FFCP PHASE1:Hg19::chr6:2876759..2876795,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:2876759..2876795,-
|short_description=p2@MGC39372
|description=CAGE_peak_2_at_MGC39372_5end
|association_with_transcript=-15bp_to_ENST00000420981,ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221756 | |EntrezGene=221756 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_ENST00000420981,ENST00000545177,NR_033851,uc003mud.2_5end | |||
|cluster_id=chr6:2876759..2876795,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_MGC39372_5end | |||
|id=chr6:2876759..2876795,- | |||
|ontology_enrichment_celltype=CL:0000860!1.79e-29!45;CL:0002057!2.09e-27!42;CL:0000766!1.89e-25!76;CL:0002009!1.54e-24!65;CL:0000557!7.42e-24!71;CL:0002194!3.29e-23!63;CL:0000576!3.29e-23!63;CL:0000040!3.29e-23!63;CL:0000559!3.29e-23!63;CL:0000839!7.06e-22!70;CL:0000763!8.04e-13!112;CL:0000049!8.04e-13!112;CL:0000738!2.05e-12!140;CL:0002087!4.27e-09!119;CL:0002031!7.48e-09!124;CL:0002139!3.64e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.46e-44;33!CL:0002057;1.46e-44;33!CL:0000473;5.78e-30;39!CL:0000234;5.78e-30;39!CL:0000576;9.48e-27;48!CL:0000766;5.41e-17;69!CL:0002393;3.59e-08;6!CL:0002397;3.59e-08;6!CL:0002139;5.19e-08;24!CL:0002087;2.46e-07;104!CL:0000763;3.69e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.01e-51,42;CL:0002057,5.01e-51,42;CL:0000473,3.95e-43,48;CL:0000234,3.95e-43,48;CL:0002009,7.94e-35,61;CL:0000766,4.58e-33,72;CL:0002194,4.01e-32,59;CL:0000576,4.01e-32,59;CL:0000040,4.01e-32,59;CL:0000559,4.01e-32,59;CL:0000557,1.15e-30,67;CL:0000839,1.49e-27,66;CL:0000763,1.39e-21,108;CL:0000049,1.39e-21,108;CL:0000738,2.71e-18,136;CL:0002087,6.23e-15,115;CL:0002031,7.10e-14,120;CL:0000037,2.63e-12,168;CL:0002032,8.47e-12,161;CL:0000837,8.47e-12,161;CL:0000988,4.81e-11,177;CL:0002139,4.86e-08,24 | |||
|ontology_enrichment_development_v019=CL:0002057;4.97e-38;42!CL:0000049;1.51e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.49e-20!112;UBERON:0002390!3.47e-19!102;UBERON:0003061!3.47e-19!102;UBERON:0002371!4.36e-19!80;UBERON:0001474!6.88e-17!86;UBERON:0002405!7.23e-17!115;UBERON:0004765!1.60e-12!101;UBERON:0001434!1.60e-12!101;UBERON:0003081!2.26e-12!216;UBERON:0002204!6.39e-10!167;UBERON:0000926!3.14e-09!448;UBERON:0004120!3.14e-09!448;UBERON:0006603!3.14e-09!448;UBERON:0001737!5.99e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.85e-16;9!UBERON:0001557;2.85e-16;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.15e-25,76;UBERON:0002405,3.77e-24,93;UBERON:0002193,5.68e-24,108;UBERON:0002390,1.65e-23,98;UBERON:0003061,1.65e-23,98;UBERON:0001474,5.96e-23,82;UBERON:0004765,4.64e-21,90;UBERON:0001434,8.15e-18,100;UBERON:0001737,3.83e-16,9;UBERON:0003081,2.21e-15,203;UBERON:0002204,1.61e-09,167;UBERON:0001557,5.91e-08,19 | |||
|phase1_expression=0.363356758541113,1.07050261945492,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,1.06978768047132,0.410502947249729,0.865818594450472,1.96682138424452,1.53531759238885,2.16742572642506,0,0,0,0,0,0,13.2958898047651,16.4446446925516,10.4165217943609,0,0.32389366601898,0.515151135268373,2.76256653681173,8.31327076115381,2.66842467306598,4.88100977501938,12.7462045286766,5.57471467611186,3.74000110018796,8.19714260893122,4.7296445977717,13.4450815487281,16.7826017731795,4.06279459783025,6.21199720490596,8.46009065179322,3.82029923556644,18.977201326996,16.3673803808808,12.7867425159808,4.28806690242731,9.57425556583833,2.98357325372886,17.412554317715,26.6671055604836,12.4564449799115,5.02497330513487,6.25779502104242,2.17188844705117,12.7133895553007,22.0966581592539,11.7091083353127,0.633765858935825,1.70083439972035,2.09658645508376,0,0.300353785683013,0,0.855038231223746,0.39783335439818,0.91332076882317,0,0,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0.382273228125229,0,5.04457706683382,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69490601792545,0.383587685530591,0.361439152384566,0,0.579386075843295,0,0,0.378139268656271,0.221729397462564,0.702678285545008,0.392937226493138,0,0,0.324547393654683,0.348259474598534,0.26591592103773,0.476981248610684,0,0.371457501329565,1.19257444420023,0,0,1.13061588384802,2.93649605346934,5.77747888074142,0.417989933073621,0.775250277507987,0,0.33472061276467,2.81980521976403,7.60272105718513,0.488124115096339,0,0,0.803697554556718,0.44905874525234,2.0270066486998,1.53316637465883,2.84779697870439,0.732806975721629,0,11.6334079244498,0,0,0,0.662045904066094,1.14734648299525,0.354668382198357,0,0,0,0.311211035399766,0.404132016209064,0.490385709340376,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0.300091096084402,0.103052529238439,0,0.37223371266318,0,0,0,0,0.161646056818812,0,0,0.169560592310488,0.773043412653