FFCP PHASE1:Hg19::chr12:6978028..6978039,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=7167 | |EntrezGene=7167 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=12009 | |HGNC=12009 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=395bp_to_ENST00000495834_5end | |association_with_transcript=395bp_to_ENST00000495834_5end | ||
|cluster_id=chr12:6978028..6978039,+ | |||
|coexpression_cluster_id=C3324 | |coexpression_cluster_id=C3324 | ||
|description=CAGE_peak_3_at_TPI1_5end | |description=CAGE_peak_3_at_TPI1_5end |
Latest revision as of 05:58, 20 September 2015
Short description: | p3@TPI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TPI1_5end |
Coexpression cluster: | C3324_Smooth_Tracheal_mucinous_Bronchial_chronic_iPS_testicular |
Association with transcript: | 395bp_to_ENST00000495834_5end |
EntrezGene: | TPI1 |
HGNC: | 12009 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@TPI1 |
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0.0
2.5
5.0
7.5
10.0
12.5
15.0
17.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.25e-11 | 32 |
electrically responsive cell | 1.33e-10 | 61 |
electrically active cell | 1.33e-10 | 61 |
muscle precursor cell | 1.72e-10 | 58 |
myoblast | 1.72e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.72e-10 | 58 |
smooth muscle cell | 4.85e-10 | 43 |
smooth muscle myoblast | 4.85e-10 | 43 |
muscle cell | 5.70e-10 | 55 |
embryonic cell | 1.93e-08 | 250 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 3.41e-14 | 78 |
paraxial mesoderm | 8.40e-13 | 72 |
presumptive paraxial mesoderm | 8.40e-13 | 72 |
dense mesenchyme tissue | 1.91e-12 | 73 |
somite | 2.65e-12 | 71 |
presomitic mesoderm | 2.65e-12 | 71 |
presumptive segmental plate | 2.65e-12 | 71 |
dermomyotome | 2.65e-12 | 71 |
trunk paraxial mesoderm | 2.65e-12 | 71 |
multilaminar epithelium | 1.42e-11 | 83 |
Showing 1 to 10 of 33 entries