,117;UBERON:0001637,1.74e-13,42;UBERON:0003509,1.74e-13,42;UBERON:0004572,1.74e-13,42;UBERON:0000947,3.07e-11,21;UBERON:0010191,3.07e-11,21;UBERON:0001473,3.41e-11,8;UBERON:0004536,3.41e-11,8;UBERON:0006558,3.41e-11,8;UBERON:0001638,2.03e-10,9;UBERON:0003920,2.03e-10,9;UBERON:0004582,2.03e-10,9;UBERON:0000490,2.10e-10,148;UBERON:0004111,4.49e-10,240;UBERON:0002465,4.63e-09,10;UBERON:0000025,9.75e-09,192;UBERON:0003081,3.93e-08,203;UBERON:0004573,4.26e-07,33;UBERON:0004571,4.26e-07,33 | |||
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| ||
|short_description=p@chr6:148664333..148664338,- | |||
}} | }} |
Latest revision as of 20:42, 30 July 2015
Short description: | p@chr6:148664333..148664338, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:148664333..148664338, - |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.71e-111 | 24 |
blood vessel endothelial cell | 2.83e-101 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.83e-101 | 18 |
endothelial cell | 8.96e-83 | 36 |
endothelial cell of artery | 3.99e-66 | 9 |
meso-epithelial cell | 9.74e-66 | 45 |
lining cell | 1.89e-50 | 58 |
barrier cell | 1.89e-50 | 58 |
aortic endothelial cell | 1.97e-39 | 6 |
capillary endothelial cell | 3.20e-29 | 3 |
squamous epithelial cell | 1.82e-27 | 63 |
mesodermal cell | 7.85e-23 | 121 |
thoracic aorta endothelial cell | 3.02e-20 | 2 |
vein endothelial cell | 2.35e-15 | 6 |
lymphangioblast | 9.82e-15 | 6 |
endothelial cell of lymphatic vessel | 9.82e-15 | 6 |
vascular lymphangioblast | 9.82e-15 | 6 |
neuron | 1.37e-14 | 6 |
neuroblast | 1.37e-14 | 6 |
electrically signaling cell | 1.37e-14 | 6 |
embryonic cell | 8.66e-14 | 250 |
neuronal stem cell | 4.35e-11 | 8 |
epithelial cell | 1.85e-09 | 253 |