187,0,0,0,0.132529768321485,0.348581828608555,0.310983165046111,0,0,0,0,0,0,0,3.07597680103594,3.54027849164014,3.37415441836875,5.29411069115491,5.01122721412534,4.03360052488864,3.91010793664477,3.72820783738158,3.07797725557112,0,0,0,0,0,0.982827216677626,0,0,0.614942192715568,0.514703430895577,0,0,0,0,0,0,1.44331342025273,0,0,3.89789408954899,3.70388410061289,1.52203321787679,0,0,0.492434012174795,0.468008530278475,0.594524649154913,0,0,0.425325291727159,0,0,0,0,0.792435906119034,0.207328115540772,0.144119953416961,0.50496973370552,0,0,0,0,0,0,0,0,1.74384027533312,0,0.129271715757778,0,0,0,0,0,0,0,0.57191197463259,0,0,0.325736184293735,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0.144781306667579,0.61642896765115,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0.749007023947182,0,3.31532410748828,0,1.00034104211935,0,0,0,0.157702415033935,0,0,0,0,0,0,0.347534457872331,0,0.343143423810856,0.206768026122887,3.8828556147351,2.02782359826544,0,0,0,0.496215615637554,0,0,0,0,0,1.48418066444991,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.846016147141356,0,0,0.229628896329213,0,0.262248829918848,0,0.231046011313244,1.56869953835371,2.92278449306521,2.32213583564327,0,0.340187410553031,0,0,0,0,0.254876273045038,0,0.447749509444357,0,0,0,0.328014645699706,0.325378394664303,0.206082023295445,0,0,0,0,0,0.580024309752732,0,0.15350367472613,0,0,0.145016693914229,0.255679882248303,0.801288320820636,0,0,0,0.10115778085555,0,0,0,0.924100740528266,0,0.869932992075073,1.8532421910392,0,0.372158369359667,0.632758849437452,0.190630193923825,0,0,0.636406495851874,0,0.719489830333259,0,0.117812402345686,0,0,1.68503382495592,0.48763373908959,3.41198885483798,1.05650146756755,0.136499911407986,0.141405431953713,0,0,0,0.438450885253763,0.578775534266688,0,0,0,0.281695602532241,0,0,0,0,0,0,0.75894634753143,0.349934720244983,0,2.01090682660736,0,0.0941438007767792,0,0,0,0,1.52234282769651,0.764637207142375,0.569647187174163,0.238231775457789,0.411362273086194,1.94541993357815,0,0.79312517629427,0,0,0.735120647943095,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.293016358543788,0,0,1.13654458722565,0,0,0,0,0.140669416410513,0,0,0,0.597743964753209,0,0,0,0.123084805461069,0,1.25815691606258,6.08671993897071,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.120596438625408,1.52581736317083,0.552896299656123,2.06883333267483,0.219385397153973,6.53630781113941,0,0.307801034015188,0,0,0,0,0,0.274792780205587,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0,0,1.46909527343233,0,0,0,0,0.611030144933625,0,0,0,0.606610196826093,0,0.937057782901357,0,0,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0.853828638089378,0,0,0.783939179315021,0.174118413160805,0,0,2.12863928835987,3.58137653722309,2.79192553980911,0.0969890164884194,0,0.225980740780532,0,0,0.50648636764703,0.782205530939212,2.32460578729448,0.213452994739353,0,0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| ||
|short_description=p2@MGC39372 | |||
}} | }} |
Latest revision as of 13:17, 17 September 2015
Short description: | p2@MGC39372 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MGC39372_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -15bp_to_ENST00000420981, ENST00000545177, NR_033851, uc003mud.2_5end |
EntrezGene: | MGC39372 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.01e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.01e-51 | 42 |
defensive cell | 3.95e-43 | 48 |
phagocyte | 3.95e-43 | 48 |
macrophage dendritic cell progenitor | 7.94e-35 | 61 |
myeloid leukocyte | 4.58e-33 | 72 |
monopoietic cell | 4.01e-32 | 59 |
monocyte | 4.01e-32 | 59 |
monoblast | 4.01e-32 | 59 |
promonocyte | 4.01e-32 | 59 |
granulocyte monocyte progenitor cell | 1.15e-30 | 67 |
myeloid lineage restricted progenitor cell | 1.49e-27 | 66 |
myeloid cell | 1.39e-21 | 108 |
common myeloid progenitor | 1.39e-21 | 108 |
leukocyte | 2.71e-18 | 136 |
nongranular leukocyte | 6.23e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 7.10e-14 | 120 |
hematopoietic stem cell | 2.63e-12 | 168 |
hematopoietic oligopotent progenitor cell | 8.47e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.47e-12 | 161 |
hematopoietic cell | 4.81e-11 | 177 |
endothelial cell of vascular tree | 4.86e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.15e-25 | 76 |
immune system | 3.77e-24 | 93 |
hemolymphoid system | 5.68e-24 | 108 |
hematopoietic system | 1.65e-23 | 98 |
blood island | 1.65e-23 | 98 |
bone element | 5.96e-23 | 82 |
skeletal element | 4.64e-21 | 90 |
skeletal system | 8.15e-18 | 100 |
larynx | 3.83e-16 | 9 |
lateral plate mesoderm | 2.21e-15 | 203 |
musculoskeletal system | 1.61e-09 | 167 |
upper respiratory tract | 5.91e-08 | 19 |